Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32493
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81134-9|CAB03452.1| 559|Caenorhabditis elegans Hypothetical pr... 104 3e-23
AL031635-12|CAA21045.1| 559|Caenorhabditis elegans Hypothetical... 104 3e-23
AJ270999-1|CAB71298.1| 559|Caenorhabditis elegans prolyl 4-hydr... 104 3e-23
U12762-1|AAA62207.1| 558|Caenorhabditis elegans prolyl 4-hydrox... 95 3e-20
Z69637-4|CAA93469.1| 539|Caenorhabditis elegans Hypothetical pr... 95 4e-20
AJ277376-1|CAB88202.1| 268|Caenorhabditis elegans prolyl 4-hydr... 69 3e-12
AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain, ... 35 0.030
Z68751-8|CAA92978.1| 1474|Caenorhabditis elegans Hypothetical pr... 32 0.21
Z68341-5|CAA92768.1| 1474|Caenorhabditis elegans Hypothetical pr... 32 0.21
AF230280-1|AAG16655.1| 1474|Caenorhabditis elegans SWI2/SNF2-lik... 32 0.21
AF125462-3|AAT68888.1| 1144|Caenorhabditis elegans Heavy chain, ... 32 0.21
Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical pr... 31 0.65
Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical pr... 30 0.85
Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical pr... 30 0.85
Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical pr... 30 0.85
Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical pr... 30 0.85
Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical pr... 30 0.85
Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical pr... 30 0.85
AF106582-2|AAC78213.1| 457|Caenorhabditis elegans Hypothetical ... 30 0.85
AF003151-20|AAK18920.2| 251|Caenorhabditis elegans Hypothetical... 30 0.85
U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction... 29 2.0
U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction... 29 2.0
U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction... 29 2.0
L13200-3|AAA28192.1| 304|Caenorhabditis elegans C.elegans chrom... 28 3.4
AL031632-2|CAA21005.2| 789|Caenorhabditis elegans Hypothetical ... 28 3.4
AF067608-15|AAO38679.1| 470|Caenorhabditis elegans Hypothetical... 28 3.4
AF067608-14|AAK95864.1| 551|Caenorhabditis elegans Hypothetical... 28 3.4
Z82096-2|CAB05032.1| 211|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z50742-5|CAA90618.2| 650|Caenorhabditis elegans Hypothetical pr... 28 4.6
U60979-1|AAC47277.1| 211|Caenorhabditis elegans CES-2 protein. 28 4.6
U28734-1|AAB52603.2| 397|Caenorhabditis elegans Hypothetical pr... 28 4.6
AL132895-3|CAC14400.1| 676|Caenorhabditis elegans Hypothetical ... 28 4.6
AF067216-8|AAN84852.1| 954|Caenorhabditis elegans Hypothetical ... 28 4.6
AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical ... 28 4.6
Z70783-10|CAC70122.1| 1037|Caenorhabditis elegans Hypothetical p... 27 6.0
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p... 27 6.0
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p... 27 6.0
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p... 27 6.0
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z47075-6|CAA87379.1| 538|Caenorhabditis elegans Hypothetical pr... 27 6.0
U88181-2|AAB42303.1| 491|Caenorhabditis elegans Dnaj domain (pr... 27 6.0
U88172-4|AAB42259.1| 224|Caenorhabditis elegans Hypothetical pr... 27 6.0
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 27 6.0
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 27 6.0
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 27 6.0
AL023844-11|CAA19525.3| 489|Caenorhabditis elegans Hypothetical... 27 6.0
AF500111-1|AAM27196.1| 538|Caenorhabditis elegans poly ADP-ribo... 27 6.0
Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z79603-5|CAB01891.1| 435|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical pr... 27 8.0
AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical ... 27 8.0
>Z81134-9|CAB03452.1| 559|Caenorhabditis elegans Hypothetical
protein Y47D3B.10 protein.
Length = 559
Score = 104 bits (250), Expect = 3e-23
Identities = 64/172 (37%), Positives = 94/172 (54%), Gaps = 1/172 (0%)
Frame = +2
Query: 2 NDKDYTNALAWMKEALRKYKDENVMYPFTEV-DILEYIGFAYYLNGDVKTALEWTQRLLS 178
N+ D+ + + WM+EA R+ DE + P EV DILEY+ FA Y ++K AL+ T+ L
Sbjct: 175 NEHDFYHTVMWMEEAQRRLGDE--VEPTVEVEDILEYLAFALYKQNNLKHALKLTEELYK 232
Query: 179 VDPKHVRARGNIPHYQKTIAEQEAELKKQQRGETSDEPEEEDGQDYELSEYAKERKVYES 358
++P H RA+GN+ Y+ + EQE + R P + D L ER +YE+
Sbjct: 233 MNPTHPRAKGNVKWYE-DLLEQEGVRRSDMRKNL--PPIQNRRPDSVLGN--TERTMYEA 287
Query: 359 LCRGEMEIPHEITKRLKCWYVTDTHPFLKLAPIKVEQMYVKPDIFMFHEVMT 514
LCR E+ + + RL C+Y D PFL APIKVE P +F +V++
Sbjct: 288 LCRNEVPVSQKDISRLYCYYKRD-RPFLVYAPIKVEIKRFNPLAVLFKDVIS 338
>AL031635-12|CAA21045.1| 559|Caenorhabditis elegans Hypothetical
protein Y47D3B.10 protein.
Length = 559
Score = 104 bits (250), Expect = 3e-23
Identities = 64/172 (37%), Positives = 94/172 (54%), Gaps = 1/172 (0%)
Frame = +2
Query: 2 NDKDYTNALAWMKEALRKYKDENVMYPFTEV-DILEYIGFAYYLNGDVKTALEWTQRLLS 178
N+ D+ + + WM+EA R+ DE + P EV DILEY+ FA Y ++K AL+ T+ L
Sbjct: 175 NEHDFYHTVMWMEEAQRRLGDE--VEPTVEVEDILEYLAFALYKQNNLKHALKLTEELYK 232
Query: 179 VDPKHVRARGNIPHYQKTIAEQEAELKKQQRGETSDEPEEEDGQDYELSEYAKERKVYES 358
++P H RA+GN+ Y+ + EQE + R P + D L ER +YE+
Sbjct: 233 MNPTHPRAKGNVKWYE-DLLEQEGVRRSDMRKNL--PPIQNRRPDSVLGN--TERTMYEA 287
Query: 359 LCRGEMEIPHEITKRLKCWYVTDTHPFLKLAPIKVEQMYVKPDIFMFHEVMT 514
LCR E+ + + RL C+Y D PFL APIKVE P +F +V++
Sbjct: 288 LCRNEVPVSQKDISRLYCYYKRD-RPFLVYAPIKVEIKRFNPLAVLFKDVIS 338
>AJ270999-1|CAB71298.1| 559|Caenorhabditis elegans prolyl
4-hydroxylase alpha subunit1 protein.
Length = 559
Score = 104 bits (250), Expect = 3e-23
Identities = 64/172 (37%), Positives = 94/172 (54%), Gaps = 1/172 (0%)
Frame = +2
Query: 2 NDKDYTNALAWMKEALRKYKDENVMYPFTEV-DILEYIGFAYYLNGDVKTALEWTQRLLS 178
N+ D+ + + WM+EA R+ DE + P EV DILEY+ FA Y ++K AL+ T+ L
Sbjct: 175 NEHDFYHTVMWMEEAQRRLGDE--VEPTVEVEDILEYLAFALYKQNNLKHALKLTEELYK 232
Query: 179 VDPKHVRARGNIPHYQKTIAEQEAELKKQQRGETSDEPEEEDGQDYELSEYAKERKVYES 358
++P H RA+GN+ Y+ + EQE + R P + D L ER +YE+
Sbjct: 233 MNPTHPRAKGNVKWYE-DLLEQEGVRRSDMRKNL--PPIQNRRPDSVLGN--TERTMYEA 287
Query: 359 LCRGEMEIPHEITKRLKCWYVTDTHPFLKLAPIKVEQMYVKPDIFMFHEVMT 514
LCR E+ + + RL C+Y D PFL APIKVE P +F +V++
Sbjct: 288 LCRNEVPVSQKDISRLYCYYKRD-RPFLVYAPIKVEIKRFNPLAVLFKDVIS 338
>U12762-1|AAA62207.1| 558|Caenorhabditis elegans prolyl
4-hydroxylase alpha subunit protein.
Length = 558
Score = 95.1 bits (226), Expect = 3e-20
Identities = 62/172 (36%), Positives = 92/172 (53%), Gaps = 1/172 (0%)
Frame = +2
Query: 2 NDKDYTNALAWMKEALRKYKDENVMYPFTEV-DILEYIGFAYYLNGDVKTALEWTQRLLS 178
N+ D+ + + WM+EA R+ DE + P EV DILEY+ FA Y ++K AL+ T+ L
Sbjct: 175 NEHDFYHTVMWMEEAQRRLGDE--VEPTVEVEDILEYLAFALYKQNNLKHALKLTEELYK 232
Query: 179 VDPKHVRARGNIPHYQKTIAEQEAELKKQQRGETSDEPEEEDGQDYELSEYAKERKVYES 358
++P H RA+GN+ Y+ + EQE + R P + D L ER +YE+
Sbjct: 233 MNPTHPRAKGNVKWYE-DLLEQEGVRRSDMRKNL--PPIQNRRPDSVLGN--TERTMYEA 287
Query: 359 LCRGEMEIPHEITKRLKCWYVTDTHPFLKLAPIKVEQMYVKPDIFMFHEVMT 514
LCR E+ + RL C+Y+ FL APIKVE P +F +V++
Sbjct: 288 LCRNEVPVSRR-HLRLYCYYLAGP-SFLVYAPIKVEIKRFNPLAVLFKDVIS 337
>Z69637-4|CAA93469.1| 539|Caenorhabditis elegans Hypothetical
protein F35G2.4 protein.
Length = 539
Score = 94.7 bits (225), Expect = 4e-20
Identities = 62/171 (36%), Positives = 91/171 (53%), Gaps = 1/171 (0%)
Frame = +2
Query: 2 NDKDYTNALAWMKEALRKYKDENVMYPFTEVDILEYIGFAYYLNGDVKTALEWTQRLLSV 181
N KDY + L WM+ AL K ++EN E +ILEY+ ++ Y G+V+ AL T+RL +
Sbjct: 177 NQKDYYHCLMWMQVALVKIENENPP-TIEEWEILEYLAYSLYQQGNVRRALSLTKRLAKI 235
Query: 182 DPKHVRARGNIPHYQKTIAEQEAELKKQQRGETSDEPEEEDGQDYELSEYAKERKVYESL 361
P H RA+GN+ Y+ + K G+ P +Y+ ER YE+L
Sbjct: 236 APNHPRAKGNVKWYEDMLQG------KDMVGDLP--PIVNKRVEYD---GIVERDAYEAL 284
Query: 362 CRGEME-IPHEITKRLKCWYVTDTHPFLKLAPIKVEQMYVKPDIFMFHEVM 511
CRGE+ + + +L+C+ D PFLKLAPIKVE + P +F V+
Sbjct: 285 CRGEIPPVEPKWKNKLRCYLKRDK-PFLKLAPIKVEILRFDPLAVLFKNVI 334
>AJ277376-1|CAB88202.1| 268|Caenorhabditis elegans prolyl
4-hydroxylase alpha subunit1 protein.
Length = 268
Score = 68.5 bits (160), Expect = 3e-12
Identities = 36/91 (39%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Frame = +2
Query: 2 NDKDYTNALAWMKEALRKYKDENVMYPFTEV-DILEYIGFAYYLNGDVKTALEWTQRLLS 178
N+ D+ + + WM+EA R+ DE + P EV DILEY+ FA Y ++K AL+ T+ L
Sbjct: 175 NEHDFYHTVMWMEEAQRRLGDE--VEPTVEVEDILEYLAFALYKQNNLKHALKLTEELYK 232
Query: 179 VDPKHVRARGNIPHYQKTIAEQEAELKKQQR 271
++P H RA+GN+ Y+ + EQE + R
Sbjct: 233 MNPTHPRAKGNVKWYE-DLLEQEGVRRSDMR 262
>AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 8, isoform a protein.
Length = 1219
Score = 35.1 bits (77), Expect = 0.030
Identities = 31/115 (26%), Positives = 52/115 (45%)
Frame = +2
Query: 65 ENVMYPFTEVDILEYIGFAYYLNGDVKTALEWTQRLLSVDPKHVRARGNIPHYQKTIAEQ 244
E +++ E +Y A+ D++ + + S + +A HY K +
Sbjct: 874 EKILFRLNEHSRAKYTSSAHSTIRDLEKLVSHIKLTTSANDHFEKAENAYEHYVKRVDSM 933
Query: 245 EAELKKQQRGETSDEPEEEDGQDYELSEYAKERKVYESLCRGEMEIPHEITKRLK 409
A+LKKQQ+ SDE E + + E E KER E+ + E E EI ++L+
Sbjct: 934 IADLKKQQK---SDELAEIERKRRESEE--KERLEIEA--KKEAERQREIKRKLE 981
>Z68751-8|CAA92978.1| 1474|Caenorhabditis elegans Hypothetical
protein F01G4.1 protein.
Length = 1474
Score = 32.3 bits (70), Expect = 0.21
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +2
Query: 215 PHYQKTIAEQEAELKKQQRGETSDEPEEEDGQDYE-LSEYAKERKVYESLCRGEMEIPHE 391
P Y+ +Q ++ ++++ E EPEEE Y + E K + + E E E +
Sbjct: 439 PEYEIVPRDQLSDDEEEEEEEAPVEPEEEKDDQYAGMDEETKAKMILEKARNEEDEYDQK 498
Query: 392 ITKRLKCWYVT 424
K++ +Y T
Sbjct: 499 TKKQMADYYAT 509
>Z68341-5|CAA92768.1| 1474|Caenorhabditis elegans Hypothetical
protein F01G4.1 protein.
Length = 1474
Score = 32.3 bits (70), Expect = 0.21
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +2
Query: 215 PHYQKTIAEQEAELKKQQRGETSDEPEEEDGQDYE-LSEYAKERKVYESLCRGEMEIPHE 391
P Y+ +Q ++ ++++ E EPEEE Y + E K + + E E E +
Sbjct: 439 PEYEIVPRDQLSDDEEEEEEEAPVEPEEEKDDQYAGMDEETKAKMILEKARNEEDEYDQK 498
Query: 392 ITKRLKCWYVT 424
K++ +Y T
Sbjct: 499 TKKQMADYYAT 509
>AF230280-1|AAG16655.1| 1474|Caenorhabditis elegans SWI2/SNF2-like
protein protein.
Length = 1474
Score = 32.3 bits (70), Expect = 0.21
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +2
Query: 215 PHYQKTIAEQEAELKKQQRGETSDEPEEEDGQDYE-LSEYAKERKVYESLCRGEMEIPHE 391
P Y+ +Q ++ ++++ E EPEEE Y + E K + + E E E +
Sbjct: 439 PEYEIVPRDQLSDDEEEEEEEAPVEPEEEKDDQYAGMDEETKAKMILEKARNEEDEYDQK 498
Query: 392 ITKRLKCWYVT 424
K++ +Y T
Sbjct: 499 TKKQMADYYAT 509
>AF125462-3|AAT68888.1| 1144|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 8, isoform b protein.
Length = 1144
Score = 32.3 bits (70), Expect = 0.21
Identities = 21/94 (22%), Positives = 38/94 (40%)
Frame = +2
Query: 65 ENVMYPFTEVDILEYIGFAYYLNGDVKTALEWTQRLLSVDPKHVRARGNIPHYQKTIAEQ 244
E +++ E +Y A+ D++ + + S + +A HY K +
Sbjct: 874 EKILFRLNEHSRAKYTSSAHSTIRDLEKLVSHIKLTTSANDHFEKAENAYEHYVKRVDSM 933
Query: 245 EAELKKQQRGETSDEPEEEDGQDYELSEYAKERK 346
A+LKKQQ+ + E E + + E E K
Sbjct: 934 IADLKKQQKSDELAEIERKRRESEEKERLEIEAK 967
>Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical
protein F58G6.1 protein.
Length = 461
Score = 30.7 bits (66), Expect = 0.65
Identities = 22/72 (30%), Positives = 37/72 (51%)
Frame = +2
Query: 224 QKTIAEQEAELKKQQRGETSDEPEEEDGQDYELSEYAKERKVYESLCRGEMEIPHEITKR 403
Q AEQ K+++ E S+ ++ED + E+ E A ++K E + I +E KR
Sbjct: 341 QTAAAEQAIAAAKREKKEASNPFDDEDDESTEVEE-APKKKDPEPTPKPLDGITNE--KR 397
Query: 404 LKCWYVTDTHPF 439
++VT TH +
Sbjct: 398 KTLYFVTSTHNY 409
>Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical protein
ZK270.2e protein.
Length = 4541
Score = 30.3 bits (65), Expect = 0.85
Identities = 15/54 (27%), Positives = 31/54 (57%)
Frame = +2
Query: 152 LEWTQRLLSVDPKHVRARGNIPHYQKTIAEQEAELKKQQRGETSDEPEEEDGQD 313
LE T + + V+ + N+ H+ ++I + K+Q++ + S EPE++D Q+
Sbjct: 3910 LEETSKSVDVEETPISVYSNVYHHGESIRVE----KRQRKAKISAEPEKDDDQE 3959
>Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical protein
ZK270.2d protein.
Length = 4648
Score = 30.3 bits (65), Expect = 0.85
Identities = 15/54 (27%), Positives = 31/54 (57%)
Frame = +2
Query: 152 LEWTQRLLSVDPKHVRARGNIPHYQKTIAEQEAELKKQQRGETSDEPEEEDGQD 313
LE T + + V+ + N+ H+ ++I + K+Q++ + S EPE++D Q+
Sbjct: 3899 LEETSKSVDVEETPISVYSNVYHHGESIRVE----KRQRKAKISAEPEKDDDQE 3948
>Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical protein
ZK270.2a protein.
Length = 4530
Score = 30.3 bits (65), Expect = 0.85
Identities = 15/54 (27%), Positives = 31/54 (57%)
Frame = +2
Query: 152 LEWTQRLLSVDPKHVRARGNIPHYQKTIAEQEAELKKQQRGETSDEPEEEDGQD 313
LE T + + V+ + N+ H+ ++I + K+Q++ + S EPE++D Q+
Sbjct: 3899 LEETSKSVDVEETPISVYSNVYHHGESIRVE----KRQRKAKISAEPEKDDDQE 3948
>Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical protein
ZK270.2e protein.
Length = 4541
Score = 30.3 bits (65), Expect = 0.85
Identities = 15/54 (27%), Positives = 31/54 (57%)
Frame = +2
Query: 152 LEWTQRLLSVDPKHVRARGNIPHYQKTIAEQEAELKKQQRGETSDEPEEEDGQD 313
LE T + + V+ + N+ H+ ++I + K+Q++ + S EPE++D Q+
Sbjct: 3910 LEETSKSVDVEETPISVYSNVYHHGESIRVE----KRQRKAKISAEPEKDDDQE 3959
>Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical protein
ZK270.2d protein.
Length = 4648
Score = 30.3 bits (65), Expect = 0.85
Identities = 15/54 (27%), Positives = 31/54 (57%)
Frame = +2
Query: 152 LEWTQRLLSVDPKHVRARGNIPHYQKTIAEQEAELKKQQRGETSDEPEEEDGQD 313
LE T + + V+ + N+ H+ ++I + K+Q++ + S EPE++D Q+
Sbjct: 3899 LEETSKSVDVEETPISVYSNVYHHGESIRVE----KRQRKAKISAEPEKDDDQE 3948
>Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical protein
ZK270.2a protein.
Length = 4530
Score = 30.3 bits (65), Expect = 0.85
Identities = 15/54 (27%), Positives = 31/54 (57%)
Frame = +2
Query: 152 LEWTQRLLSVDPKHVRARGNIPHYQKTIAEQEAELKKQQRGETSDEPEEEDGQD 313
LE T + + V+ + N+ H+ ++I + K+Q++ + S EPE++D Q+
Sbjct: 3899 LEETSKSVDVEETPISVYSNVYHHGESIRVE----KRQRKAKISAEPEKDDDQE 3948
>AF106582-2|AAC78213.1| 457|Caenorhabditis elegans Hypothetical
protein W05F2.2 protein.
Length = 457
Score = 30.3 bits (65), Expect = 0.85
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +2
Query: 197 RARGNIPHYQKTIAEQEAELKKQQRGETSDEPEEED 304
+AR ++++ IAEQ A K++++ + E EEED
Sbjct: 134 KAREQKKYFEELIAEQMAARKREEQDDQQHEDEEED 169
>AF003151-20|AAK18920.2| 251|Caenorhabditis elegans Hypothetical
protein D1007.16 protein.
Length = 251
Score = 30.3 bits (65), Expect = 0.85
Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
Frame = +2
Query: 161 TQRLLSVDPKHVRARGNIPHYQKTIAEQEAELKKQQRGETSDEPEEEDG---QDYELSEY 331
T+ L + +R N + E++A+++KQ + +TSD + DG D +
Sbjct: 120 TELALKRGIERLRTSSNNQRSGPSSPEEKAKIQKQMQRDTSDSSSDSDGSSDSDKSNGDS 179
Query: 332 AKERKVYESLCRGEMEIPHEITKR 403
+ + E + EM+ P T+R
Sbjct: 180 SDDEDESEKILLEEMKKPKPYTER 203
>U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction
molecule protein1, isoform c protein.
Length = 1148
Score = 29.1 bits (62), Expect = 2.0
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +2
Query: 161 TQRLLSVDPKHVRARGNIPHYQKTIAEQEAELKKQQRGETSDEPEEEDGQDYELSEY-AK 337
++R D H+R+R + I E E E+ + Q +T EP ++ ++ +SEY +
Sbjct: 981 SRRESPADQAHIRSRSADYLMDRRIRE-ETEVPENQLQKTRVEPHDQSPRESRISEYEMR 1039
Query: 338 ERKVYESL 361
RK E L
Sbjct: 1040 FRKSTEKL 1047
>U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction
molecule protein1, isoform d protein.
Length = 1439
Score = 29.1 bits (62), Expect = 2.0
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +2
Query: 161 TQRLLSVDPKHVRARGNIPHYQKTIAEQEAELKKQQRGETSDEPEEEDGQDYELSEY-AK 337
++R D H+R+R + I E E E+ + Q +T EP ++ ++ +SEY +
Sbjct: 940 SRRESPADQAHIRSRSADYLMDRRIRE-ETEVPENQLQKTRVEPHDQSPRESRISEYEMR 998
Query: 338 ERKVYESL 361
RK E L
Sbjct: 999 FRKSTEKL 1006
>U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction
molecule protein1, isoform a protein.
Length = 1480
Score = 29.1 bits (62), Expect = 2.0
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +2
Query: 161 TQRLLSVDPKHVRARGNIPHYQKTIAEQEAELKKQQRGETSDEPEEEDGQDYELSEY-AK 337
++R D H+R+R + I E E E+ + Q +T EP ++ ++ +SEY +
Sbjct: 981 SRRESPADQAHIRSRSADYLMDRRIRE-ETEVPENQLQKTRVEPHDQSPRESRISEYEMR 1039
Query: 338 ERKVYESL 361
RK E L
Sbjct: 1040 FRKSTEKL 1047
>L13200-3|AAA28192.1| 304|Caenorhabditis elegans C.elegans
chromodomain proteinprotein 1 protein.
Length = 304
Score = 28.3 bits (60), Expect = 3.4
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +2
Query: 182 DPKHVRARGNIPHYQKTIAEQEAELKKQQRGETSDEPEEE---DGQDYELSEYAKERKVY 352
D +H A + E + E +++ E +EPEEE +G+D E S+ ++ K
Sbjct: 129 DEEHSSADKKSKAEDEEEVEDDEEPVPKKKKEVQEEPEEEESVEGEDEEESQEVEDLKED 188
Query: 353 ESLCRGEMEIPHEI 394
E + E E ++
Sbjct: 189 EKMEEDEKEEEEDV 202
>AL031632-2|CAA21005.2| 789|Caenorhabditis elegans Hypothetical
protein Y32B12B.2 protein.
Length = 789
Score = 28.3 bits (60), Expect = 3.4
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +2
Query: 239 EQEAELKKQQRGETSDEPEEEDGQDYELSEYAKERKVYESL 361
E E ELK ++ G DE E DG+D E + +E E L
Sbjct: 708 EDEDELKDRKHGLFDDEASESDGED-EFEDEDEEEPEGEDL 747
>AF067608-15|AAO38679.1| 470|Caenorhabditis elegans Hypothetical
protein B0511.14b protein.
Length = 470
Score = 28.3 bits (60), Expect = 3.4
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
Frame = +2
Query: 176 SVDPKHVRARGN----IPHYQKTIAEQEAELKKQQRG-ETSDEPEEED 304
S DP +R +G + HY + I E+ ++K Q G E DE EE+D
Sbjct: 320 SSDPT-IRKKGKTDEQLDHYHEKIREKYRNIQKIQEGVEEEDEDEEDD 366
>AF067608-14|AAK95864.1| 551|Caenorhabditis elegans Hypothetical
protein B0511.14a protein.
Length = 551
Score = 28.3 bits (60), Expect = 3.4
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
Frame = +2
Query: 176 SVDPKHVRARGN----IPHYQKTIAEQEAELKKQQRG-ETSDEPEEED 304
S DP +R +G + HY + I E+ ++K Q G E DE EE+D
Sbjct: 320 SSDPT-IRKKGKTDEQLDHYHEKIREKYRNIQKIQEGVEEEDEDEEDD 366
>Z82096-2|CAB05032.1| 211|Caenorhabditis elegans Hypothetical
protein ZK909.4 protein.
Length = 211
Score = 27.9 bits (59), Expect = 4.6
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +1
Query: 127 FKRRRQNRSGMDSETSVRRSEARTSAGQHTALSEDDSRTRGRI 255
F+RRR+N RR + A + AL ++ + RG++
Sbjct: 120 FERRRKNNDAAKRSRDARRQKEEQIASKAHALERENMQLRGKV 162
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
protein F36F2.3a protein.
Length = 1128
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +2
Query: 188 KHVRARGNIPHYQKTIAEQEAELKKQQRGETSDEPEEEDGQDYELSEYAKERK 346
KH R + ++ ++ + KK+++ + E+ED D E E KERK
Sbjct: 778 KHHRKEEDGDEDEERKRKKHKKHKKEKKSKKEKRDEDEDDLDTEKKEKKKERK 830
>Z50742-5|CAA90618.2| 650|Caenorhabditis elegans Hypothetical
protein K09A11.5 protein.
Length = 650
Score = 27.9 bits (59), Expect = 4.6
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +2
Query: 227 KTIAEQEAELKKQQRGETSDEPEEEDGQDYELSEYAKERKVYESLCRGEMEIPHE--ITK 400
K I E+ ++ + RGE S ++ + D +Y +++ RGE+ H +
Sbjct: 13 KKIKEELTDMTPKMRGECSSSSQDHESDDDAEWDYKEQKACCICARRGEVLWCHSCPASF 72
Query: 401 RLKC-WYVTDTHP 436
+KC Y TD P
Sbjct: 73 HIKCLGYDTDPQP 85
>U60979-1|AAC47277.1| 211|Caenorhabditis elegans CES-2 protein.
Length = 211
Score = 27.9 bits (59), Expect = 4.6
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +1
Query: 127 FKRRRQNRSGMDSETSVRRSEARTSAGQHTALSEDDSRTRGRI 255
F+RRR+N RR + A + AL ++ + RG++
Sbjct: 120 FERRRKNNDAAKRSRDARRQKEEQIASKAHALERENMQLRGKV 162
>U28734-1|AAB52603.2| 397|Caenorhabditis elegans Hypothetical
protein C53C9.2 protein.
Length = 397
Score = 27.9 bits (59), Expect = 4.6
Identities = 16/65 (24%), Positives = 31/65 (47%)
Frame = +2
Query: 161 TQRLLSVDPKHVRARGNIPHYQKTIAEQEAELKKQQRGETSDEPEEEDGQDYELSEYAKE 340
+ R +D + V+A + + E+E E K ++ +E EEE+ ++ E E +E
Sbjct: 327 SSRQSEIDSQSVKASEPVEPEPEEEEEEEEEEKIEEPAAKEEEEEEEEEEEEEEEELEEE 386
Query: 341 RKVYE 355
+ E
Sbjct: 387 EEEEE 391
>AL132895-3|CAC14400.1| 676|Caenorhabditis elegans Hypothetical
protein Y59A8A.3 protein.
Length = 676
Score = 27.9 bits (59), Expect = 4.6
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +2
Query: 227 KTIA-EQEAELKKQQRGETSDEPEEEDGQDYELSEYAKERKVYESLCRGEMEIPHEITKR 403
KTI E EA+L+K+Q + E ++ +SE ++ + L + E+ K+
Sbjct: 296 KTIRKEHEAQLQKKQEEWKKLHEQLEQEKEKLISEKEHAKQTHLKLAAAVENVEAELEKQ 355
Query: 404 LKCWYVTDTH 433
K W TH
Sbjct: 356 GKEWIQLSTH 365
>AF067216-8|AAN84852.1| 954|Caenorhabditis elegans Hypothetical
protein C35E7.5b protein.
Length = 954
Score = 27.9 bits (59), Expect = 4.6
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 221 YQKTIAEQEAELKKQQRGETSDEPEEEDGQDYELSEYAKERK 346
Y+ E+ E + ++ E S+E E+E+ + E SEY E +
Sbjct: 888 YEDEDEEESEEDEDEEEDEDSEEDEDEEEYEDEESEYEDEEE 929
>AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical
protein C35E7.5a protein.
Length = 1262
Score = 27.9 bits (59), Expect = 4.6
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 221 YQKTIAEQEAELKKQQRGETSDEPEEEDGQDYELSEYAKERK 346
Y+ E+ E + ++ E S+E E+E+ + E SEY E +
Sbjct: 888 YEDEDEEESEEDEDEEEDEDSEEDEDEEEYEDEESEYEDEEE 929
>Z70783-10|CAC70122.1| 1037|Caenorhabditis elegans Hypothetical
protein ZK856.13 protein.
Length = 1037
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2
Query: 275 ETSDEPEEEDGQDYELSEYAKE 340
+T+D+ EEED +D EL E +E
Sbjct: 131 DTADDDEEEDDEDVELMEDVEE 152
>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 239 EQEAELKKQQRGETSDEPEEEDGQDYELSEYAKERKVY 352
E+E + +Q GE E EE+D + E SE + + Y
Sbjct: 228 EEEGAEEDEQSGEKDPEEEEDDSSNAESSEESTAPRQY 265
>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 239 EQEAELKKQQRGETSDEPEEEDGQDYELSEYAKERKVY 352
E+E + +Q GE E EE+D + E SE + + Y
Sbjct: 226 EEEGAEEDEQSGEKDPEEEEDDSSNAESSEESTAPRQY 263
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 239 EQEAELKKQQRGETSDEPEEEDGQDYELSEYAKERKVY 352
E+E + +Q GE E EE+D + E SE + + Y
Sbjct: 228 EEEGAEEDEQSGEKDPEEEEDDSSNAESSEESTAPRQY 265
>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 239 EQEAELKKQQRGETSDEPEEEDGQDYELSEYAKERKVY 352
E+E + +Q GE E EE+D + E SE + + Y
Sbjct: 228 EEEGAEEDEQSGEKDPEEEEDDSSNAESSEESTAPRQY 265
>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 239 EQEAELKKQQRGETSDEPEEEDGQDYELSEYAKERKVY 352
E+E + +Q GE E EE+D + E SE + + Y
Sbjct: 226 EEEGAEEDEQSGEKDPEEEEDDSSNAESSEESTAPRQY 263
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 239 EQEAELKKQQRGETSDEPEEEDGQDYELSEYAKERKVY 352
E+E + +Q GE E EE+D + E SE + + Y
Sbjct: 228 EEEGAEEDEQSGEKDPEEEEDDSSNAESSEESTAPRQY 265
>Z47075-6|CAA87379.1| 538|Caenorhabditis elegans Hypothetical
protein E02H1.4 protein.
Length = 538
Score = 27.5 bits (58), Expect = 6.0
Identities = 25/114 (21%), Positives = 50/114 (43%)
Frame = +2
Query: 143 KTALEWTQRLLSVDPKHVRARGNIPHYQKTIAEQEAELKKQQRGETSDEPEEEDGQDYEL 322
KT L W +R D + V + + + E E+KK++ E + +E++ + +
Sbjct: 77 KTHLHWEER----DDEPVPNKYAVVELATNARQTEKEVKKEEP-EPEPKVDEKNTRGRKK 131
Query: 323 SEYAKERKVYESLCRGEMEIPHEITKRLKCWYVTDTHPFLKLAPIKVEQMYVKP 484
KE+K + E+ ++ + +KC D H L L +K + + +P
Sbjct: 132 RGIVKEKKEIKKEEEPVEEVNEKLKELMKCICDEDVHLGL-LKQLKFNEAFGRP 184
>U88181-2|AAB42303.1| 491|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 7 protein.
Length = 491
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +2
Query: 86 TEVDILEYIGFAYYLNGDVKTALEWTQRLLSVDPKHVRARGNIPHYQK 229
++ DIL A+ L+ D +A+E Q+ V+P H A+ + H ++
Sbjct: 323 SDADILCERAEAHILDEDYDSAIEDYQKATEVNPDHREAKEGLEHAKR 370
>U88172-4|AAB42259.1| 224|Caenorhabditis elegans Hypothetical
protein ZK354.7 protein.
Length = 224
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/40 (27%), Positives = 26/40 (65%)
Frame = +2
Query: 239 EQEAELKKQQRGETSDEPEEEDGQDYELSEYAKERKVYES 358
E++ E KK+++ E ++ +E+ ++ + E +E+KV E+
Sbjct: 183 EEKKEEKKEEKKEEKNDENKEEKKEEKKDEKKEEKKVEEA 222
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48
expression abnormal protein protein.
Length = 1291
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 239 EQEAELKKQQRGETSDEPEEEDGQDYELSEYAKERKVY 352
E+E + +Q GE E EE+D + E SE + + Y
Sbjct: 228 EEEGAEEDEQSGEKDPEEEEDDSSNAESSEESTAPRQY 265
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/42 (28%), Positives = 27/42 (64%)
Frame = +2
Query: 236 AEQEAELKKQQRGETSDEPEEEDGQDYELSEYAKERKVYESL 361
+E+ AEL +Q+GET+++ E + L + ++++V ++L
Sbjct: 11901 SEESAELNIKQQGETAEDKYVESRKKTTLKKKPEQKQVTDTL 11942
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/42 (28%), Positives = 27/42 (64%)
Frame = +2
Query: 236 AEQEAELKKQQRGETSDEPEEEDGQDYELSEYAKERKVYESL 361
+E+ AEL +Q+GET+++ E + L + ++++V ++L
Sbjct: 11901 SEESAELNIKQQGETAEDKYVESRKKTTLKKKPEQKQVTDTL 11942
>AL023844-11|CAA19525.3| 489|Caenorhabditis elegans Hypothetical
protein Y48A6B.10 protein.
Length = 489
Score = 27.5 bits (58), Expect = 6.0
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 6/49 (12%)
Frame = +2
Query: 239 EQEAELKKQQRGETSDEPEEEDGQDYELS------EYAKERKVYESLCR 367
+++ +LKK E +E EEE+ ++ E+S AK RK+ E R
Sbjct: 343 KKKKKLKKADESEDHEEAEEEEDKENEISVEEREARRAKNRKIREKKAR 391
>AF500111-1|AAM27196.1| 538|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-2 protein.
Length = 538
Score = 27.5 bits (58), Expect = 6.0
Identities = 25/114 (21%), Positives = 50/114 (43%)
Frame = +2
Query: 143 KTALEWTQRLLSVDPKHVRARGNIPHYQKTIAEQEAELKKQQRGETSDEPEEEDGQDYEL 322
KT L W +R D + V + + + E E+KK++ E + +E++ + +
Sbjct: 77 KTHLHWEER----DDEPVPNKYAVVELATNARQTEKEVKKEEP-EPEPKVDEKNTRGRKK 131
Query: 323 SEYAKERKVYESLCRGEMEIPHEITKRLKCWYVTDTHPFLKLAPIKVEQMYVKP 484
KE+K + E+ ++ + +KC D H L L +K + + +P
Sbjct: 132 RGIVKEKKEIKKEEEPVEEVNEKLKELMKCICDEDVHLGL-LKQLKFNEAFGRP 184
>Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical
protein F17B5.1a protein.
Length = 777
Score = 27.1 bits (57), Expect = 8.0
Identities = 33/129 (25%), Positives = 62/129 (48%), Gaps = 3/129 (2%)
Frame = +2
Query: 32 WMKE-ALRKYKDE-NVMYPFTEVDILEYIGFAYYLNGDVKTALEWTQRLLSVDPKHVRAR 205
W+K +LR E + + + V ++E+ Y L +V+ LE T +L K +
Sbjct: 458 WIKSLSLRSSISEFSSEHSHSTVTVIEHSEKTYELEQNVRIDLEETLKL----EKRIE-E 512
Query: 206 GNIPHYQKTIAEQEAELKKQQRGETSDEPEEEDGQDYELSEYAKERKVYESLCRGEMEIP 385
+I +K +++ ELK+++ E + EEE + E K+++ E+ + E E+
Sbjct: 513 VSIEESKKK--QEKLELKQREEEEARIKEEEEKQRKILEEEARKKQEEEEARLKAEEELK 570
Query: 386 -HEITKRLK 409
+E KR K
Sbjct: 571 IYEEEKRKK 579
>Z79603-5|CAB01891.1| 435|Caenorhabditis elegans Hypothetical
protein M163.5 protein.
Length = 435
Score = 27.1 bits (57), Expect = 8.0
Identities = 10/38 (26%), Positives = 22/38 (57%)
Frame = -2
Query: 260 SLIRPLVRLSSSDSAVCCPALVRASDRRTEVSESIPER 147
+ I+P + + S++ P ++ ++D R + ES PE+
Sbjct: 214 TFIKPPLNIEPLSSSILLPPILNSADNRAQEIESKPEK 251
>Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical protein
F54B3.1b protein.
Length = 3394
Score = 27.1 bits (57), Expect = 8.0
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +2
Query: 149 ALEWTQRLLSVDPKHVRARGNIPHYQKTIAEQEAELKKQQRGETSDEPEEEDGQ--DYEL 322
A E + RLL + VR +++ ++E E + + TSD+ ++ED + D
Sbjct: 1572 ANEISTRLLGMAKSRVRNPYEFERHRRESYKREEEEEDEDPISTSDDDDDEDKEKKDTLF 1631
Query: 323 SEYAKERKVYESLCR 367
+ERKV L R
Sbjct: 1632 DLPPQERKVMTDLVR 1646
>Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical protein
F54B3.1a protein.
Length = 3396
Score = 27.1 bits (57), Expect = 8.0
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +2
Query: 149 ALEWTQRLLSVDPKHVRARGNIPHYQKTIAEQEAELKKQQRGETSDEPEEEDGQ--DYEL 322
A E + RLL + VR +++ ++E E + + TSD+ ++ED + D
Sbjct: 1572 ANEISTRLLGMAKSRVRNPYEFERHRRESYKREEEEEDEDPISTSDDDDDEDKEKKDTLF 1631
Query: 323 SEYAKERKVYESLCR 367
+ERKV L R
Sbjct: 1632 DLPPQERKVMTDLVR 1646
>AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical
protein H11E01.3 protein.
Length = 1464
Score = 27.1 bits (57), Expect = 8.0
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +2
Query: 182 DPKHVRARGNIPHYQKTIAEQEAELKKQQRGETSDEPEEEDGQDYELSEYAK-ERKVYES 358
+P H+ +P+ +T+ EQEA Q TS + G D E E+ + E V ES
Sbjct: 1232 EPSHLVDESEVPNNFETVPEQEAYAPSQDAMMTS---IYQPGSDTETREWDEGEHHVKES 1288
Query: 359 LCRGE 373
E
Sbjct: 1289 TTHSE 1293
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,504,209
Number of Sequences: 27780
Number of extensions: 229389
Number of successful extensions: 1259
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 1056
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1225
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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