Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32493
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    25   0.35 
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    25   0.35 
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    25   0.35 
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    25   0.35 
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    23   2.5  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   5.7  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   5.7  

>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 25.4 bits (53), Expect = 0.35
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 326 EYAKERKVYESLCRGEMEIPHEITKR 403
           EY K+ + YE LC  E ++  E T R
Sbjct: 11  EYRKKDRQYEKLCNEEEKLLEERTSR 36


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 25.4 bits (53), Expect = 0.35
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 326 EYAKERKVYESLCRGEMEIPHEITKR 403
           EY K+ + YE LC  E ++  E T R
Sbjct: 11  EYRKKDRQYEKLCNEEEKLLEERTSR 36


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 25.4 bits (53), Expect = 0.35
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 326 EYAKERKVYESLCRGEMEIPHEITKR 403
           EY K+ + YE LC  E ++  E T R
Sbjct: 11  EYRKKDRQYEKLCNEEEKLLEERTSR 36


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 25.4 bits (53), Expect = 0.35
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 326 EYAKERKVYESLCRGEMEIPHEITKR 403
           EY K+ + YE LC  E ++  E T R
Sbjct: 11  EYRKKDRQYEKLCNEEEKLLEERTSR 36


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 9/33 (27%), Positives = 19/33 (57%)
 Frame = -2

Query: 341 VPLRTLIIRNLDRLLLQAHPRFPHVVASLIRPL 243
           V + T++  +++R L   HP   + ++ L RP+
Sbjct: 127 VSVLTIVAFSMERYLAICHPLRVYTISGLKRPI 159


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -3

Query: 418 VPTFQPLSNLMGYFHFSP 365
           V TF  +++L+GY+ F P
Sbjct: 78  VMTFAGVNDLLGYWVFGP 95


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 15/53 (28%), Positives = 24/53 (45%)
 Frame = +2

Query: 86  TEVDILEYIGFAYYLNGDVKTALEWTQRLLSVDPKHVRARGNIPHYQKTIAEQ 244
           T+ DI +Y  F    N  +K       R++  D KH+  R N  +  KT+  +
Sbjct: 193 TDSDIEKYKMFCNLENVKLKEL-----RIILEDIKHINTRHNTKNGMKTLLSE 240


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,101
Number of Sequences: 438
Number of extensions: 2886
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)