Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32491
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 355 1e-98
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 355 1e-98
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 355 1e-98
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 355 1e-98
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 355 1e-98
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 355 1e-98
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 355 1e-98
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 355 1e-98
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 355 1e-98
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 355 1e-98
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 337 2e-93
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 225 2e-59
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 213 8e-56
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 162 1e-40
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 118 3e-27
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 69 3e-12
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 69 3e-12
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 62 2e-10
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 52 2e-07
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 52 2e-07
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 52 2e-07
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 46 1e-05
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 32 0.28
AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical ... 31 0.37
U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir relat... 31 0.49
U80448-9|AAB37822.2| 577|Caenorhabditis elegans Hypothetical pr... 29 2.0
AY349016-1|AAQ55496.1| 394|Caenorhabditis elegans NHR-41 protein. 27 8.0
AY349015-1|AAQ55495.1| 459|Caenorhabditis elegans NHR-41B protein. 27 8.0
AY349014-1|AAQ55494.1| 583|Caenorhabditis elegans NHR-41A protein. 27 8.0
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 355 bits (873), Expect = 1e-98
Identities = 166/171 (97%), Positives = 171/171 (100%)
Frame = +3
Query: 3 ILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 182
ILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 183 FETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 362
FETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGR
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 363 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAAST 515
DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+
Sbjct: 185 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSS 235
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 355 bits (873), Expect = 1e-98
Identities = 166/171 (97%), Positives = 171/171 (100%)
Frame = +3
Query: 3 ILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 182
ILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 183 FETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 362
FETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGR
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 363 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAAST 515
DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+
Sbjct: 185 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSS 235
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 355 bits (872), Expect = 1e-98
Identities = 165/171 (96%), Positives = 171/171 (100%)
Frame = +3
Query: 3 ILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 182
ILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 183 FETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 362
FETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGR
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 363 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAAST 515
DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+
Sbjct: 185 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSS 235
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 355 bits (872), Expect = 1e-98
Identities = 165/171 (96%), Positives = 171/171 (100%)
Frame = +3
Query: 3 ILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 182
ILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 183 FETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 362
FETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGR
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 363 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAAST 515
DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+
Sbjct: 185 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSS 235
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 355 bits (872), Expect = 1e-98
Identities = 165/171 (96%), Positives = 171/171 (100%)
Frame = +3
Query: 3 ILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 182
ILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 183 FETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 362
FETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGR
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 363 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAAST 515
DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+
Sbjct: 185 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSS 235
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 355 bits (872), Expect = 1e-98
Identities = 165/171 (96%), Positives = 171/171 (100%)
Frame = +3
Query: 3 ILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 182
ILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 183 FETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 362
FETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGR
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 363 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAAST 515
DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+
Sbjct: 185 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSS 235
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 355 bits (872), Expect = 1e-98
Identities = 165/171 (96%), Positives = 171/171 (100%)
Frame = +3
Query: 3 ILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 182
ILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 183 FETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 362
FETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGR
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 363 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAAST 515
DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+
Sbjct: 185 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSS 235
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 355 bits (872), Expect = 1e-98
Identities = 165/171 (96%), Positives = 171/171 (100%)
Frame = +3
Query: 3 ILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 182
ILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM
Sbjct: 21 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 80
Query: 183 FETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 362
FETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGR
Sbjct: 81 FETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 140
Query: 363 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAAST 515
DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+
Sbjct: 141 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSS 191
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 355 bits (872), Expect = 1e-98
Identities = 165/171 (96%), Positives = 171/171 (100%)
Frame = +3
Query: 3 ILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 182
ILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM
Sbjct: 51 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 110
Query: 183 FETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 362
FETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGR
Sbjct: 111 FETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 170
Query: 363 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAAST 515
DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+
Sbjct: 171 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSS 221
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 355 bits (872), Expect = 1e-98
Identities = 165/171 (96%), Positives = 171/171 (100%)
Frame = +3
Query: 3 ILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 182
ILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 183 FETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 362
FETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGR
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 363 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAAST 515
DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+
Sbjct: 185 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSS 235
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 337 bits (829), Expect = 2e-93
Identities = 155/171 (90%), Positives = 166/171 (97%)
Frame = +3
Query: 3 ILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 182
ILTLKYPIEHGI+TNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREKMTQIM
Sbjct: 64 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQIM 123
Query: 183 FETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 362
FETFN+PAMYV IQAVLSLYASGRTTGIVLD+GDGV+HTVPIYEGYALPHAI RLDLAGR
Sbjct: 124 FETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVPIYEGYALPHAIQRLDLAGR 183
Query: 363 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAAST 515
DLTDY+MKILTERGY+FTTTAEREIVRDIKEKLCYVA DFE E+A AA+S+
Sbjct: 184 DLTDYMMKILTERGYTFTTTAEREIVRDIKEKLCYVAHDFESELAAAASSS 234
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 225 bits (549), Expect = 2e-59
Identities = 98/160 (61%), Positives = 129/160 (80%), Gaps = 1/160 (0%)
Frame = +3
Query: 3 ILTLKYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQI 179
+ +++YP+EHGI+ NW DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE+ +I
Sbjct: 67 LFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEI 126
Query: 180 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 359
FETFN PA+Y+ +QAVLSLYA+GRTTG+VLDSGDGV+H VPI +G+A+ HAI R+DLAG
Sbjct: 127 FFETFNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIVKGFAMKHAIQRMDLAG 186
Query: 360 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 479
RD+T+YL +L GY F + E EIVR++KE CY+ALD
Sbjct: 187 RDVTEYLRVLLRREGYEFHRSNEFEIVREMKENACYLALD 226
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 213 bits (519), Expect = 8e-56
Identities = 96/172 (55%), Positives = 129/172 (75%), Gaps = 1/172 (0%)
Frame = +3
Query: 3 ILTLKYPIEHGIITNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQI 179
+L + YP+++GI+ NWDDM +W HTF E L + P+E +LLTE PLNP +NREKM Q+
Sbjct: 67 MLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQV 126
Query: 180 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 359
MFE + ++YVA+QAVL+LYA G TG+V+DSGDGV+H P+YEG+AL H RLD+AG
Sbjct: 127 MFEQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLDIAG 186
Query: 360 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAAST 515
RD+T YL+K+L +RGY+F +A+ E VR +KEKLCY+A D EQE A +T
Sbjct: 187 RDITKYLIKLLLQRGYNFNHSADFETVRQMKEKLCYIAYDVEQEERLALETT 238
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 162 bits (394), Expect = 1e-40
Identities = 75/169 (44%), Positives = 107/169 (63%), Gaps = 8/169 (4%)
Frame = +3
Query: 9 TLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 188
T+KYPI HGI+ +WD ME+ W + LR PE+H LLTE PLN NRE +IMFE
Sbjct: 80 TVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPENREYTAEIMFE 139
Query: 189 TFNSPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILR 344
+FN P +Y+A+QAVL+L AS + TG+V+DSGDGV+H +P+ +GY + I
Sbjct: 140 SFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHCIPVADGYVIGSCIKH 199
Query: 345 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQE 491
+ +AGRD+T ++ +L +R ++ E+ + IKEK CYV D +E
Sbjct: 200 IPIAGRDITYFIQSLLRDREHTIPAEQSYEVAKMIKEKFCYVCPDVMKE 248
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 118 bits (283), Expect = 3e-27
Identities = 52/126 (41%), Positives = 85/126 (67%)
Frame = +3
Query: 24 IEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSP 203
++ G+I +W+ EKI H++ N L P EHPVL +E+ N +A REK+T+IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 204 AMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLM 383
A Y++ VLS +A GRT G+++DSG + VP+++GYA+ HA+++ + G +T+ L
Sbjct: 154 AYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPVFDGYAVTHAVVKCPIGGDLITEQLA 213
Query: 384 KILTER 401
++L ++
Sbjct: 214 QMLDQQ 219
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 68.5 bits (160), Expect = 3e-12
Identities = 41/165 (24%), Positives = 78/165 (47%), Gaps = 4/165 (2%)
Frame = +3
Query: 21 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 200
PIE G + NWD ++IW TF + V + LT+ A + ++I+F+ F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYFGF 120
Query: 201 PAMYVAIQAVLSLYASGRTT----GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 368
++ + L S + +V+DSG + G + +++R+D+ G+ L
Sbjct: 121 TEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKAL 180
Query: 369 TDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA 503
T+ L ++ R + E ++ + KE LC+V+ +F++ M A
Sbjct: 181 TNKLKDWVSYR--QLNVSEETYVINECKEDLCFVSQNFDESMKEA 223
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 68.5 bits (160), Expect = 3e-12
Identities = 41/165 (24%), Positives = 78/165 (47%), Gaps = 4/165 (2%)
Frame = +3
Query: 21 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 200
PIE G + NWD ++IW TF + V + LT+ A + ++I+F+ F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYFGF 120
Query: 201 PAMYVAIQAVLSLYASGRTT----GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 368
++ + L S + +V+DSG + G + +++R+D+ G+ L
Sbjct: 121 TEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKAL 180
Query: 369 TDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA 503
T+ L ++ R + E ++ + KE LC+V+ +F++ M A
Sbjct: 181 TNKLKDWVSYR--QLNVSEETYVINECKEDLCFVSQNFDESMKEA 223
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 62.1 bits (144), Expect = 2e-10
Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 3/137 (2%)
Frame = +3
Query: 90 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 269
EL+V P ++ VLL+ P ++ QI E + + Q L LYA TTG+V
Sbjct: 266 ELKVEPWKYKVLLSIPQNIPTVLIGELLQICLEDIKFQSAGITRQPSLILYAYDVTTGVV 325
Query: 270 LDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG---YSFTTTAEREIV 440
+D G+ V + VP+ +GY + AI + + + D L L+ Y+F + E+ I+
Sbjct: 326 VDIGERV-NIVPVIDGYVVESAICSIPYGSQQMGDSLRASLSAHNKGLYAFQSPVEKLIL 384
Query: 441 RDIKEKLCYVALDFEQE 491
R E+ YV D+++E
Sbjct: 385 RFALEQTTYVPEDYQKE 401
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 52.0 bits (119), Expect = 2e-07
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = +3
Query: 3 ILTLKYPIEHGIITNWDDMEKI 68
ILTLKYPIEHGI+TNWDDMEKI
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKI 86
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 52.0 bits (119), Expect = 2e-07
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = +3
Query: 3 ILTLKYPIEHGIITNWDDMEKI 68
ILTLKYPIEHGI+TNWDDMEKI
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 52.0 bits (119), Expect = 2e-07
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = +3
Query: 3 ILTLKYPIEHGIITNWDDMEKI 68
ILTLKYPIEHGI+TNWDDMEKI
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 46.4 bits (105), Expect = 1e-05
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +3
Query: 3 ILTLKYPIEHGIITNWDDM 59
ILTLKYPIEHGI+TNWDDM
Sbjct: 65 ILTLKYPIEHGIVTNWDDM 83
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 31.9 bits (69), Expect = 0.28
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3
Query: 289 TPSPESSTIPVVRPEAYSESTAWMATYMAGEL 194
TP P SST+PVV P ++ T +Y+A L
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYLANTL 896
>AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical
protein W02F12.4a protein.
Length = 378
Score = 31.5 bits (68), Expect = 0.37
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -2
Query: 434 FPLSGGGERVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGY 300
F L+GG + DL + G++ ++V E G+ Q + F+D Y
Sbjct: 187 FRLAGGKVAHNAIKYDLRVIYGELQRNEVLEEFGIPQDIYFIDSY 231
>U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir related
protein 2.4 protein.
Length = 299
Score = 31.1 bits (67), Expect = 0.49
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Frame = +3
Query: 39 ITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF-ETFNSPAMYV 215
+ + D + K W T + L + + + PL+ K+ K T I + ET + +
Sbjct: 203 LNHLDRIRKAWKQTSHL-LCIGTSLEIIPMGSLPLDAKSKGIKTTTINYQETAHEKIVET 261
Query: 216 AIQA--VLSLYASGRTTGIVLDSGDGVSHTVPI 308
AI A L LY+ G+ +D GD + VPI
Sbjct: 262 AIHADVKLILYSLCNALGVNVDLGDDLPDEVPI 294
>U80448-9|AAB37822.2| 577|Caenorhabditis elegans Hypothetical
protein F59A3.8 protein.
Length = 577
Score = 29.1 bits (62), Expect = 2.0
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +2
Query: 296 HRTHLRRLRSAPRHPPSGLGWSRLDRLPHEDPHREGLLVHHHR*EGNRS*HQGEALLCRP 475
++ +L++ S PR PP G + ++P+ DP G V+ + + + H E+L P
Sbjct: 72 NKPNLKKSPSNPRIPPGGSHPRKKPKVPNRDP--SGKHVNSDKKKPSAEAHDKESLSSPP 129
Query: 476 RLRAG 490
+ AG
Sbjct: 130 QTDAG 134
>AY349016-1|AAQ55496.1| 394|Caenorhabditis elegans NHR-41 protein.
Length = 394
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -2
Query: 398 LGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYG 297
+GED V+G V S T GVG S + D G
Sbjct: 75 IGEDEMTVIGLVPPSASPTSSGVGSSSSISDDSG 108
>AY349015-1|AAQ55495.1| 459|Caenorhabditis elegans NHR-41B protein.
Length = 459
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -2
Query: 398 LGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYG 297
+GED V+G V S T GVG S + D G
Sbjct: 172 IGEDEMTVIGLVPPSASPTSSGVGSSSSISDDSG 205
>AY349014-1|AAQ55494.1| 583|Caenorhabditis elegans NHR-41A protein.
Length = 583
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -2
Query: 398 LGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYG 297
+GED V+G V S T GVG S + D G
Sbjct: 296 IGEDEMTVIGLVPPSASPTSSGVGSSSSISDDSG 329
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.126 0.429
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,045,413
Number of Sequences: 27780
Number of extensions: 192861
Number of successful extensions: 760
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 754
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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