Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32482
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 347 3e-96
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 347 3e-96
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 347 3e-96
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 347 3e-96
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 347 3e-96
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 347 3e-96
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 346 5e-96
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 346 5e-96
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 346 5e-96
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 340 3e-94
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 320 3e-88
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 192 1e-49
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 174 3e-44
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 109 2e-24
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 104 3e-23
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 85 4e-17
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 85 4e-17
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 54 6e-08
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 42 2e-04
AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical ... 31 0.37
U80448-9|AAB37822.2| 577|Caenorhabditis elegans Hypothetical pr... 29 2.0
U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical pr... 29 2.0
AY349016-1|AAQ55496.1| 394|Caenorhabditis elegans NHR-41 protein. 27 8.0
AY349015-1|AAQ55495.1| 459|Caenorhabditis elegans NHR-41B protein. 27 8.0
AY349014-1|AAQ55494.1| 583|Caenorhabditis elegans NHR-41A protein. 27 8.0
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 27 8.0
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 347 bits (853), Expect = 3e-96
Identities = 163/172 (94%), Positives = 170/172 (98%)
Frame = +1
Query: 1 DGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 180
DGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL
Sbjct: 158 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 217
Query: 181 CYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHE 360
CYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHE
Sbjct: 218 CYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHE 277
Query: 361 TVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIK 516
T YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIK
Sbjct: 278 TSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIK 329
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 347 bits (853), Expect = 3e-96
Identities = 163/172 (94%), Positives = 170/172 (98%)
Frame = +1
Query: 1 DGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 180
DGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL
Sbjct: 158 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 217
Query: 181 CYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHE 360
CYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHE
Sbjct: 218 CYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHE 277
Query: 361 TVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIK 516
T YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIK
Sbjct: 278 TSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIK 329
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 347 bits (853), Expect = 3e-96
Identities = 163/172 (94%), Positives = 170/172 (98%)
Frame = +1
Query: 1 DGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 180
DGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL
Sbjct: 158 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 217
Query: 181 CYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHE 360
CYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHE
Sbjct: 218 CYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHE 277
Query: 361 TVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIK 516
T YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIK
Sbjct: 278 TSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIK 329
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 347 bits (853), Expect = 3e-96
Identities = 163/172 (94%), Positives = 170/172 (98%)
Frame = +1
Query: 1 DGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 180
DGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL
Sbjct: 114 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 173
Query: 181 CYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHE 360
CYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHE
Sbjct: 174 CYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHE 233
Query: 361 TVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIK 516
T YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIK
Sbjct: 234 TSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIK 285
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 347 bits (853), Expect = 3e-96
Identities = 163/172 (94%), Positives = 170/172 (98%)
Frame = +1
Query: 1 DGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 180
DGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL
Sbjct: 144 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 203
Query: 181 CYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHE 360
CYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHE
Sbjct: 204 CYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHE 263
Query: 361 TVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIK 516
T YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIK
Sbjct: 264 TSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIK 315
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 347 bits (853), Expect = 3e-96
Identities = 163/172 (94%), Positives = 170/172 (98%)
Frame = +1
Query: 1 DGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 180
DGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL
Sbjct: 158 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 217
Query: 181 CYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHE 360
CYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHE
Sbjct: 218 CYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHE 277
Query: 361 TVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIK 516
T YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIK
Sbjct: 278 TSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIK 329
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 346 bits (851), Expect = 5e-96
Identities = 162/172 (94%), Positives = 170/172 (98%)
Frame = +1
Query: 1 DGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 180
DGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL
Sbjct: 158 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 217
Query: 181 CYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHE 360
CYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGMES GIHE
Sbjct: 218 CYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHE 277
Query: 361 TVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIK 516
T YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIK
Sbjct: 278 TSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIK 329
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 346 bits (851), Expect = 5e-96
Identities = 162/172 (94%), Positives = 170/172 (98%)
Frame = +1
Query: 1 DGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 180
DGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL
Sbjct: 158 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 217
Query: 181 CYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHE 360
CYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGMES GIHE
Sbjct: 218 CYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHE 277
Query: 361 TVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIK 516
T YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIK
Sbjct: 278 TSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIK 329
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 346 bits (851), Expect = 5e-96
Identities = 162/172 (94%), Positives = 170/172 (98%)
Frame = +1
Query: 1 DGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 180
DGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL
Sbjct: 158 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 217
Query: 181 CYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHE 360
CYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGMES GIHE
Sbjct: 218 CYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHE 277
Query: 361 TVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIK 516
T YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIK
Sbjct: 278 TSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIK 329
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 340 bits (836), Expect = 3e-94
Identities = 161/172 (93%), Positives = 169/172 (98%)
Frame = +1
Query: 1 DGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 180
DGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL
Sbjct: 158 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 217
Query: 181 CYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHE 360
CYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGMES GIHE
Sbjct: 218 CYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHE 277
Query: 361 TVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIK 516
T YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAP T+KIK
Sbjct: 278 TSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP-TMKIK 328
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 320 bits (787), Expect = 3e-88
Identities = 149/172 (86%), Positives = 161/172 (93%)
Frame = +1
Query: 1 DGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 180
DGV+HTVPIYEGYALPHAI RLDLAGRDLTDY+MKILTERGY+FTTTAEREIVRDIKEKL
Sbjct: 157 DGVTHTVPIYEGYALPHAIQRLDLAGRDLTDYMMKILTERGYTFTTTAEREIVRDIKEKL 216
Query: 181 CYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHE 360
CYVA DFE E+A AA+S+SLEKSYELPDGQVITIGNERFRCPE LFQP+F+GME GIHE
Sbjct: 217 CYVAHDFESELAAAASSSSLEKSYELPDGQVITIGNERFRCPEVLFQPAFIGMEGAGIHE 276
Query: 361 TVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIK 516
T Y SIMKCDVDIRKDLYANTV+SGGT+M+PGIADRMQKEI LAPST+KIK
Sbjct: 277 TTYQSIMKCDVDIRKDLYANTVLSGGTSMFPGIADRMQKEIQHLAPSTMKIK 328
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 192 bits (468), Expect = 1e-49
Identities = 85/164 (51%), Positives = 114/164 (69%)
Frame = +1
Query: 1 DGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 180
DGV+H P+YEG+AL H RLD+AGRD+T YL+K+L +RGY+F +A+ E VR +KEKL
Sbjct: 161 DGVTHICPVYEGFALHHLTRRLDIAGRDITKYLIKLLLQRGYNFNHSADFETVRQMKEKL 220
Query: 181 CYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHE 360
CY+A D EQE A +T L + Y LPDG+VI +G ERF PE LFQP + +E G+ E
Sbjct: 221 CYIAYDVEQEERLALETTVLSQQYTLPDGRVIRLGGERFEAPEILFQPHLINVEKAGLSE 280
Query: 361 TVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL 492
++ I D+D R D Y + V+SGGTTMYPG+ R++KE+ L
Sbjct: 281 LLFGCIQASDIDTRLDFYKHIVLSGGTTMYPGLPSRLEKELKQL 324
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 174 bits (424), Expect = 3e-44
Identities = 85/172 (49%), Positives = 114/172 (66%)
Frame = +1
Query: 1 DGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 180
DGV+H VPI +G+A+ HAI R+DLAGRD+T+YL +L GY F + E EIVR++KE
Sbjct: 161 DGVTHAVPIVKGFAMKHAIQRMDLAGRDVTEYLRVLLRREGYEFHRSNEFEIVREMKENA 220
Query: 181 CYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHE 360
CY+ALD T + S++ SY LPD I I N FR PE LF+P +G E G+
Sbjct: 221 CYLALD-----PTKVENNSVKSSYALPDTTKIEISNSLFRAPEVLFKPDLIGTEWPGMAH 275
Query: 361 TVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIK 516
V SIMKCDVD+R+ LY+N V+SGGTT++ G DR+ E+ +AP+ KI+
Sbjct: 276 VVNQSIMKCDVDLRQTLYSNIVLSGGTTLFKGFGDRLLGEMRKIAPADGKIR 327
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 109 bits (261), Expect = 2e-24
Identities = 59/180 (32%), Positives = 96/180 (53%), Gaps = 9/180 (5%)
Frame = +1
Query: 1 DGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 180
DGV+H +P+ +GY + I + +AGRD+T ++ +L +R ++ E+ + IKEK
Sbjct: 179 DGVTHCIPVADGYVIGSCIKHIPIAGRDITYFIQSLLRDREHTIPAEQSYEVAKMIKEKF 238
Query: 181 CYVALDFEQEMATAAASTSLEKSYELPDG-QVIT-------IGNERFRCPEALFQPSFLG 336
CYV D +E T K DG IT +G ERF PE F P F
Sbjct: 239 CYVCPDVMKEF--VKYDTDAAKWLRTYDGINSITKKPFNVDVGYERFLGPEIFFHPEFCN 296
Query: 337 ME-SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKI 513
E + I +T+ I +C +D+R+ LY N V+SGG+TM+ A ++Q+++ L+ +++
Sbjct: 297 PEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMFKDFARKLQRDVKRLSDGRLQM 356
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 104 bits (250), Expect = 3e-23
Identities = 53/169 (31%), Positives = 96/169 (56%), Gaps = 6/169 (3%)
Frame = +1
Query: 19 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG---YSFTTTAEREIVRDIKEKLCYV 189
VP+ +GY + AI + + + D L L+ Y+F + E+ I+R E+ YV
Sbjct: 335 VPVIDGYVVESAICSIPYGSQQMGDSLRASLSAHNKGLYAFQSPVEKLILRFALEQTTYV 394
Query: 190 ALDFEQEMATAAAST--SLEKSYELPDGQV-ITIGNERFRCPEALFQPSFLGMESCGIHE 360
D+++E + T SL+ P Q I N RF C E LF+P G+++ G+H+
Sbjct: 395 PEDYQKEEKSENKETRISLDAFTPSPGMQTRFDIDNSRFLCTEGLFKPKKWGLDTKGLHQ 454
Query: 361 TVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTI 507
++ +I++C +D R+ LY N ++GG ++ PGIA+++++E++ + P+TI
Sbjct: 455 LIHEAILQCPIDSRRTLYRNIYLAGGASLMPGIAEKLEQELSTVVPNTI 503
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 84.6 bits (200), Expect = 4e-17
Identities = 51/178 (28%), Positives = 92/178 (51%), Gaps = 22/178 (12%)
Frame = +1
Query: 34 GYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 213
G + +++R+D+ G+ LT+ L ++ R + E ++ + KE LC+V+ +F++ M
Sbjct: 163 GMLIQDSVIRIDVGGKALTNKLKDWVSYR--QLNVSEETYVINECKEDLCFVSQNFDESM 220
Query: 214 ATAA---ASTSLEKSYELPD------GQV-------------ITIGNERFRCPEALFQPS 327
A + K Y +PD G V I +G ERF PE LF PS
Sbjct: 221 KEARNRFQENTTMKRYIMPDFHSTFRGVVKDVKEPHDPQIPSIHLGVERFAIPEILFNPS 280
Query: 328 FLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPS 501
+ ++ CG+ E V SI +C +R L N ++ GG++ +PG +R+++E+ ++ P+
Sbjct: 281 DIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREVRSMLPA 338
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 84.6 bits (200), Expect = 4e-17
Identities = 51/178 (28%), Positives = 92/178 (51%), Gaps = 22/178 (12%)
Frame = +1
Query: 34 GYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 213
G + +++R+D+ G+ LT+ L ++ R + E ++ + KE LC+V+ +F++ M
Sbjct: 163 GMLIQDSVIRIDVGGKALTNKLKDWVSYR--QLNVSEETYVINECKEDLCFVSQNFDESM 220
Query: 214 ATAA---ASTSLEKSYELPD------GQV-------------ITIGNERFRCPEALFQPS 327
A + K Y +PD G V I +G ERF PE LF PS
Sbjct: 221 KEARNRFQGNTTMKRYIMPDFHSTFRGVVKDVKEPHDPQIPSIHLGVERFAIPEILFNPS 280
Query: 328 FLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPS 501
+ ++ CG+ E V SI +C +R L N ++ GG++ +PG +R+++E+ ++ P+
Sbjct: 281 DIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREVRSMLPA 338
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 54.0 bits (124), Expect = 6e-08
Identities = 47/201 (23%), Positives = 88/201 (43%), Gaps = 35/201 (17%)
Frame = +1
Query: 19 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT---AEREIVRD-------I 168
VP+++GYA+ HA+++ + G +T+ L ++L ++ T +E V +
Sbjct: 186 VPVFDGYAVTHAVVKCPIGGDLITEQLAQMLDQQKIDVIPTYRIGGKEEVNEGEAPKWTP 245
Query: 169 KEKLCYVALDFE--------QEMATA---AASTSLEKSY---------ELPDGQVITIGN 288
++ L V ++ ++MA TS++ Y P+G G
Sbjct: 246 RKNLPQVTKSYDAFMKKMLLEDMAATMLQLCDTSIDMDYVDKLPSTPYAFPNGYTKEFGA 305
Query: 289 ERFRCPEALFQPSFLGMES-----CGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYP 453
ER + PE LF +L E + + S D+DIR L++N ++GG ++
Sbjct: 306 ERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLFSNVTVTGGNSLIL 365
Query: 454 GIADRMQKEITALAPSTIKIK 516
G +R+ + P TIK++
Sbjct: 366 GFTERLNYALATKCPPTIKLR 386
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 42.3 bits (95), Expect = 2e-04
Identities = 14/43 (32%), Positives = 29/43 (67%)
Frame = +1
Query: 364 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL 492
++ + KC +D+RK L+ N +++GG + PG+ R+++EI +
Sbjct: 194 LHKLVSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVI 236
>AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical
protein W02F12.4a protein.
Length = 378
Score = 31.5 bits (68), Expect = 0.37
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -1
Query: 153 FPLSGGGERVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGY 19
F L+GG + DL + G++ ++V E G+ Q + F+D Y
Sbjct: 187 FRLAGGKVAHNAIKYDLRVIYGELQRNEVLEEFGIPQDIYFIDSY 231
>U80448-9|AAB37822.2| 577|Caenorhabditis elegans Hypothetical
protein F59A3.8 protein.
Length = 577
Score = 29.1 bits (62), Expect = 2.0
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +3
Query: 15 HRTHLRRLRSAPRHPPSGLGWSRLDRLPHEDPHREGLLVHHHR*EGNRS*HQGEALLCRP 194
++ +L++ S PR PP G + ++P+ DP G V+ + + + H E+L P
Sbjct: 72 NKPNLKKSPSNPRIPPGGSHPRKKPKVPNRDP--SGKHVNSDKKKPSAEAHDKESLSSPP 129
Query: 195 RLRAG 209
+ AG
Sbjct: 130 QTDAG 134
>U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical
protein R07E4.5 protein.
Length = 817
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = +3
Query: 351 HPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPR 494
HP + HH+ H PV HR R H Q A RPR
Sbjct: 769 HPHHQQMPHHQPHLHHAHHPVHPHRGPRASHSQHLQHGQYAHHTQRPR 816
>AY349016-1|AAQ55496.1| 394|Caenorhabditis elegans NHR-41 protein.
Length = 394
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -1
Query: 117 LGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYG 16
+GED V+G V S T GVG S + D G
Sbjct: 75 IGEDEMTVIGLVPPSASPTSSGVGSSSSISDDSG 108
>AY349015-1|AAQ55495.1| 459|Caenorhabditis elegans NHR-41B protein.
Length = 459
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -1
Query: 117 LGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYG 16
+GED V+G V S T GVG S + D G
Sbjct: 172 IGEDEMTVIGLVPPSASPTSSGVGSSSSISDDSG 205
>AY349014-1|AAQ55494.1| 583|Caenorhabditis elegans NHR-41A protein.
Length = 583
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -1
Query: 117 LGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYG 16
+GED V+G V S T GVG S + D G
Sbjct: 296 IGEDEMTVIGLVPPSASPTSSGVGSSSSISDDSG 329
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 27.1 bits (57), Expect = 8.0
Identities = 20/82 (24%), Positives = 25/82 (30%)
Frame = +3
Query: 270 GDHHR*REVPLSRGSLPAFLPGYGIVRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHV 449
G+HH P G +G H HHE P H H +HH
Sbjct: 407 GEHHGTHHSPAHHGEHGTHHGHHG-EHHHAPAHHGHHESHGHGHHSPAH-HGHHGEHHHA 464
Query: 450 PRYRRQDAEGDHRPRALDHQDQ 515
P + E H P H +
Sbjct: 465 PAHHGHHGEHHHAPAHHGHHGE 486
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,560,550
Number of Sequences: 27780
Number of extensions: 211699
Number of successful extensions: 689
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 684
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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