Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32473
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 344 2e-95
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 344 2e-95
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 344 2e-95
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 344 2e-95
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 344 2e-95
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 344 2e-95
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 343 3e-95
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 343 3e-95
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 343 3e-95
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 337 2e-93
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 320 4e-88
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 181 3e-46
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 167 3e-42
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 104 4e-23
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 100 1e-21
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 79 2e-15
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 78 3e-15
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 78 3e-15
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 46 2e-05
U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical pr... 29 2.0
AF100306-10|AAC68926.1| 798|Caenorhabditis elegans Hypothetical... 29 2.6
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 27 6.0
Z75545-1|CAB61025.1| 665|Caenorhabditis elegans Hypothetical pr... 27 8.0
AB000913-1|BAA21715.1| 665|Caenorhabditis elegans UNC-14 protein. 27 8.0
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 344 bits (846), Expect = 2e-95
Identities = 163/171 (95%), Positives = 169/171 (98%)
Frame = +2
Query: 2 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEK 181
DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEK
Sbjct: 180 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEK 239
Query: 182 SYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTV 361
SYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV
Sbjct: 240 SYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTV 299
Query: 362 MSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASL 514
+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASL
Sbjct: 300 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL 350
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 344 bits (846), Expect = 2e-95
Identities = 163/171 (95%), Positives = 169/171 (98%)
Frame = +2
Query: 2 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEK 181
DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEK
Sbjct: 180 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEK 239
Query: 182 SYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTV 361
SYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV
Sbjct: 240 SYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTV 299
Query: 362 MSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASL 514
+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASL
Sbjct: 300 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL 350
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 344 bits (846), Expect = 2e-95
Identities = 163/171 (95%), Positives = 169/171 (98%)
Frame = +2
Query: 2 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEK 181
DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEK
Sbjct: 180 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEK 239
Query: 182 SYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTV 361
SYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV
Sbjct: 240 SYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTV 299
Query: 362 MSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASL 514
+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASL
Sbjct: 300 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL 350
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 344 bits (846), Expect = 2e-95
Identities = 163/171 (95%), Positives = 169/171 (98%)
Frame = +2
Query: 2 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEK 181
DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEK
Sbjct: 136 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEK 195
Query: 182 SYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTV 361
SYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV
Sbjct: 196 SYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTV 255
Query: 362 MSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASL 514
+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASL
Sbjct: 256 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL 306
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 344 bits (846), Expect = 2e-95
Identities = 163/171 (95%), Positives = 169/171 (98%)
Frame = +2
Query: 2 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEK 181
DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEK
Sbjct: 166 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEK 225
Query: 182 SYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTV 361
SYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV
Sbjct: 226 SYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTV 285
Query: 362 MSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASL 514
+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASL
Sbjct: 286 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL 336
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 344 bits (846), Expect = 2e-95
Identities = 163/171 (95%), Positives = 169/171 (98%)
Frame = +2
Query: 2 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEK 181
DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEK
Sbjct: 180 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEK 239
Query: 182 SYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTV 361
SYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV
Sbjct: 240 SYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTV 299
Query: 362 MSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASL 514
+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASL
Sbjct: 300 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL 350
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 343 bits (844), Expect = 3e-95
Identities = 162/171 (94%), Positives = 169/171 (98%)
Frame = +2
Query: 2 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEK 181
DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEK
Sbjct: 180 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEK 239
Query: 182 SYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTV 361
SYELPDGQVIT+GNERFRCPEA+FQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV
Sbjct: 240 SYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTV 299
Query: 362 MSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASL 514
+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASL
Sbjct: 300 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL 350
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 343 bits (844), Expect = 3e-95
Identities = 162/171 (94%), Positives = 169/171 (98%)
Frame = +2
Query: 2 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEK 181
DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEK
Sbjct: 180 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEK 239
Query: 182 SYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTV 361
SYELPDGQVIT+GNERFRCPEA+FQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV
Sbjct: 240 SYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTV 299
Query: 362 MSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASL 514
+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASL
Sbjct: 300 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL 350
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 343 bits (844), Expect = 3e-95
Identities = 162/171 (94%), Positives = 169/171 (98%)
Frame = +2
Query: 2 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEK 181
DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEK
Sbjct: 180 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEK 239
Query: 182 SYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTV 361
SYELPDGQVIT+GNERFRCPEA+FQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV
Sbjct: 240 SYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTV 299
Query: 362 MSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASL 514
+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASL
Sbjct: 300 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL 350
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 337 bits (829), Expect = 2e-93
Identities = 161/171 (94%), Positives = 168/171 (98%)
Frame = +2
Query: 2 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEK 181
DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEK
Sbjct: 180 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEK 239
Query: 182 SYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTV 361
SYELPDGQVIT+GNERFRCPEA+FQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV
Sbjct: 240 SYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTV 299
Query: 362 MSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASL 514
+SGGTTMYPGIADRMQKEITALAP T+KIKIIAPPERKYSVWIGGSILASL
Sbjct: 300 LSGGTTMYPGIADRMQKEITALAP-TMKIKIIAPPERKYSVWIGGSILASL 349
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 320 bits (786), Expect = 4e-88
Identities = 150/171 (87%), Positives = 161/171 (94%)
Frame = +2
Query: 2 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEK 181
DLAGRDLTDY+MKILTERGY+FTTTAEREIVRDIKEKLCYVA DFE E+A AA+S+SLEK
Sbjct: 179 DLAGRDLTDYMMKILTERGYTFTTTAEREIVRDIKEKLCYVAHDFESELAAAASSSSLEK 238
Query: 182 SYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTV 361
SYELPDGQVITIGNERFRCPE LFQP+F+GME GIHET Y SIMKCDVDIRKDLYANTV
Sbjct: 239 SYELPDGQVITIGNERFRCPEVLFQPAFIGMEGAGIHETTYQSIMKCDVDIRKDLYANTV 298
Query: 362 MSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASL 514
+SGGT+M+PGIADRMQKEI LAPST+KIKIIAPPERKYSVWIGGSILASL
Sbjct: 299 LSGGTSMFPGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASL 349
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 181 bits (440), Expect = 3e-46
Identities = 87/182 (47%), Positives = 120/182 (65%), Gaps = 11/182 (6%)
Frame = +2
Query: 2 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEK 181
D+AGRD+T YL+K+L +RGY+F +A+ E VR +KEKLCY+A D EQE A +T L +
Sbjct: 183 DIAGRDITKYLIKLLLQRGYNFNHSADFETVRQMKEKLCYIAYDVEQEERLALETTVLSQ 242
Query: 182 SYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTV 361
Y LPDG+VI +G ERF PE LFQP + +E G+ E ++ I D+D R D Y + V
Sbjct: 243 QYTLPDGRVIRLGGERFEAPEILFQPHLINVEKAGLSELLFGCIQASDIDTRLDFYKHIV 302
Query: 362 MSGGTTMYPGIADRMQKEITAL-----------APSTIKIKIIAPPERKYSVWIGGSILA 508
+SGGTTMYPG+ R++KE+ L A KI+I APP RK+ V++GG++LA
Sbjct: 303 LSGGTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLA 362
Query: 509 SL 514
+L
Sbjct: 363 NL 364
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 167 bits (407), Expect = 3e-42
Identities = 85/171 (49%), Positives = 110/171 (64%)
Frame = +2
Query: 2 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEK 181
DLAGRD+T+YL +L GY F + E EIVR++KE CY+ALD T + S++
Sbjct: 183 DLAGRDVTEYLRVLLRREGYEFHRSNEFEIVREMKENACYLALD-----PTKVENNSVKS 237
Query: 182 SYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTV 361
SY LPD I I N FR PE LF+P +G E G+ V SIMKCDVD+R+ LY+N V
Sbjct: 238 SYALPDTTKIEISNSLFRAPEVLFKPDLIGTEWPGMAHVVNQSIMKCDVDLRQTLYSNIV 297
Query: 362 MSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASL 514
+SGGTT++ G DR+ E+ +AP+ KI+I A ER WIGGSI+ASL
Sbjct: 298 LSGGTTLFKGFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASL 348
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 104 bits (249), Expect = 4e-23
Identities = 50/154 (32%), Positives = 92/154 (59%), Gaps = 3/154 (1%)
Frame = +2
Query: 59 YSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAAST--SLEKSYELPDGQV-ITIGNER 229
Y+F + E+ I+R E+ YV D+++E + T SL+ P Q I N R
Sbjct: 373 YAFQSPVEKLILRFALEQTTYVPEDYQKEEKSENKETRISLDAFTPSPGMQTRFDIDNSR 432
Query: 230 FRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQ 409
F C E LF+P G+++ G+H+ ++ +I++C +D R+ LY N ++GG ++ PGIA++++
Sbjct: 433 FLCTEGLFKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGIAEKLE 492
Query: 410 KEITALAPSTIKIKIIAPPERKYSVWIGGSILAS 511
+E++ + P+TI ++ P R + ++G I+AS
Sbjct: 493 QELSTVVPNTIHTQVNISPWRYNAAYLGAQIVAS 526
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 99.5 bits (237), Expect = 1e-21
Identities = 63/194 (32%), Positives = 99/194 (51%), Gaps = 25/194 (12%)
Frame = +2
Query: 5 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKS 184
+AGRD+T ++ +L +R ++ E+ + IKEK CYV D +E T K
Sbjct: 202 IAGRDITYFIQSLLRDREHTIPAEQSYEVAKMIKEKFCYVCPDVMKEFVKY--DTDAAKW 259
Query: 185 YELPDG-QVIT-------IGNERFRCPEALFQPSFLGME-SCGIHETVYNSIMKCDVDIR 337
DG IT +G ERF PE F P F E + I +T+ I +C +D+R
Sbjct: 260 LRTYDGINSITKKPFNVDVGYERFLGPEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVR 319
Query: 338 KDLYANTVMSGGTTMYPGIADRMQKEITALA----------------PSTIKIKIIAPPE 469
+ LY N V+SGG+TM+ A ++Q+++ L+ P I +++I+
Sbjct: 320 RGLYENIVLSGGSTMFKDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKM 379
Query: 470 RKYSVWIGGSILAS 511
++Y+VW GGS+LAS
Sbjct: 380 QRYAVWFGGSMLAS 393
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 78.6 bits (185), Expect = 2e-15
Identities = 42/118 (35%), Positives = 60/118 (50%), Gaps = 8/118 (6%)
Frame = +2
Query: 185 YELPDGQVITIGNERFRCPEALFQPSFLGMES-----CGIHETVYNSIMKCDVDIRKDLY 349
Y P+G G ER + PE LF +L E + + S D+DIR L+
Sbjct: 293 YAFPNGYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLF 352
Query: 350 ANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPP---ERKYSVWIGGSILASL 514
+N ++GG ++ G +R+ + P TIK+++ A P ERKY WIGGSIL SL
Sbjct: 353 SNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSL 410
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 78.2 bits (184), Expect = 3e-15
Identities = 49/173 (28%), Positives = 87/173 (50%), Gaps = 22/173 (12%)
Frame = +2
Query: 2 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA---ASTS 172
D+ G+ LT+ L ++ R + E ++ + KE LC+V+ +F++ M A +
Sbjct: 174 DVGGKALTNKLKDWVSYR--QLNVSEETYVINECKEDLCFVSQNFDESMKEARNRFQENT 231
Query: 173 LEKSYELPD------GQV-------------ITIGNERFRCPEALFQPSFLGMESCGIHE 295
K Y +PD G V I +G ERF PE LF PS + ++ CG+ E
Sbjct: 232 TMKRYIMPDFHSTFRGVVKDVKEPHDPQIPSIHLGVERFAIPEILFNPSDIDIDQCGVAE 291
Query: 296 TVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 454
V SI +C +R L N ++ GG++ +PG +R+++E+ ++ P+ + +
Sbjct: 292 AVIESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREVRSMLPAEYGLNV 344
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 78.2 bits (184), Expect = 3e-15
Identities = 49/173 (28%), Positives = 87/173 (50%), Gaps = 22/173 (12%)
Frame = +2
Query: 2 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA---ASTS 172
D+ G+ LT+ L ++ R + E ++ + KE LC+V+ +F++ M A +
Sbjct: 174 DVGGKALTNKLKDWVSYR--QLNVSEETYVINECKEDLCFVSQNFDESMKEARNRFQGNT 231
Query: 173 LEKSYELPD------GQV-------------ITIGNERFRCPEALFQPSFLGMESCGIHE 295
K Y +PD G V I +G ERF PE LF PS + ++ CG+ E
Sbjct: 232 TMKRYIMPDFHSTFRGVVKDVKEPHDPQIPSIHLGVERFAIPEILFNPSDIDIDQCGVAE 291
Query: 296 TVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 454
V SI +C +R L N ++ GG++ +PG +R+++E+ ++ P+ + +
Sbjct: 292 AVIESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREVRSMLPAEYGLNV 344
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 45.6 bits (103), Expect = 2e-05
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 9/81 (11%)
Frame = +2
Query: 299 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL-APSTIKIKIIAP---- 463
++ + KC +D+RK L+ N +++GG + PG+ R+++EI + + KI +I
Sbjct: 194 LHKLVSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQF 253
Query: 464 PERK----YSVWIGGSILASL 514
E K + W+G S+L SL
Sbjct: 254 SEIKNTPLFVSWLGASLLGSL 274
>U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical
protein R07E4.5 protein.
Length = 817
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = +1
Query: 286 HPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPR 429
HP + HH+ H PV HR R H Q A RPR
Sbjct: 769 HPHHQQMPHHQPHLHHAHHPVHPHRGPRASHSQHLQHGQYAHHTQRPR 816
>AF100306-10|AAC68926.1| 798|Caenorhabditis elegans Hypothetical
protein T24C4.7 protein.
Length = 798
Score = 28.7 bits (61), Expect = 2.6
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1
Query: 385 PRYRRQDAEGDHRPRALDHQDQDHRSPREEVLR 483
P+YRRQ L Q Q HR PRE +L+
Sbjct: 181 PKYRRQVMHCSKSEHKLVLQTQKHRLPRERMLK 213
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/66 (25%), Positives = 21/66 (31%)
Frame = +1
Query: 310 HHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRSPREEVLRMD 489
HH H G H H HH P + E H P H + H +P +
Sbjct: 432 HHHAPAHH--GHHESHGHG---HHSPAHHGHHGEHHHAPAHHGHHGEHHHAPAHHGHHGE 486
Query: 490 RWIHPG 507
H G
Sbjct: 487 HGTHHG 492
>Z75545-1|CAB61025.1| 665|Caenorhabditis elegans Hypothetical
protein K10D3.2 protein.
Length = 665
Score = 27.1 bits (57), Expect = 8.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 427 RALDHQDQDHRSPREEVLRMDRW 495
R +D D + R EE++R DRW
Sbjct: 134 RFVDVNDNEIREANEEIIRKDRW 156
>AB000913-1|BAA21715.1| 665|Caenorhabditis elegans UNC-14 protein.
Length = 665
Score = 27.1 bits (57), Expect = 8.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 427 RALDHQDQDHRSPREEVLRMDRW 495
R +D D + R EE++R DRW
Sbjct: 134 RFVDVNDNEIREANEEIIRKDRW 156
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,204,360
Number of Sequences: 27780
Number of extensions: 199373
Number of successful extensions: 710
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 702
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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