Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32462
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68316-4|CAA92683.1| 234|Caenorhabditis elegans Hypothetical pr... 74 5e-14
AF039713-7|AAB96722.1| 203|Caenorhabditis elegans Hypothetical ... 71 7e-13
AF014940-5|AAB63937.1| 203|Caenorhabditis elegans Suppressor/en... 50 1e-06
U64843-16|AAX55689.1| 442|Caenorhabditis elegans Modulation of ... 29 2.0
U64843-15|AAF98227.2| 489|Caenorhabditis elegans Modulation of ... 29 2.0
U64843-14|AAM45353.1| 475|Caenorhabditis elegans Modulation of ... 29 2.0
AF303088-1|AAG36975.1| 489|Caenorhabditis elegans serotonin-gat... 29 2.0
AF016686-15|AAB66231.3| 572|Caenorhabditis elegans C-type lecti... 29 2.0
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 28 4.6
AC024839-3|AAF60829.1| 308|Caenorhabditis elegans T box family ... 28 4.6
AC024839-2|AAF60830.1| 308|Caenorhabditis elegans Hypothetical ... 28 4.6
>Z68316-4|CAA92683.1| 234|Caenorhabditis elegans Hypothetical
protein K08E4.6 protein.
Length = 234
Score = 74.1 bits (174), Expect = 5e-14
Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 6/174 (3%)
Frame = +3
Query: 12 IYLTTIFSVVFAFEKDITFTVQAGMTDCFYQRAQ--PNELIDIEYQVIDATHGELDISFQ 185
I L T F + E D T V AG CF+Q ++ ++++YQVID G+L+I+F
Sbjct: 11 ILLITPF--ILCGEYDFTVEVPAGKFQCFFQPVDLAKHKTLEVDYQVIDG--GDLNINFM 66
Query: 186 LTDPVGRVIVSDYKKPENSHRHQATLNGDYRFCFDNTFSTFSQKTVFFDILI----XXXX 353
+ ++ D K + SHR + GDY+ CFDN+FS S+K VFF+I +
Sbjct: 67 ILHGAN-ILKQDQLKVDGSHRIELNQPGDYQVCFDNSFSYQSRKVVFFEIFLFDAHGNLD 125
Query: 354 XXXXXXXXXXXXXLGTAAESYIMRVRDIAESVNRVRDNVSAAKRLQELQSAHEA 515
L + + + N +++N++ + Q L AHEA
Sbjct: 126 EADLSAMARTDSDLSAKMNELGVTIDEFHRRANGIKNNLNKVEYHQALLRAHEA 179
>AF039713-7|AAB96722.1| 203|Caenorhabditis elegans Hypothetical
protein F57B10.5 protein.
Length = 203
Score = 70.5 bits (165), Expect = 7e-13
Identities = 35/110 (31%), Positives = 59/110 (53%)
Frame = +3
Query: 3 MRYIYLTTIFSVVFAFEKDITFTVQAGMTDCFYQRAQPNELIDIEYQVIDATHGELDISF 182
++++ +++I V ++TF + CFY+ + + E+QV+ T G D+
Sbjct: 2 LKFVIVSSIL-VALGLSIELTFELPDNANQCFYEDLKKDVDTVFEFQVV--TGGHYDVDL 58
Query: 183 QLTDPVGRVIVSDYKKPENSHRHQATLNGDYRFCFDNTFSTFSQKTVFFD 332
+ DP G+V+ D KK +S +A + G Y+ CF N FSTFS K V+ D
Sbjct: 59 IIEDPNGKVLYKDTKKQYDSINFKAEVEGTYKACFSNEFSTFSHKIVYMD 108
>AF014940-5|AAB63937.1| 203|Caenorhabditis elegans
Suppressor/enhancer of lin-12 protein9 protein.
Length = 203
Score = 50.0 bits (114), Expect = 1e-06
Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
Frame = +3
Query: 18 LTTIFSVVFAFEKDITFT-VQAGMTDCFYQRAQPNELIDIEYQVIDATHGELDISFQLTD 194
LT I +V+F F V A CF+ R + + ++V + G LDI ++T
Sbjct: 4 LTWILAVLFVTPAASYFIHVDANEEQCFFDRLTSGTKMGLMFEVAEG--GFLDIDVKITG 61
Query: 195 PVGRVIVSDYKKPENSHRHQATLNGDYRFCFDNTFSTFSQKTVFFDILI 341
P + I ++ A ++G Y +CF N ST + K V F + I
Sbjct: 62 PDNKEIYKGERESSGKFTFAAHMDGVYTYCFGNKMSTMTPKAVMFTVEI 110
>U64843-16|AAX55689.1| 442|Caenorhabditis elegans Modulation of
locomotion defectiveprotein 1, isoform c protein.
Length = 442
Score = 29.1 bits (62), Expect = 2.0
Identities = 21/67 (31%), Positives = 28/67 (41%)
Frame = -1
Query: 501 TATLGVSWPRTRCPSPGSRTPLYPSPSLCSSRLQYQVPFLCRHHNLSPLSPHCLLICRKI 322
T L W C RT ++ SPS + Y+ + +H LS SP C L R+
Sbjct: 108 TRLLPKIWSPNTCMINSKRTTVHASPSENVMVILYENGTVWINHRLSVKSP-CNLDLRQF 166
Query: 321 QFSD*TC 301
F TC
Sbjct: 167 PFDTQTC 173
>U64843-15|AAF98227.2| 489|Caenorhabditis elegans Modulation of
locomotion defectiveprotein 1, isoform a protein.
Length = 489
Score = 29.1 bits (62), Expect = 2.0
Identities = 21/67 (31%), Positives = 28/67 (41%)
Frame = -1
Query: 501 TATLGVSWPRTRCPSPGSRTPLYPSPSLCSSRLQYQVPFLCRHHNLSPLSPHCLLICRKI 322
T L W C RT ++ SPS + Y+ + +H LS SP C L R+
Sbjct: 108 TRLLPKIWSPNTCMINSKRTTVHASPSENVMVILYENGTVWINHRLSVKSP-CNLDLRQF 166
Query: 321 QFSD*TC 301
F TC
Sbjct: 167 PFDTQTC 173
>U64843-14|AAM45353.1| 475|Caenorhabditis elegans Modulation of
locomotion defectiveprotein 1, isoform b protein.
Length = 475
Score = 29.1 bits (62), Expect = 2.0
Identities = 21/67 (31%), Positives = 28/67 (41%)
Frame = -1
Query: 501 TATLGVSWPRTRCPSPGSRTPLYPSPSLCSSRLQYQVPFLCRHHNLSPLSPHCLLICRKI 322
T L W C RT ++ SPS + Y+ + +H LS SP C L R+
Sbjct: 108 TRLLPKIWSPNTCMINSKRTTVHASPSENVMVILYENGTVWINHRLSVKSP-CNLDLRQF 166
Query: 321 QFSD*TC 301
F TC
Sbjct: 167 PFDTQTC 173
>AF303088-1|AAG36975.1| 489|Caenorhabditis elegans serotonin-gated
chloride channel protein.
Length = 489
Score = 29.1 bits (62), Expect = 2.0
Identities = 21/67 (31%), Positives = 28/67 (41%)
Frame = -1
Query: 501 TATLGVSWPRTRCPSPGSRTPLYPSPSLCSSRLQYQVPFLCRHHNLSPLSPHCLLICRKI 322
T L W C RT ++ SPS + Y+ + +H LS SP C L R+
Sbjct: 108 TRLLPKIWSPNTCMINSKRTTVHASPSENVMVILYENGTVWINHRLSVKSP-CNLDLRQF 166
Query: 321 QFSD*TC 301
F TC
Sbjct: 167 PFDTQTC 173
>AF016686-15|AAB66231.3| 572|Caenorhabditis elegans C-type lectin
protein 43 protein.
Length = 572
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = -1
Query: 468 RCPSPGSRTPLYPSPSLCSSRLQYQVPFLCRH-HNLSPLSPHCLLICRKIQF 316
+C S + P S+ ++PF+C+H NL +P L C QF
Sbjct: 416 KCSSLAMSGSVIPKGQWLSTNCNNKIPFICKHPQNLPTPTPTALGQCNGTQF 467
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 27.9 bits (59), Expect = 4.6
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -1
Query: 483 SWPRTRCPSPGSRTPLYPSPSLCSSRLQYQVP 388
S+P PSP +P YPSPS + Y VP
Sbjct: 371 SYPSPSYPSPSYPSPSYPSPSY-PAEPAYSVP 401
Score = 27.1 bits (57), Expect = 8.0
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -1
Query: 483 SWPRTRCPSPGSRTPLYPSPS 421
S+P PSP +P YPSPS
Sbjct: 366 SYPSPSYPSPSYPSPSYPSPS 386
>AC024839-3|AAF60829.1| 308|Caenorhabditis elegans T box family
protein 30 protein.
Length = 308
Score = 27.9 bits (59), Expect = 4.6
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3
Query: 270 DYRFCFDNTFSTFSQKTVFFD 332
DY + F+ TF +FS + V+FD
Sbjct: 282 DYSYYFNPTFQSFSPENVYFD 302
>AC024839-2|AAF60830.1| 308|Caenorhabditis elegans Hypothetical
protein Y59E9AR.5 protein.
Length = 308
Score = 27.9 bits (59), Expect = 4.6
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3
Query: 270 DYRFCFDNTFSTFSQKTVFFD 332
DY + F+ TF +FS + V+FD
Sbjct: 282 DYSYYFNPTFQSFSPENVYFD 302
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,048,976
Number of Sequences: 27780
Number of extensions: 223061
Number of successful extensions: 661
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 658
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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