Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32456
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY525079-1|AAS13528.1|  359|Caenorhabditis elegans serine or cys...    37   0.010
AF026209-15|AAB71270.1|  359|Caenorhabditis elegans Serpin prote...    37   0.010
AY525080-1|AAS13529.1|  362|Caenorhabditis elegans serine or cys...    36   0.017
AC087794-5|AAM48555.1|  362|Caenorhabditis elegans Serpin protei...    36   0.017
U50301-8|AAB37049.1|  339|Caenorhabditis elegans Serpin protein ...    32   0.28 
Z75543-10|CAA99875.2|  279|Caenorhabditis elegans Hypothetical p...    31   0.49 
AY728059-1|AAU43720.1|  279|Caenorhabditis elegans cadmium-induc...    31   0.49 
Z74030-11|CAA98446.1|  481|Caenorhabditis elegans Hypothetical p...    27   8.0  

>AY525079-1|AAS13528.1|  359|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 359

 Score = 36.7 bits (81), Expect = 0.010
 Identities = 21/68 (30%), Positives = 40/68 (58%)
 Frame = -2

Query: 512 LQKDVDDFGLEDVDVKLPRFQISTNVVLNKPLNDMGVYDIFQPDLANFQRITKENIFVSA 333
           +Q  ++D     V V++P+F+I   + L + L  +G+ +IF  + A+   I  + +F+S+
Sbjct: 242 IQNLLNDLKSSYVSVQIPKFKIEKELDLKETLEAIGIKEIF-AEGADLSGIA-DKVFISS 299

Query: 332 IVHKADIE 309
            +HKA IE
Sbjct: 300 GIHKAIIE 307


>AF026209-15|AAB71270.1|  359|Caenorhabditis elegans Serpin protein
           2 protein.
          Length = 359

 Score = 36.7 bits (81), Expect = 0.010
 Identities = 21/68 (30%), Positives = 40/68 (58%)
 Frame = -2

Query: 512 LQKDVDDFGLEDVDVKLPRFQISTNVVLNKPLNDMGVYDIFQPDLANFQRITKENIFVSA 333
           +Q  ++D     V V++P+F+I   + L + L  +G+ +IF  + A+   I  + +F+S+
Sbjct: 242 IQNLLNDLKSSYVSVQIPKFKIEKELDLKETLEAIGIKEIF-AEGADLSGIA-DKVFISS 299

Query: 332 IVHKADIE 309
            +HKA IE
Sbjct: 300 GIHKAIIE 307


>AY525080-1|AAS13529.1|  362|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 362

 Score = 35.9 bits (79), Expect = 0.017
 Identities = 21/56 (37%), Positives = 33/56 (58%)
 Frame = -2

Query: 476 VDVKLPRFQISTNVVLNKPLNDMGVYDIFQPDLANFQRITKENIFVSAIVHKADIE 309
           ++ +LP+F I  ++ L   L  +G+ DIF  D A+   +  EN+ +S  VHKA IE
Sbjct: 256 MNTQLPKFTIEKDLNLKSHLQTLGITDIFS-DSADLSGLA-ENLKISEGVHKAIIE 309


>AC087794-5|AAM48555.1|  362|Caenorhabditis elegans Serpin protein 3
           protein.
          Length = 362

 Score = 35.9 bits (79), Expect = 0.017
 Identities = 21/56 (37%), Positives = 33/56 (58%)
 Frame = -2

Query: 476 VDVKLPRFQISTNVVLNKPLNDMGVYDIFQPDLANFQRITKENIFVSAIVHKADIE 309
           ++ +LP+F I  ++ L   L  +G+ DIF  D A+   +  EN+ +S  VHKA IE
Sbjct: 256 MNTQLPKFTIEKDLNLKSHLQTLGITDIFS-DSADLSGLA-ENLKISEGVHKAIIE 309


>U50301-8|AAB37049.1|  339|Caenorhabditis elegans Serpin protein 8
           protein.
          Length = 339

 Score = 31.9 bits (69), Expect = 0.28
 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
 Frame = -2

Query: 476 VDVKLPRFQISTNVVLNKPLNDMGVYDIFQPD--LANFQRITKENIFVSAIVHKADIE 309
           V+V++P ++  T + LN  L  +G+  I      + NF     EN+ +S  +HKA IE
Sbjct: 260 VNVQIPIWRNETEIDLNSTLQAIGITKILNESAYIGNFA----ENVHISEFIHKAIIE 313


>Z75543-10|CAA99875.2|  279|Caenorhabditis elegans Hypothetical
           protein K01D12.14 protein.
          Length = 279

 Score = 31.1 bits (67), Expect = 0.49
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = +1

Query: 316 SALCTMADTNIFSFVIRWKLAKSGW 390
           +ALC +AD ++ S +I++K A+  W
Sbjct: 133 TALCRLADNHLLSIIIKYKAAEDAW 157


>AY728059-1|AAU43720.1|  279|Caenorhabditis elegans
           cadmium-inducible lysosomal proteinCDR-5 protein.
          Length = 279

 Score = 31.1 bits (67), Expect = 0.49
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = +1

Query: 316 SALCTMADTNIFSFVIRWKLAKSGW 390
           +ALC +AD ++ S +I++K A+  W
Sbjct: 133 TALCRLADNHLLSIIIKYKAAEDAW 157


>Z74030-11|CAA98446.1|  481|Caenorhabditis elegans Hypothetical
           protein D1054.13 protein.
          Length = 481

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +1

Query: 241 GAEILSVRVATVDAEATVPDSVTSISALCTMAD 339
           G EIL V   T       PD+V +ISA+C   D
Sbjct: 207 GEEILCVMTTTSCFAPRSPDNVEAISAICAAHD 239


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,276,128
Number of Sequences: 27780
Number of extensions: 182987
Number of successful extensions: 374
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 372
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)