Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32455
(516 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_1144 - 10725663-10726013 33 0.18
02_05_1071 - 33876061-33877308,33877593-33877898 32 0.24
05_01_0184 - 1298640-1298751,1298936-1299027,1299695-1299910,130... 31 0.42
05_01_0182 + 1284900-1285469,1285604-1286612,1286698-1287107 31 0.42
10_01_0176 - 1978073-1978324,1978425-1978604 31 0.55
07_01_0808 - 6326767-6327788,6328270-6328459 29 2.2
06_03_0251 + 18715023-18715106,18715274-18715396,18715509-187156... 29 2.9
01_05_0095 + 18069688-18070416 29 2.9
12_01_0809 + 7422137-7422251,7425578-7426353 28 3.9
05_01_0384 + 2997465-2999777,2999960-3000035,3003027-3003102,300... 28 3.9
09_02_0067 - 3812508-3813158,3813944-3814030,3814124-3814312,381... 28 5.1
06_01_0378 - 2717010-2717565,2718165-2718229,2718365-2719117 28 5.1
05_03_0458 + 14280953-14281866,14281964-14282912 28 5.1
01_05_0071 + 17842918-17843222,17843391-17843646,17844257-178445... 28 5.1
06_03_0429 - 20701107-20701534,20701628-20701847 27 6.8
01_01_0066 - 513578-513730,513809-513920,514000-514163,514369-51... 27 6.8
10_08_0973 - 21963754-21963936,21964089-21964383,21964504-219646... 27 8.9
09_06_0125 - 21011757-21012428 27 8.9
09_04_0237 - 15936630-15937250,15937457-15937534,15938874-159389... 27 8.9
05_05_0274 - 23755384-23755655,23755780-23756139,23756316-237564... 27 8.9
04_04_0445 + 25280642-25281796 27 8.9
03_05_0813 - 27894593-27894915,27896164-27896422,27896513-278967... 27 8.9
>07_01_1144 - 10725663-10726013
Length = 116
Score = 32.7 bits (71), Expect = 0.18
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = -3
Query: 439 GADGP--DDALVVLIDSPAAGEPVGGVLGGAQEVYPAGARPSAVAHNAYLGATLILPKGV 266
GADGP DDAL + +P G P+G + + PA A PS+ A T +L V
Sbjct: 48 GADGPIADDALEDMEAAPL-GSPIGTTMTEPEPELPANAPPSSAGATASSTPTTLLAAAV 106
>02_05_1071 - 33876061-33877308,33877593-33877898
Length = 517
Score = 32.3 bits (70), Expect = 0.24
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = +3
Query: 153 PSNRTVCCRRAATAEPGSITQSPWSTTKLSSQCLVRTGTPLGRINVAPR*ALWATALGR 329
P+ R CC ++++ P + + L S+CL+R GR A WA GR
Sbjct: 20 PNPRPFCCSSSSSSAPPATAREDGDGGDLLSRCLLRIPRKSGRAAAAAAVERWARERGR 78
>05_01_0184 -
1298640-1298751,1298936-1299027,1299695-1299910,
1300045-1300614
Length = 329
Score = 31.5 bits (68), Expect = 0.42
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +3
Query: 294 PR*ALWATALGRAPAGYTSCAPPRTPPTGSPAAGLS 401
PR TA+GR AG AP PP G+PA L+
Sbjct: 31 PRRPTPTTAIGRVAAGRRPPAPATGPPQGTPAMSLA 66
>05_01_0182 + 1284900-1285469,1285604-1286612,1286698-1287107
Length = 662
Score = 31.5 bits (68), Expect = 0.42
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +3
Query: 294 PR*ALWATALGRAPAGYTSCAPPRTPPTGSPAAGLS 401
PR TA+GR AG AP PP G+PA L+
Sbjct: 31 PRRPTPTTAIGRVAAGRRPPAPATGPPQGTPAMSLA 66
>10_01_0176 - 1978073-1978324,1978425-1978604
Length = 143
Score = 31.1 bits (67), Expect = 0.55
Identities = 18/89 (20%), Positives = 39/89 (43%)
Frame = +2
Query: 8 AGPCFSNIDPELRLKATDADFVDVIHTDAGVYGLRDAVGHVDFFPNSGSQQPNCLLQTCS 187
AGP E+ + ++FV +H + G Y +++ ++ F N G P ++ T
Sbjct: 48 AGPWGGRGGQEITINLGPSEFVTEVHGEYGSYYGHNSIANLTFVTNRGRHGPFGIVDT-- 105
Query: 188 HSRAWLYYAESVVNNEAFLAVPCKDWDAF 274
W ++ + NN + + + D++
Sbjct: 106 --SGWDRFSVPIKNNSSIVGFFARTGDSY 132
>07_01_0808 - 6326767-6327788,6328270-6328459
Length = 403
Score = 29.1 bits (62), Expect = 2.2
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = -3
Query: 400 DSPAAGEPVGGVLGGAQEVYPAGARPSAVAHNAYLGATLILPKGVPVLTRHCEESFVVD 224
D A P+ ++ +Q + P G + V H +G T LPK VP E + D
Sbjct: 233 DEAADERPLFQIVSASQTILP-GTEDAIVGHLREVGLTFHLPKDVPEFISDSVEGALTD 290
>06_03_0251 +
18715023-18715106,18715274-18715396,18715509-18715611,
18716061-18716134,18716208-18716288,18716370-18716522,
18717435-18717506,18718313-18718396
Length = 257
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -3
Query: 325 PSAVAHNAYLGATLILPKGVPVLTRHCEESFVVD 224
P +HN Y+G T K VPV+T++ E D
Sbjct: 75 PRYCSHNFYVGGTSYAGKVVPVITQYISEGSKFD 108
>01_05_0095 + 18069688-18070416
Length = 242
Score = 28.7 bits (61), Expect = 2.9
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = -3
Query: 391 AAGEPVGGVLGGAQEVYPAGARPSAVAHNAYLGATLILPKGVPVLTRHCE 242
AAG P G AQ P AV H+A A+ LP+ V + H +
Sbjct: 111 AAGTPAGMGFAAAQAPAPPPGHVIAVGHHAGSVASYALPRWVYLAAHHLQ 160
>12_01_0809 + 7422137-7422251,7425578-7426353
Length = 296
Score = 28.3 bits (60), Expect = 3.9
Identities = 18/68 (26%), Positives = 32/68 (47%)
Frame = -3
Query: 406 LIDSPAAGEPVGGVLGGAQEVYPAGARPSAVAHNAYLGATLILPKGVPVLTRHCEESFVV 227
++D+P A GG+LGGA P A+P++ + G P+ R ++ V
Sbjct: 111 VVDAPPAAPSSGGLLGGA---IPYAAKPASSVAADHRGGGYRAPEARTAGARPAQKWDVF 167
Query: 226 DHGLCVIE 203
G+ ++E
Sbjct: 168 SFGVVLME 175
>05_01_0384 +
2997465-2999777,2999960-3000035,3003027-3003102,
3003571-3004442,3004592-3004773,3005206-3005295,
3005388-3005675,3005776-3005997,3006053-3006133,
3006634-3006861
Length = 1475
Score = 28.3 bits (60), Expect = 3.9
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = -3
Query: 388 AGEPVGGVLGGAQEVYPAGARPSAVAHNAYLGATLILP 275
A P G GG V PA A P+AVA N G P
Sbjct: 670 APPPAGPTAGGDVNVEPAPAVPAAVAVNGVAGEDAAAP 707
>09_02_0067 -
3812508-3813158,3813944-3814030,3814124-3814312,
3814475-3814603,3814917-3815003,3815126-3815563
Length = 526
Score = 27.9 bits (59), Expect = 5.1
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -3
Query: 268 VPVLTRHCEESFVVDHGLCVIEPGSAV 188
+ V+ + C E F + HGLC++ GS +
Sbjct: 110 IAVVHQPCSEVFELFHGLCLLAAGSTI 136
>06_01_0378 - 2717010-2717565,2718165-2718229,2718365-2719117
Length = 457
Score = 27.9 bits (59), Expect = 5.1
Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 6/54 (11%)
Frame = +3
Query: 252 LVRTGT----PLGRINVAPR*ALWATALGRAPAGYTSC--APPRTPPTGSPAAG 395
+VRT T P I+ P L + G A +C PP PPT PA G
Sbjct: 1 MVRTSTRQWHPHHNISTPPLMTLPPFSCGNGTAAPATCPATPPSPPPTSKPATG 54
>05_03_0458 + 14280953-14281866,14281964-14282912
Length = 620
Score = 27.9 bits (59), Expect = 5.1
Identities = 24/85 (28%), Positives = 32/85 (37%), Gaps = 5/85 (5%)
Frame = +3
Query: 153 PSNRTVCCRRAATAEPGSITQSPWSTTKLSSQCLVRTGTPLGRINVAPR*ALWATALGRA 332
P++ CR AA + P S + STT L T +P + P
Sbjct: 19 PTSPPSSCRNAAPSPPSSNSTPTSSTTPTVPPSLTTTSSPSSSPSSPPPLPPLQPTPPPL 78
Query: 333 PAGYTSCA-----PPRTPPTGSPAA 392
P SC+ PP PT SP+A
Sbjct: 79 PPTTLSCSSHPTPPPPPSPTTSPSA 103
>01_05_0071 +
17842918-17843222,17843391-17843646,17844257-17844520,
17844632-17845143,17845222-17845392,17845475-17845763,
17845849-17845959
Length = 635
Score = 27.9 bits (59), Expect = 5.1
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +2
Query: 263 WDAFRKNQCGAEISIMGYGTRPSARGIYFLRTAEDSPYGLSRRG 394
+DA C + +M T P+A G+ + T E +G RG
Sbjct: 184 YDAIEPTSCTLTVRVMPTFTVPAAEGLAYKPTPETRVHGAQLRG 227
>06_03_0429 - 20701107-20701534,20701628-20701847
Length = 215
Score = 27.5 bits (58), Expect = 6.8
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 291 APR*ALWATALGRAPAGYTSCAPPRTPPTGSPA 389
+P A A+ + + PA T+ PP PP SP+
Sbjct: 140 SPAPAPAASPIAKPPAAVTAATPPPPPPPPSPS 172
>01_01_0066 -
513578-513730,513809-513920,514000-514163,514369-514521,
514598-514736,514823-514923,514995-515666,515953-516038,
516112-516777,516874-517128,517231-517358,518645-518799,
518880-519133,519186-519260,519324-519399,519511-519644,
519871-520153,520692-520850,520940-521038,521142-521310,
521423-521653,522002-522114,524179-524310,524389-524469,
525641-525763
Length = 1570
Score = 27.5 bits (58), Expect = 6.8
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +3
Query: 318 ALGRAPAGYTSCAPPRTPPTGSPAAGLSMRT 410
A AP + APP PP G AG + T
Sbjct: 162 ASAAAPPPQAAAAPPAQPPAGGATAGQKLTT 192
>10_08_0973 -
21963754-21963936,21964089-21964383,21964504-21964616,
21964729-21964913,21965054-21965201,21965297-21965575,
21965657-21965761,21965936-21966178,21966426-21966486,
21966734-21966792
Length = 556
Score = 27.1 bits (57), Expect = 8.9
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 158 QPNCLLQTCSHSRAWLYYAESVVNNEAFLAVPCKDWDAFRKNQC 289
+P C++ TC+H RA + SV NE + P W+ +C
Sbjct: 268 RPGCVMNTCAH-RACPLHLGSV--NEGRIQCPYHGWEYSTDGKC 308
>09_06_0125 - 21011757-21012428
Length = 223
Score = 27.1 bits (57), Expect = 8.9
Identities = 31/90 (34%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Frame = +3
Query: 138 FRTADPSNRTVCCRRAATAEPGSITQSPWSTTKLSSQCLVRTGTPLG--RINVAPR*ALW 311
FRT DP+N+TV +R A+ +P S + C V +G LG + +VA L
Sbjct: 114 FRTCDPANQTV--QRWASGRDVVELAAPGSYYFI---CNV-SGHCLGGMKFSVAVGEPLP 167
Query: 312 ATALGRAPAGYTSCAPPRTPPTGSPAAGLS 401
+ P APP PP GS AA S
Sbjct: 168 PPSPPPPPPRAPFLAPPPPPPVGSGAAAAS 197
>09_04_0237 -
15936630-15937250,15937457-15937534,15938874-15938973,
15940414-15942278
Length = 887
Score = 27.1 bits (57), Expect = 8.9
Identities = 22/75 (29%), Positives = 34/75 (45%)
Frame = +3
Query: 9 PARASATSTPSCDSRRLTLTSWTSYTRTPEYTGSGTP*VTWTFFRTADPSNRTVCCRRAA 188
P SAT+T SC R + + T++T T + +P + + S+ T RR++
Sbjct: 723 PIAVSATNTASC--RHEGVATATAHTHPRTSTQAVSPLPSVAIAMPCEHSSTTRWSRRSS 780
Query: 189 TAEPGSITQSPWSTT 233
GS S STT
Sbjct: 781 LEATGSSITSARSTT 795
>05_05_0274 -
23755384-23755655,23755780-23756139,23756316-23756474,
23756757-23757235,23757344-23757475,23757723-23757797,
23757882-23757950,23758025-23758096,23758196-23758267,
23758348-23758419,23758526-23758687,23758786-23758857,
23758955-23759029,23759615-23759686,23759781-23759901,
23760051-23760138
Length = 783
Score = 27.1 bits (57), Expect = 8.9
Identities = 19/75 (25%), Positives = 30/75 (40%)
Frame = +3
Query: 18 ASATSTPSCDSRRLTLTSWTSYTRTPEYTGSGTP*VTWTFFRTADPSNRTVCCRRAATAE 197
+S+ T + R+ T SY +T G+ F DP+NR C R+ A
Sbjct: 335 SSSLQTVNLMDNRIVSTDTASYKKTLLLAGN-------PFCAEQDPNNRAFCSRQLQNAS 387
Query: 198 PGSITQSPWSTTKLS 242
P S + + + S
Sbjct: 388 PYSTSMEKCGSAQCS 402
>04_04_0445 + 25280642-25281796
Length = 384
Score = 27.1 bits (57), Expect = 8.9
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -3
Query: 274 KGVPVLTRHCEESFVVDHGLC 212
+GVP+LT C + V+H +C
Sbjct: 219 EGVPILTYMCNAAHFVEHAVC 239
>03_05_0813 -
27894593-27894915,27896164-27896422,27896513-27896728,
27896920-27897625,27897895-27898100
Length = 569
Score = 27.1 bits (57), Expect = 8.9
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = -3
Query: 295 GATLILPKGVPVLTRHCEESFVVDHGLCVI--EPGSAVAARLQQTVRLLGSAVRKKV 131
GA ++ + V R E+SFVVD G VI E V ARL +++L + + +V
Sbjct: 33 GADALVAARLIVNRRGMEQSFVVDSGATVITAEIALRVEARLAGDLKMLITPNKSRV 89
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,993,349
Number of Sequences: 37544
Number of extensions: 340414
Number of successful extensions: 1474
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1473
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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