SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32449
         (376 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_1282 + 27528159-27529148,27529549-27529614                      116   5e-27
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054...   115   1e-26
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306...   113   6e-26
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782...   113   6e-26
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731...   112   7e-26
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137...   112   1e-25
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910...   111   1e-25
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585...   111   2e-25
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32...   111   2e-25
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323...   107   4e-24
08_02_0441 - 17196352-17196536,17196780-17196906,17198018-171981...    57   5e-09
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207...    50   6e-07
03_06_0192 + 32230953-32231030,32231130-32231485,32232250-322324...    44   5e-05
04_04_1515 + 34117383-34117732,34117833-34117918,34118227-341182...    41   4e-04
01_01_1170 - 9318332-9318461,9318551-9318613,9318694-9318744,931...    34   0.042
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238...    34   0.042
08_01_0628 - 5460030-5462960                                           29   1.6  
03_05_0780 + 27646936-27647084,27647168-27647289,27649380-276494...    29   1.6  
02_02_0520 + 11152718-11153600,11153736-11153917,11154160-111542...    28   2.7  
12_02_1212 - 27043723-27044241,27044483-27044850,27045513-27045753     27   6.3  
08_01_0810 - 7857946-7858422                                           27   6.3  
06_03_1360 + 29558789-29559020,29559203-29559378,29560285-295603...    26   8.4  
05_01_0313 - 2461487-2461861,2461929-2462513,2462819-2464154,246...    26   8.4  

>12_02_1282 + 27528159-27529148,27529549-27529614
          Length = 351

 Score =  116 bits (280), Expect = 5e-27
 Identities = 53/67 (79%), Positives = 60/67 (89%)
 Frame = +1

Query: 142 SEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITXGNERXRCPEALFQ 321
           +EREIVRD+KEKL Y+ALDF+QEMATAA  +S+EKSYELPDGQVIT G ER RCPE LFQ
Sbjct: 206 AEREIVRDVKEKLSYIALDFDQEMATAATGSSVEKSYELPDGQVITIGAERFRCPEVLFQ 265

Query: 322 PSFLGME 342
           PSF+GME
Sbjct: 266 PSFVGME 272



 Score = 56.8 bits (131), Expect = 5e-09
 Identities = 27/30 (90%), Positives = 27/30 (90%)
 Frame = +3

Query: 51  AILRLDLAGRDLTXYXXKILTERGYSFTTT 140
           AILRLDLAGRDLT Y  KILTERGYSFTTT
Sbjct: 176 AILRLDLAGRDLTDYLMKILTERGYSFTTT 205


>01_06_1455 +
           37504175-37504231,37504357-37504750,37504865-37505478,
           37506021-37506086
          Length = 376

 Score =  115 bits (276), Expect = 1e-26
 Identities = 53/67 (79%), Positives = 60/67 (89%)
 Frame = +1

Query: 142 SEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITXGNERXRCPEALFQ 321
           +EREIVRDIKEKL YVALD+EQE+ TA +S+S+EKSYELPDGQVIT G ER RCPE LFQ
Sbjct: 205 AEREIVRDIKEKLAYVALDYEQELDTARSSSSIEKSYELPDGQVITIGAERFRCPEVLFQ 264

Query: 322 PSFLGME 342
           PSF+GME
Sbjct: 265 PSFIGME 271



 Score = 53.2 bits (122), Expect = 6e-08
 Identities = 26/30 (86%), Positives = 26/30 (86%)
 Frame = +3

Query: 51  AILRLDLAGRDLTXYXXKILTERGYSFTTT 140
           AILRLDLAGRDLT    KILTERGYSFTTT
Sbjct: 175 AILRLDLAGRDLTDNLMKILTERGYSFTTT 204


>11_01_0403 +
           3059650-3059709,3059807-3060200,3060275-3060930,
           3060979-3061044
          Length = 391

 Score =  113 bits (271), Expect = 6e-26
 Identities = 52/67 (77%), Positives = 59/67 (88%)
 Frame = +1

Query: 142 SEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITXGNERXRCPEALFQ 321
           +EREIVRDIKEKL YVALD+EQE+  A +S+S+EKSYELPDGQVIT G ER RCPE LFQ
Sbjct: 206 AEREIVRDIKEKLAYVALDYEQELEAAKSSSSVEKSYELPDGQVITIGAERFRCPEVLFQ 265

Query: 322 PSFLGME 342
           PSF+GME
Sbjct: 266 PSFIGME 272



 Score = 53.2 bits (122), Expect = 6e-08
 Identities = 26/30 (86%), Positives = 26/30 (86%)
 Frame = +3

Query: 51  AILRLDLAGRDLTXYXXKILTERGYSFTTT 140
           AILRLDLAGRDLT    KILTERGYSFTTT
Sbjct: 176 AILRLDLAGRDLTDSLMKILTERGYSFTTT 205


>01_07_0285 -
           42476767-42476832,42476990-42477603,42477821-42478214,
           42478301-42478360
          Length = 377

 Score =  113 bits (271), Expect = 6e-26
 Identities = 52/67 (77%), Positives = 59/67 (88%)
 Frame = +1

Query: 142 SEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITXGNERXRCPEALFQ 321
           +EREIVRDIKEKL YVALD+EQE+ TA  S+S+EKSYELPDGQVIT G+ER RCPE LFQ
Sbjct: 206 AEREIVRDIKEKLAYVALDYEQELETAKNSSSIEKSYELPDGQVITIGSERFRCPEVLFQ 265

Query: 322 PSFLGME 342
           PS +GME
Sbjct: 266 PSMIGME 272



 Score = 51.6 bits (118), Expect = 2e-07
 Identities = 25/30 (83%), Positives = 26/30 (86%)
 Frame = +3

Query: 51  AILRLDLAGRDLTXYXXKILTERGYSFTTT 140
           AILRLDLAGRDLT    KILTERGYSFTT+
Sbjct: 176 AILRLDLAGRDLTDSLMKILTERGYSFTTS 205


>03_05_0926 +
           28871800-28871859,28871943-28872336,28872586-28873199,
           28873281-28873346
          Length = 377

 Score =  112 bits (270), Expect = 7e-26
 Identities = 51/67 (76%), Positives = 59/67 (88%)
 Frame = +1

Query: 142 SEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITXGNERXRCPEALFQ 321
           +EREIVRD+KEKL Y+ALD++QEM TA  S+S+EKSYELPDGQVIT G ER RCPE LFQ
Sbjct: 206 AEREIVRDMKEKLSYIALDYDQEMETAKTSSSVEKSYELPDGQVITIGAERFRCPEVLFQ 265

Query: 322 PSFLGME 342
           PSF+GME
Sbjct: 266 PSFIGME 272



 Score = 56.8 bits (131), Expect = 5e-09
 Identities = 27/30 (90%), Positives = 27/30 (90%)
 Frame = +3

Query: 51  AILRLDLAGRDLTXYXXKILTERGYSFTTT 140
           AILRLDLAGRDLT Y  KILTERGYSFTTT
Sbjct: 176 AILRLDLAGRDLTDYLMKILTERGYSFTTT 205


>03_06_0585 -
           34912159-34912224,34912634-34913247,34913350-34913734,
           34913824-34913883
          Length = 374

 Score =  112 bits (269), Expect = 1e-25
 Identities = 51/67 (76%), Positives = 59/67 (88%)
 Frame = +1

Query: 142 SEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITXGNERXRCPEALFQ 321
           +EREIVRDIKEKL Y+ALD+EQE+ TA +S+S+EKSYELPDGQVIT G ER RCPE LFQ
Sbjct: 203 AEREIVRDIKEKLAYIALDYEQELETAKSSSSVEKSYELPDGQVITIGAERFRCPEVLFQ 262

Query: 322 PSFLGME 342
           PS +GME
Sbjct: 263 PSLIGME 269



 Score = 53.2 bits (122), Expect = 6e-08
 Identities = 26/30 (86%), Positives = 26/30 (86%)
 Frame = +3

Query: 51  AILRLDLAGRDLTXYXXKILTERGYSFTTT 140
           AILRLDLAGRDLT    KILTERGYSFTTT
Sbjct: 173 AILRLDLAGRDLTDCLMKILTERGYSFTTT 202


>10_08_0597 +
           19089616-19089675,19089789-19090182,19090451-19091064,
           19091160-19091225
          Length = 377

 Score =  111 bits (268), Expect = 1e-25
 Identities = 51/67 (76%), Positives = 59/67 (88%)
 Frame = +1

Query: 142 SEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITXGNERXRCPEALFQ 321
           +EREIVRDIKEKL YVALD+EQE+ TA +S+S+EKSYELPDGQVIT G ER RCPE +FQ
Sbjct: 206 AEREIVRDIKEKLAYVALDYEQELETAKSSSSVEKSYELPDGQVITIGAERFRCPEVMFQ 265

Query: 322 PSFLGME 342
           PS +GME
Sbjct: 266 PSLIGME 272



 Score = 51.6 bits (118), Expect = 2e-07
 Identities = 25/30 (83%), Positives = 26/30 (86%)
 Frame = +3

Query: 51  AILRLDLAGRDLTXYXXKILTERGYSFTTT 140
           AILRLDLAGRDLT    KILTERGYSFTT+
Sbjct: 176 AILRLDLAGRDLTDSLMKILTERGYSFTTS 205


>05_04_0450 -
           21356877-21356942,21357482-21358095,21358173-21358566,
           21358648-21358704
          Length = 376

 Score =  111 bits (267), Expect = 2e-25
 Identities = 50/67 (74%), Positives = 60/67 (89%)
 Frame = +1

Query: 142 SEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITXGNERXRCPEALFQ 321
           +EREIVRDIKEKL YVALD+EQE+ T+ +S+S+EKSYE+PDGQVIT G+ER RCPE LFQ
Sbjct: 205 AEREIVRDIKEKLAYVALDYEQELETSRSSSSVEKSYEMPDGQVITIGSERFRCPEVLFQ 264

Query: 322 PSFLGME 342
           PS +GME
Sbjct: 265 PSLVGME 271



 Score = 50.8 bits (116), Expect = 3e-07
 Identities = 24/30 (80%), Positives = 26/30 (86%)
 Frame = +3

Query: 51  AILRLDLAGRDLTXYXXKILTERGYSFTTT 140
           AILRLDLAGRDLT +  KILTERGYS TT+
Sbjct: 175 AILRLDLAGRDLTDHLMKILTERGYSLTTS 204


>05_01_0047 -
           323097-323162,323287-323900,324233-324626,324718-324777
          Length = 377

 Score =  111 bits (267), Expect = 2e-25
 Identities = 52/67 (77%), Positives = 58/67 (86%)
 Frame = +1

Query: 142 SEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITXGNERXRCPEALFQ 321
           +EREIVRDIKEKL YVALD+EQE+ TA  S+S+EKSYELPDGQVIT G ER RCPE LFQ
Sbjct: 206 AEREIVRDIKEKLAYVALDYEQELETAKNSSSVEKSYELPDGQVITIGAERFRCPEVLFQ 265

Query: 322 PSFLGME 342
           PS +GME
Sbjct: 266 PSMIGME 272



 Score = 51.6 bits (118), Expect = 2e-07
 Identities = 25/30 (83%), Positives = 26/30 (86%)
 Frame = +3

Query: 51  AILRLDLAGRDLTXYXXKILTERGYSFTTT 140
           AILRLDLAGRDLT    KILTERGYSFTT+
Sbjct: 176 AILRLDLAGRDLTDSLMKILTERGYSFTTS 205


>12_01_0409 -
           3230853-3230918,3231372-3231994,3232454-3232847,
           3233000-3233059
          Length = 380

 Score =  107 bits (256), Expect = 4e-24
 Identities = 53/70 (75%), Positives = 59/70 (84%), Gaps = 3/70 (4%)
 Frame = +1

Query: 142 SEREIVRDIKEKLCYVALDFEQEMATAAA---STSLEKSYELPDGQVITXGNERXRCPEA 312
           +EREIVRDIKEKL YVALD+EQE+  AAA   S+S+EKSYELPDGQVIT G ER RCPE 
Sbjct: 206 AEREIVRDIKEKLAYVALDYEQELNAAAAAKNSSSVEKSYELPDGQVITIGAERFRCPEV 265

Query: 313 LFQPSFLGME 342
           LFQPS +GME
Sbjct: 266 LFQPSLVGME 275



 Score = 53.2 bits (122), Expect = 6e-08
 Identities = 26/30 (86%), Positives = 26/30 (86%)
 Frame = +3

Query: 51  AILRLDLAGRDLTXYXXKILTERGYSFTTT 140
           AILRLDLAGRDLT    KILTERGYSFTTT
Sbjct: 176 AILRLDLAGRDLTDALMKILTERGYSFTTT 205


>08_02_0441 -
           17196352-17196536,17196780-17196906,17198018-17198101,
           17198282-17198348,17198575-17198633,17199211-17199336,
           17199406-17199474,17199545-17199653,17199692-17199760,
           17199876-17199979,17200518-17200567,17200696-17200774,
           17200867-17200938,17201083-17201217,17201311-17201421,
           17202088-17202129
          Length = 495

 Score = 56.8 bits (131), Expect = 5e-09
 Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 15/73 (20%)
 Frame = +1

Query: 151 EIVRDIKEKLCYVAL---------------DFEQEMATAAASTSLEKSYELPDGQVITXG 285
           E VR+IKEKLCY++L               D+++E      +T L KSY LPDG+VI  G
Sbjct: 208 ETVREIKEKLCYLSLLSHFIELKRENMYSYDYKREYQLGLETTILVKSYTLPDGRVIKVG 267

Query: 286 NERXRCPEALFQP 324
            ER + PEALF P
Sbjct: 268 TERFQAPEALFTP 280



 Score = 27.9 bits (59), Expect = 2.7
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = +3

Query: 60  RLDLAGRDLTXYXXKILTERGYS 128
           R+++AGR +T Y   +L+ RGY+
Sbjct: 178 RMNVAGRHITSYLVDLLSRRGYA 200


>08_01_0254 +
           2078380-2078392,2078487-2078578,2079579-2079698,
           2079924-2080097,2080184-2080257,2080847-2080927,
           2081306-2081366,2081437-2081486,2082278-2082332,
           2082599-2082676,2082757-2082810,2083703-2083756,
           2083846-2083906,2084229-2084280,2085118-2085184,
           2085393-2085452,2085546-2085608,2085752-2085814,
           2086337-2086401,2086620-2086688,2086742-2086847
          Length = 503

 Score = 50.0 bits (114), Expect = 6e-07
 Identities = 28/60 (46%), Positives = 34/60 (56%)
 Frame = +1

Query: 148 REIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITXGNERXRCPEALFQPS 327
           R I  DIKE +C V      E+A A   T+   SYELPDGQ I  G +R + P+ LF PS
Sbjct: 303 RAIASDIKESVCRVPDTAFDEVAYANVPTT---SYELPDGQTIEVGADRFKIPDILFNPS 359


>03_06_0192 +
           32230953-32231030,32231130-32231485,32232250-32232425,
           32233857-32234038,32234260-32234443,32235192-32235259,
           32235343-32235495
          Length = 398

 Score = 43.6 bits (98), Expect = 5e-05
 Identities = 24/48 (50%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
 Frame = +1

Query: 202 EQEMATAAASTSLE-KSYELPDGQVITXGNERXRCPEALFQPSFLGME 342
           E +MA  A  +S   + + LPDGQVIT   ER    EALFQP  LG+E
Sbjct: 241 EDQMAFEAIGSSCRPERHTLPDGQVITIEKERYIVGEALFQPHILGLE 288


>04_04_1515 +
           34117383-34117732,34117833-34117918,34118227-34118297,
           34118457-34118524,34118692-34118753,34119010-34119107,
           34119545-34119626,34119935-34120077,34120233-34120381,
           34120461-34120594,34120714-34120832,34120926-34121014,
           34121398-34121515
          Length = 522

 Score = 40.7 bits (91), Expect = 4e-04
 Identities = 25/61 (40%), Positives = 30/61 (49%)
 Frame = +1

Query: 157 VRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITXGNERXRCPEALFQPSFLG 336
           VR IKEKLCYVA D+E E          + S E+      T   ER +  E LFQP   G
Sbjct: 315 VRTIKEKLCYVAADYEAE-----KRKDTQASCEVDGEGWFTLSEERFKTAEILFQPQIGG 369

Query: 337 M 339
           +
Sbjct: 370 V 370


>01_01_1170 -
           9318332-9318461,9318551-9318613,9318694-9318744,
           9318837-9318921,9319005-9319068,9319139-9319340,
           9319808-9320502
          Length = 429

 Score = 33.9 bits (74), Expect = 0.042
 Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
 Frame = +1

Query: 145 EREIVRDIKEKLCYVALDFEQEMATAAASTS---LEKSYELPDG 267
           E  ++ D KEKLC+V+LD   ++  A  S++      SY LPDG
Sbjct: 206 ETLLIDDAKEKLCFVSLDVPGDLRLARLSSNDNPFRCSYILPDG 249


>01_01_0292 -
           2387653-2387711,2388061-2388684,2388814-2389104,
           2389338-2389390,2390496-2390968,2391090-2391432,
           2391793-2391911,2392081-2392512,2392657-2392747,
           2392833-2392942,2393681-2393875,2394581-2394622,
           2395144-2395268,2395856-2395926,2396047-2396147
          Length = 1042

 Score = 33.9 bits (74), Expect = 0.042
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +1

Query: 274 ITXGNERXRCPEALFQPSFLGME 342
           I+ G ER RCPE LFQP  +G++
Sbjct: 575 ISIGIERFRCPEILFQPGMIGID 597


>08_01_0628 - 5460030-5462960
          Length = 976

 Score = 28.7 bits (61), Expect = 1.6
 Identities = 15/28 (53%), Positives = 16/28 (57%)
 Frame = +3

Query: 165 HQGEALLCRPRLRAGDGHRCRLHXPREV 248
           HQG ALLC    +   GHRC  H  REV
Sbjct: 369 HQGWALLCSVVFKDVPGHRCPSHL-REV 395


>03_05_0780 +
           27646936-27647084,27647168-27647289,27649380-27649458,
           27650346-27650427,27650483-27650600,27650695-27651050,
           27651404-27652222,27652846-27653265,27653426-27653437
          Length = 718

 Score = 28.7 bits (61), Expect = 1.6
 Identities = 17/29 (58%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
 Frame = +3

Query: 150 GNRS*HQGEALLCRPRL--RAGDGHRCRL 230
           G  S HQG  LLCRP L  R G  HR RL
Sbjct: 367 GISSSHQGHLLLCRPCLSHRTGLLHRTRL 395


>02_02_0520 +
           11152718-11153600,11153736-11153917,11154160-11154249,
           11154343-11154627,11154776-11154994,11155112-11155339
          Length = 628

 Score = 27.9 bits (59), Expect = 2.7
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
 Frame = +1

Query: 202 EQEMATAAASTSLEKSY-ELPDGQ-VITXGNERXRCPEAL 315
           E E++ A      +K Y +L  G+ V++ GNE+ RCP  L
Sbjct: 7   ESELSDADIDDYADKCYMDLKSGKPVVSLGNEKFRCPFCL 46


>12_02_1212 - 27043723-27044241,27044483-27044850,27045513-27045753
          Length = 375

 Score = 26.6 bits (56), Expect = 6.3
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = +1

Query: 106 SSPRGVTRSPPPSEREIVRDIKEKLCYVALDFEQEMATAAASTS 237
           S     TRS   S+  +V DI+ +     LDF    A++++ST+
Sbjct: 291 SDAETTTRSHSHSQSHLVADIRHRQSPFMLDFHAGTASSSSSTA 334


>08_01_0810 - 7857946-7858422
          Length = 158

 Score = 26.6 bits (56), Expect = 6.3
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +2

Query: 68  LGWSRLDRXPXEDPHREGLLVHHHR 142
           L W+R+   P  D H E LL   HR
Sbjct: 50  LSWTRMGPWPSSDDHSEFLLSPEHR 74


>06_03_1360 +
           29558789-29559020,29559203-29559378,29560285-29560346,
           29560426-29561212,29561516-29562244
          Length = 661

 Score = 26.2 bits (55), Expect = 8.4
 Identities = 17/52 (32%), Positives = 27/52 (51%)
 Frame = +1

Query: 139 PSEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITXGNER 294
           PS   +VRD+  +   V + +    A+AAA  +LE+ +E   GQ    G E+
Sbjct: 145 PSIPNLVRDLGSRQKSVPIRYTDTFASAAA--ALEREWEEMTGQSAQTGVEK 194


>05_01_0313 -
           2461487-2461861,2461929-2462513,2462819-2464154,
           2464231-2464338,2464421-2464743
          Length = 908

 Score = 26.2 bits (55), Expect = 8.4
 Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
 Frame = +1

Query: 106 SSPR--GVTRSPPPSEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVIT 279
           SSPR   VTR+PPP E   V  + E+    A+D  Q M        +E +  + DG    
Sbjct: 432 SSPRLQFVTRAPPPQEHGEV--LTERDVMAAMDTFQLMLKDGGEV-IEFAAFIIDGD--- 485

Query: 280 XGNERXRCPEALFQPSFLGMEIVRHPR 360
            G  R RC     + S  G +++ H R
Sbjct: 486 GGQRRRRCATIAVEVS-NGSKLLDHER 511


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,335,444
Number of Sequences: 37544
Number of extensions: 194870
Number of successful extensions: 629
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 628
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 600754600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -