Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32449
(376 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 132 1e-31
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 132 1e-31
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 132 1e-31
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 132 1e-31
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 132 1e-31
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 132 1e-31
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 131 2e-31
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 131 2e-31
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 131 2e-31
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 131 2e-31
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 120 3e-28
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 74 4e-14
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 56 1e-08
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 32 0.15
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 30 0.62
U97550-1|AAK18983.2| 1065|Caenorhabditis elegans Hypothetical pr... 27 3.3
AC024859-12|AAK29966.1| 477|Caenorhabditis elegans Hypothetical... 27 5.8
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 27 5.8
Z81054-7|CAB02881.1| 472|Caenorhabditis elegans Hypothetical pr... 26 7.6
AF002197-4|AAD34659.1| 393|Caenorhabditis elegans Hypothetical ... 26 7.6
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 132 bits (318), Expect = 1e-31
Identities = 62/67 (92%), Positives = 65/67 (97%)
Frame = +1
Query: 142 SEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITXGNERXRCPEALFQ 321
+EREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT GNER RCPEALFQ
Sbjct: 205 AEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQ 264
Query: 322 PSFLGME 342
PSFLGME
Sbjct: 265 PSFLGME 271
Score = 56.8 bits (131), Expect = 5e-09
Identities = 27/30 (90%), Positives = 27/30 (90%)
Frame = +3
Query: 51 AILRLDLAGRDLTXYXXKILTERGYSFTTT 140
AILRLDLAGRDLT Y KILTERGYSFTTT
Sbjct: 175 AILRLDLAGRDLTDYLMKILTERGYSFTTT 204
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 132 bits (318), Expect = 1e-31
Identities = 62/67 (92%), Positives = 65/67 (97%)
Frame = +1
Query: 142 SEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITXGNERXRCPEALFQ 321
+EREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT GNER RCPEALFQ
Sbjct: 205 AEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQ 264
Query: 322 PSFLGME 342
PSFLGME
Sbjct: 265 PSFLGME 271
Score = 56.8 bits (131), Expect = 5e-09
Identities = 27/30 (90%), Positives = 27/30 (90%)
Frame = +3
Query: 51 AILRLDLAGRDLTXYXXKILTERGYSFTTT 140
AILRLDLAGRDLT Y KILTERGYSFTTT
Sbjct: 175 AILRLDLAGRDLTDYLMKILTERGYSFTTT 204
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 132 bits (318), Expect = 1e-31
Identities = 62/67 (92%), Positives = 65/67 (97%)
Frame = +1
Query: 142 SEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITXGNERXRCPEALFQ 321
+EREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT GNER RCPEALFQ
Sbjct: 205 AEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQ 264
Query: 322 PSFLGME 342
PSFLGME
Sbjct: 265 PSFLGME 271
Score = 56.8 bits (131), Expect = 5e-09
Identities = 27/30 (90%), Positives = 27/30 (90%)
Frame = +3
Query: 51 AILRLDLAGRDLTXYXXKILTERGYSFTTT 140
AILRLDLAGRDLT Y KILTERGYSFTTT
Sbjct: 175 AILRLDLAGRDLTDYLMKILTERGYSFTTT 204
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 132 bits (318), Expect = 1e-31
Identities = 62/67 (92%), Positives = 65/67 (97%)
Frame = +1
Query: 142 SEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITXGNERXRCPEALFQ 321
+EREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT GNER RCPEALFQ
Sbjct: 161 AEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQ 220
Query: 322 PSFLGME 342
PSFLGME
Sbjct: 221 PSFLGME 227
Score = 56.8 bits (131), Expect = 5e-09
Identities = 27/30 (90%), Positives = 27/30 (90%)
Frame = +3
Query: 51 AILRLDLAGRDLTXYXXKILTERGYSFTTT 140
AILRLDLAGRDLT Y KILTERGYSFTTT
Sbjct: 131 AILRLDLAGRDLTDYLMKILTERGYSFTTT 160
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 132 bits (318), Expect = 1e-31
Identities = 62/67 (92%), Positives = 65/67 (97%)
Frame = +1
Query: 142 SEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITXGNERXRCPEALFQ 321
+EREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT GNER RCPEALFQ
Sbjct: 191 AEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQ 250
Query: 322 PSFLGME 342
PSFLGME
Sbjct: 251 PSFLGME 257
Score = 56.8 bits (131), Expect = 5e-09
Identities = 27/30 (90%), Positives = 27/30 (90%)
Frame = +3
Query: 51 AILRLDLAGRDLTXYXXKILTERGYSFTTT 140
AILRLDLAGRDLT Y KILTERGYSFTTT
Sbjct: 161 AILRLDLAGRDLTDYLMKILTERGYSFTTT 190
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 132 bits (318), Expect = 1e-31
Identities = 62/67 (92%), Positives = 65/67 (97%)
Frame = +1
Query: 142 SEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITXGNERXRCPEALFQ 321
+EREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT GNER RCPEALFQ
Sbjct: 205 AEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQ 264
Query: 322 PSFLGME 342
PSFLGME
Sbjct: 265 PSFLGME 271
Score = 56.8 bits (131), Expect = 5e-09
Identities = 27/30 (90%), Positives = 27/30 (90%)
Frame = +3
Query: 51 AILRLDLAGRDLTXYXXKILTERGYSFTTT 140
AILRLDLAGRDLT Y KILTERGYSFTTT
Sbjct: 175 AILRLDLAGRDLTDYLMKILTERGYSFTTT 204
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 131 bits (316), Expect = 2e-31
Identities = 61/67 (91%), Positives = 65/67 (97%)
Frame = +1
Query: 142 SEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITXGNERXRCPEALFQ 321
+EREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT GNER RCPEA+FQ
Sbjct: 205 AEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQ 264
Query: 322 PSFLGME 342
PSFLGME
Sbjct: 265 PSFLGME 271
Score = 56.8 bits (131), Expect = 5e-09
Identities = 27/30 (90%), Positives = 27/30 (90%)
Frame = +3
Query: 51 AILRLDLAGRDLTXYXXKILTERGYSFTTT 140
AILRLDLAGRDLT Y KILTERGYSFTTT
Sbjct: 175 AILRLDLAGRDLTDYLMKILTERGYSFTTT 204
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 131 bits (316), Expect = 2e-31
Identities = 61/67 (91%), Positives = 65/67 (97%)
Frame = +1
Query: 142 SEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITXGNERXRCPEALFQ 321
+EREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT GNER RCPEA+FQ
Sbjct: 205 AEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQ 264
Query: 322 PSFLGME 342
PSFLGME
Sbjct: 265 PSFLGME 271
Score = 56.8 bits (131), Expect = 5e-09
Identities = 27/30 (90%), Positives = 27/30 (90%)
Frame = +3
Query: 51 AILRLDLAGRDLTXYXXKILTERGYSFTTT 140
AILRLDLAGRDLT Y KILTERGYSFTTT
Sbjct: 175 AILRLDLAGRDLTDYLMKILTERGYSFTTT 204
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 131 bits (316), Expect = 2e-31
Identities = 61/67 (91%), Positives = 65/67 (97%)
Frame = +1
Query: 142 SEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITXGNERXRCPEALFQ 321
+EREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT GNER RCPEA+FQ
Sbjct: 205 AEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQ 264
Query: 322 PSFLGME 342
PSFLGME
Sbjct: 265 PSFLGME 271
Score = 56.8 bits (131), Expect = 5e-09
Identities = 27/30 (90%), Positives = 27/30 (90%)
Frame = +3
Query: 51 AILRLDLAGRDLTXYXXKILTERGYSFTTT 140
AILRLDLAGRDLT Y KILTERGYSFTTT
Sbjct: 175 AILRLDLAGRDLTDYLMKILTERGYSFTTT 204
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 131 bits (316), Expect = 2e-31
Identities = 61/67 (91%), Positives = 65/67 (97%)
Frame = +1
Query: 142 SEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITXGNERXRCPEALFQ 321
+EREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT GNER RCPEA+FQ
Sbjct: 205 AEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQ 264
Query: 322 PSFLGME 342
PSFLGME
Sbjct: 265 PSFLGME 271
Score = 56.8 bits (131), Expect = 5e-09
Identities = 27/30 (90%), Positives = 27/30 (90%)
Frame = +3
Query: 51 AILRLDLAGRDLTXYXXKILTERGYSFTTT 140
AILRLDLAGRDLT Y KILTERGYSFTTT
Sbjct: 175 AILRLDLAGRDLTDYLMKILTERGYSFTTT 204
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 120 bits (289), Expect = 3e-28
Identities = 55/67 (82%), Positives = 61/67 (91%)
Frame = +1
Query: 142 SEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITXGNERXRCPEALFQ 321
+EREIVRDIKEKLCYVA DFE E+A AA+S+SLEKSYELPDGQVIT GNER RCPE LFQ
Sbjct: 204 AEREIVRDIKEKLCYVAHDFESELAAAASSSSLEKSYELPDGQVITIGNERFRCPEVLFQ 263
Query: 322 PSFLGME 342
P+F+GME
Sbjct: 264 PAFIGME 270
Score = 53.2 bits (122), Expect = 6e-08
Identities = 25/30 (83%), Positives = 26/30 (86%)
Frame = +3
Query: 51 AILRLDLAGRDLTXYXXKILTERGYSFTTT 140
AI RLDLAGRDLT Y KILTERGY+FTTT
Sbjct: 174 AIQRLDLAGRDLTDYMMKILTERGYTFTTT 203
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 73.7 bits (173), Expect = 4e-14
Identities = 34/64 (53%), Positives = 41/64 (64%)
Frame = +1
Query: 151 EIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITXGNERXRCPEALFQPSF 330
E VR +KEKLCY+A D EQE A +T L + Y LPDG+VI G ER PE LFQP
Sbjct: 211 ETVRQMKEKLCYIAYDVEQEERLALETTVLSQQYTLPDGRVIRLGGERFEAPEILFQPHL 270
Query: 331 LGME 342
+ +E
Sbjct: 271 INVE 274
Score = 40.3 bits (90), Expect = 4e-04
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +3
Query: 45 HEAILRLDLAGRDLTXYXXKILTERGYSF 131
H RLD+AGRD+T Y K+L +RGY+F
Sbjct: 176 HHLTRRLDIAGRDITKYLIKLLLQRGYNF 204
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 55.6 bits (128), Expect = 1e-08
Identities = 29/67 (43%), Positives = 38/67 (56%)
Frame = +1
Query: 142 SEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITXGNERXRCPEALFQ 321
+E EIVR++KE CY+ALD T + S++ SY LPD I N R PE LF+
Sbjct: 208 NEFEIVREMKENACYLALD-----PTKVENNSVKSSYALPDTTKIEISNSLFRAPEVLFK 262
Query: 322 PSFLGME 342
P +G E
Sbjct: 263 PDLIGTE 269
Score = 34.7 bits (76), Expect = 0.022
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +3
Query: 51 AILRLDLAGRDLTXYXXKILTERGYSF 131
AI R+DLAGRD+T Y +L GY F
Sbjct: 178 AIQRMDLAGRDVTEYLRVLLRREGYEF 204
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 31.9 bits (69), Expect = 0.15
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Frame = +1
Query: 115 RGVTRSPPPSEREIVRDIKEKLCYVALDFEQEMATAAAST--SLEKSYELPDGQV-ITXG 285
+G+ P E+ I+R E+ YV D+++E + T SL+ P Q
Sbjct: 370 KGLYAFQSPVEKLILRFALEQTTYVPEDYQKEEKSENKETRISLDAFTPSPGMQTRFDID 429
Query: 286 NERXRCPEALFQPSFLGME 342
N R C E LF+P G++
Sbjct: 430 NSRFLCTEGLFKPKKWGLD 448
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 29.9 bits (64), Expect = 0.62
Identities = 28/89 (31%), Positives = 31/89 (34%), Gaps = 8/89 (8%)
Frame = +1
Query: 133 PPPSEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDG-QVIT-------XGN 288
P E+ + IKEK CYV D +E T K DG IT G
Sbjct: 223 PAEQSYEVAKMIKEKFCYVCPDVMKEF--VKYDTDAAKWLRTYDGINSITKKPFNVDVGY 280
Query: 289 ERXRCPEALFQPSFLGMEIVRHPRDRXPT 375
ER PE F P F E D T
Sbjct: 281 ERFLGPEIFFHPEFCNPEFTTPISDTIDT 309
>U97550-1|AAK18983.2| 1065|Caenorhabditis elegans Hypothetical
protein T20F7.5 protein.
Length = 1065
Score = 27.5 bits (58), Expect = 3.3
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +2
Query: 32 AGNSARGHPPSGLGWSRLDR 91
AGNS RG S LGWS R
Sbjct: 535 AGNSNRGRSSSNLGWSSTTR 554
>AC024859-12|AAK29966.1| 477|Caenorhabditis elegans Hypothetical
protein Y71H2AM.16 protein.
Length = 477
Score = 26.6 bits (56), Expect = 5.8
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 107 PHREGLLVHHHRLRGKSFV 163
P+ L+V HRL GKSFV
Sbjct: 271 PYTAALIVELHRLNGKSFV 289
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 26.6 bits (56), Expect = 5.8
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +1
Query: 250 YELPDGQVITXGNERXRCPEALFQPSFLGME 342
Y P+G G ER + PE LF +L E
Sbjct: 293 YAFPNGYTKEFGAERIKLPECLFDLGYLKAE 323
>Z81054-7|CAB02881.1| 472|Caenorhabditis elegans Hypothetical
protein F01D4.4 protein.
Length = 472
Score = 26.2 bits (55), Expect = 7.6
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 139 PSEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYEL-PDGQVITXGNE 291
P RE++ E LC A++ ++E+ STS+ + PDG + G E
Sbjct: 105 PIGRELLLRFAETLCNGAINNDKEIVQLLNSTSIHILPSMNPDGFELALGTE 156
>AF002197-4|AAD34659.1| 393|Caenorhabditis elegans Hypothetical
protein F20H11.6 protein.
Length = 393
Score = 26.2 bits (55), Expect = 7.6
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -3
Query: 134 GERVTPLGEDLXXVXGQVATSQVQTEDGLVPNYLQ 30
G V P + L G + VQT+DGL YL+
Sbjct: 265 GTVVPPRKKGLPITTGSIVKRTVQTKDGLQTQYLK 299
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,534,396
Number of Sequences: 27780
Number of extensions: 123958
Number of successful extensions: 345
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 344
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 546325158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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