Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32447
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z54237-10|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical p... 45 4e-05
Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical pr... 45 4e-05
Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical pr... 45 4e-05
Z54237-7|CAB54312.2| 645|Caenorhabditis elegans Hypothetical pr... 45 4e-05
Z54237-6|CAE52903.1| 425|Caenorhabditis elegans Hypothetical pr... 45 4e-05
Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical p... 45 4e-05
Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical p... 45 4e-05
Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical p... 45 4e-05
Z54235-9|CAB54190.2| 645|Caenorhabditis elegans Hypothetical pr... 45 4e-05
Z54235-8|CAE52906.1| 425|Caenorhabditis elegans Hypothetical pr... 45 4e-05
U97593-6|AAB52879.2| 925|Caenorhabditis elegans Prion-like-(q/n... 40 0.001
U97593-5|AAB52880.1| 1175|Caenorhabditis elegans Prion-like-(q/n... 40 0.001
Z48717-10|CAA88612.2| 423|Caenorhabditis elegans Hypothetical p... 37 0.007
Z48584-9|CAA88478.2| 423|Caenorhabditis elegans Hypothetical pr... 37 0.007
AL031635-9|CAH04762.1| 1136|Caenorhabditis elegans Hypothetical ... 31 0.65
AL031635-8|CAA21041.2| 1088|Caenorhabditis elegans Hypothetical ... 31 0.65
AC006780-7|AAF60648.1| 394|Caenorhabditis elegans Hypothetical ... 28 4.6
AC006780-6|AAF60647.1| 401|Caenorhabditis elegans Hypothetical ... 28 4.6
Z70311-4|CAA94373.1| 541|Caenorhabditis elegans Hypothetical pr... 27 6.0
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 27 6.0
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 27 6.0
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 27 6.0
AL034365-3|CAA22261.1| 563|Caenorhabditis elegans Hypothetical ... 27 6.0
>Z54237-10|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical
protein T11B7.4e protein.
Length = 684
Score = 44.8 bits (101), Expect = 4e-05
Identities = 27/84 (32%), Positives = 42/84 (50%)
Frame = +2
Query: 8 PPHKR*TNDLEMATGPKIVHKQFNSPIGLYSQQNIKETLNKHLKNLDNGSVGIDFNNPTT 187
PP + L T ++ H Q+NSP+G+YS ++ E + + L + S G
Sbjct: 121 PPQGFNNSALPFETDQRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDNS-GARAAAQRQ 179
Query: 188 DKPANLANSAVLRMLEEEERNRKG 259
D+PA L S LR+L+E+E G
Sbjct: 180 DEPAYL-RSETLRLLKEQEHGSAG 202
>Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 44.8 bits (101), Expect = 4e-05
Identities = 27/84 (32%), Positives = 42/84 (50%)
Frame = +2
Query: 8 PPHKR*TNDLEMATGPKIVHKQFNSPIGLYSQQNIKETLNKHLKNLDNGSVGIDFNNPTT 187
PP + L T ++ H Q+NSP+G+YS ++ E + + L + S G
Sbjct: 121 PPQGFNNSALPFETDQRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDNS-GARAAAQRQ 179
Query: 188 DKPANLANSAVLRMLEEEERNRKG 259
D+PA L S LR+L+E+E G
Sbjct: 180 DEPAYL-RSETLRLLKEQEHGSAG 202
>Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical
protein T11B7.4c protein.
Length = 771
Score = 44.8 bits (101), Expect = 4e-05
Identities = 27/84 (32%), Positives = 42/84 (50%)
Frame = +2
Query: 8 PPHKR*TNDLEMATGPKIVHKQFNSPIGLYSQQNIKETLNKHLKNLDNGSVGIDFNNPTT 187
PP + L T ++ H Q+NSP+G+YS ++ E + + L + S G
Sbjct: 50 PPQGFNNSALPFETDQRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDNS-GARAAAQRQ 108
Query: 188 DKPANLANSAVLRMLEEEERNRKG 259
D+PA L S LR+L+E+E G
Sbjct: 109 DEPAYL-RSETLRLLKEQEHGSAG 131
>Z54237-7|CAB54312.2| 645|Caenorhabditis elegans Hypothetical
protein T11B7.4b protein.
Length = 645
Score = 44.8 bits (101), Expect = 4e-05
Identities = 27/84 (32%), Positives = 42/84 (50%)
Frame = +2
Query: 8 PPHKR*TNDLEMATGPKIVHKQFNSPIGLYSQQNIKETLNKHLKNLDNGSVGIDFNNPTT 187
PP + L T ++ H Q+NSP+G+YS ++ E + + L + S G
Sbjct: 121 PPQGFNNSALPFETDQRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDNS-GARAAAQRQ 179
Query: 188 DKPANLANSAVLRMLEEEERNRKG 259
D+PA L S LR+L+E+E G
Sbjct: 180 DEPAYL-RSETLRLLKEQEHGSAG 202
>Z54237-6|CAE52903.1| 425|Caenorhabditis elegans Hypothetical
protein T11B7.4a protein.
Length = 425
Score = 44.8 bits (101), Expect = 4e-05
Identities = 27/84 (32%), Positives = 42/84 (50%)
Frame = +2
Query: 8 PPHKR*TNDLEMATGPKIVHKQFNSPIGLYSQQNIKETLNKHLKNLDNGSVGIDFNNPTT 187
PP + L T ++ H Q+NSP+G+YS ++ E + + L + S G
Sbjct: 121 PPQGFNNSALPFETDQRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDNS-GARAAAQRQ 179
Query: 188 DKPANLANSAVLRMLEEEERNRKG 259
D+PA L S LR+L+E+E G
Sbjct: 180 DEPAYL-RSETLRLLKEQEHGSAG 202
>Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical
protein T11B7.4e protein.
Length = 684
Score = 44.8 bits (101), Expect = 4e-05
Identities = 27/84 (32%), Positives = 42/84 (50%)
Frame = +2
Query: 8 PPHKR*TNDLEMATGPKIVHKQFNSPIGLYSQQNIKETLNKHLKNLDNGSVGIDFNNPTT 187
PP + L T ++ H Q+NSP+G+YS ++ E + + L + S G
Sbjct: 121 PPQGFNNSALPFETDQRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDNS-GARAAAQRQ 179
Query: 188 DKPANLANSAVLRMLEEEERNRKG 259
D+PA L S LR+L+E+E G
Sbjct: 180 DEPAYL-RSETLRLLKEQEHGSAG 202
>Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 44.8 bits (101), Expect = 4e-05
Identities = 27/84 (32%), Positives = 42/84 (50%)
Frame = +2
Query: 8 PPHKR*TNDLEMATGPKIVHKQFNSPIGLYSQQNIKETLNKHLKNLDNGSVGIDFNNPTT 187
PP + L T ++ H Q+NSP+G+YS ++ E + + L + S G
Sbjct: 121 PPQGFNNSALPFETDQRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDNS-GARAAAQRQ 179
Query: 188 DKPANLANSAVLRMLEEEERNRKG 259
D+PA L S LR+L+E+E G
Sbjct: 180 DEPAYL-RSETLRLLKEQEHGSAG 202
>Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical
protein T11B7.4c protein.
Length = 771
Score = 44.8 bits (101), Expect = 4e-05
Identities = 27/84 (32%), Positives = 42/84 (50%)
Frame = +2
Query: 8 PPHKR*TNDLEMATGPKIVHKQFNSPIGLYSQQNIKETLNKHLKNLDNGSVGIDFNNPTT 187
PP + L T ++ H Q+NSP+G+YS ++ E + + L + S G
Sbjct: 50 PPQGFNNSALPFETDQRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDNS-GARAAAQRQ 108
Query: 188 DKPANLANSAVLRMLEEEERNRKG 259
D+PA L S LR+L+E+E G
Sbjct: 109 DEPAYL-RSETLRLLKEQEHGSAG 131
>Z54235-9|CAB54190.2| 645|Caenorhabditis elegans Hypothetical
protein T11B7.4b protein.
Length = 645
Score = 44.8 bits (101), Expect = 4e-05
Identities = 27/84 (32%), Positives = 42/84 (50%)
Frame = +2
Query: 8 PPHKR*TNDLEMATGPKIVHKQFNSPIGLYSQQNIKETLNKHLKNLDNGSVGIDFNNPTT 187
PP + L T ++ H Q+NSP+G+YS ++ E + + L + S G
Sbjct: 121 PPQGFNNSALPFETDQRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDNS-GARAAAQRQ 179
Query: 188 DKPANLANSAVLRMLEEEERNRKG 259
D+PA L S LR+L+E+E G
Sbjct: 180 DEPAYL-RSETLRLLKEQEHGSAG 202
>Z54235-8|CAE52906.1| 425|Caenorhabditis elegans Hypothetical
protein T11B7.4a protein.
Length = 425
Score = 44.8 bits (101), Expect = 4e-05
Identities = 27/84 (32%), Positives = 42/84 (50%)
Frame = +2
Query: 8 PPHKR*TNDLEMATGPKIVHKQFNSPIGLYSQQNIKETLNKHLKNLDNGSVGIDFNNPTT 187
PP + L T ++ H Q+NSP+G+YS ++ E + + L + S G
Sbjct: 121 PPQGFNNSALPFETDQRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDNS-GARAAAQRQ 179
Query: 188 DKPANLANSAVLRMLEEEERNRKG 259
D+PA L S LR+L+E+E G
Sbjct: 180 DEPAYL-RSETLRLLKEQEHGSAG 202
>U97593-6|AAB52879.2| 925|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform c protein.
Length = 925
Score = 39.5 bits (88), Expect = 0.001
Identities = 23/69 (33%), Positives = 36/69 (52%)
Frame = +2
Query: 53 PKIVHKQFNSPIGLYSQQNIKETLNKHLKNLDNGSVGIDFNNPTTDKPANLANSAVLRML 232
P+ VH Q+NSP+GLYS++ E + + N + P +K + + SA L+ L
Sbjct: 2 PQTVHLQYNSPMGLYSKEAAVEQFQQQIGETPN-------DLPAQEKHFDPSKSATLKYL 54
Query: 233 EEEERNRKG 259
+E ER G
Sbjct: 55 KEGERENFG 63
>U97593-5|AAB52880.1| 1175|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform a protein.
Length = 1175
Score = 39.5 bits (88), Expect = 0.001
Identities = 23/69 (33%), Positives = 36/69 (52%)
Frame = +2
Query: 53 PKIVHKQFNSPIGLYSQQNIKETLNKHLKNLDNGSVGIDFNNPTTDKPANLANSAVLRML 232
P+ VH Q+NSP+GLYS++ E + + N + P +K + + SA L+ L
Sbjct: 121 PQTVHLQYNSPMGLYSKEAAVEQFQQQIGETPN-------DLPAQEKHFDPSKSATLKYL 173
Query: 233 EEEERNRKG 259
+E ER G
Sbjct: 174 KEGERENFG 182
>Z48717-10|CAA88612.2| 423|Caenorhabditis elegans Hypothetical
protein ZK1321.4 protein.
Length = 423
Score = 37.1 bits (82), Expect = 0.007
Identities = 24/72 (33%), Positives = 35/72 (48%)
Frame = +2
Query: 38 EMATGPKIVHKQFNSPIGLYSQQNIKETLNKHLKNLDNGSVGIDFNNPTTDKPANLANSA 217
E++ G + H Q+NSP+ LYS + E L + + G V P PA L S
Sbjct: 334 ELSPGAAVHHLQYNSPMNLYSSEATAEQLYQQTGAVPEGPV------PHDKSPAYL-TSE 386
Query: 218 VLRMLEEEERNR 253
+++EEE R R
Sbjct: 387 TRKLIEEEARGR 398
>Z48584-9|CAA88478.2| 423|Caenorhabditis elegans Hypothetical
protein ZK1321.4 protein.
Length = 423
Score = 37.1 bits (82), Expect = 0.007
Identities = 24/72 (33%), Positives = 35/72 (48%)
Frame = +2
Query: 38 EMATGPKIVHKQFNSPIGLYSQQNIKETLNKHLKNLDNGSVGIDFNNPTTDKPANLANSA 217
E++ G + H Q+NSP+ LYS + E L + + G V P PA L S
Sbjct: 334 ELSPGAAVHHLQYNSPMNLYSSEATAEQLYQQTGAVPEGPV------PHDKSPAYL-TSE 386
Query: 218 VLRMLEEEERNR 253
+++EEE R R
Sbjct: 387 TRKLIEEEARGR 398
>AL031635-9|CAH04762.1| 1136|Caenorhabditis elegans Hypothetical
protein Y47D3B.5b protein.
Length = 1136
Score = 30.7 bits (66), Expect = 0.65
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = +2
Query: 179 PTTDKPANLANSAVLRMLEEEERNRKGYSQKKVVWPPVPETNGYHNPQQQSPVYDN 346
PT ++A S V+ + E+ + ++K + + P+P N H + Q+P+ N
Sbjct: 718 PTVPTRNSIATSPVVSLCEDLKASKKSKKSRSISSSPIP-PNSLHEEETQTPLRQN 772
>AL031635-8|CAA21041.2| 1088|Caenorhabditis elegans Hypothetical
protein Y47D3B.5a protein.
Length = 1088
Score = 30.7 bits (66), Expect = 0.65
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = +2
Query: 179 PTTDKPANLANSAVLRMLEEEERNRKGYSQKKVVWPPVPETNGYHNPQQQSPVYDN 346
PT ++A S V+ + E+ + ++K + + P+P N H + Q+P+ N
Sbjct: 718 PTVPTRNSIATSPVVSLCEDLKASKKSKKSRSISSSPIP-PNSLHEEETQTPLRQN 772
>AC006780-7|AAF60648.1| 394|Caenorhabditis elegans Hypothetical
protein Y47D9A.1b protein.
Length = 394
Score = 27.9 bits (59), Expect = 4.6
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = -1
Query: 213 ELAKLAGLSVVGLLKSIPTDPLSRFF-RC--LLSVSLIFCCEYNPMG 82
+L +L+GLS + LL P+D + F RC VS+ + E NP+G
Sbjct: 37 QLCQLSGLSEILLLGFFPSDVFTDFISRCQQTYRVSIKYLEEPNPLG 83
>AC006780-6|AAF60647.1| 401|Caenorhabditis elegans Hypothetical
protein Y47D9A.1a protein.
Length = 401
Score = 27.9 bits (59), Expect = 4.6
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = -1
Query: 213 ELAKLAGLSVVGLLKSIPTDPLSRFF-RC--LLSVSLIFCCEYNPMG 82
+L +L+GLS + LL P+D + F RC VS+ + E NP+G
Sbjct: 44 QLCQLSGLSEILLLGFFPSDVFTDFISRCQQTYRVSIKYLEEPNPLG 90
>Z70311-4|CAA94373.1| 541|Caenorhabditis elegans Hypothetical
protein T25B9.5 protein.
Length = 541
Score = 27.5 bits (58), Expect = 6.0
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 16 QALNERPRDGHRPEDSTQAV 75
+ALN+ P+DG +PE+S V
Sbjct: 437 EALNKGPQDGRKPENSAMTV 456
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +1
Query: 1 TNPAAQALNERPRDGHRPEDSTQAVQLAHRVVLATEYQGNAQQTPEKP 144
T+ + Q E P+ G + + S + A V + + AQ+ EKP
Sbjct: 9236 TSKSKQTTEEHPQPGGKSDSSISSTSDASEVKQVQQSESEAQKVTEKP 9283
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +1
Query: 1 TNPAAQALNERPRDGHRPEDSTQAVQLAHRVVLATEYQGNAQQTPEKP 144
T+ + Q E P+ G + + S + A V + + AQ+ EKP
Sbjct: 9256 TSKSKQTTEEHPQPGGKSDSSISSTSDASEVKQVQQSESEAQKVTEKP 9303
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +1
Query: 1 TNPAAQALNERPRDGHRPEDSTQAVQLAHRVVLATEYQGNAQQTPEKP 144
T+ + Q E P+ G + + S + A V + + AQ+ EKP
Sbjct: 9256 TSKSKQTTEEHPQPGGKSDSSISSTSDASEVKQVQQSESEAQKVTEKP 9303
>AL034365-3|CAA22261.1| 563|Caenorhabditis elegans Hypothetical
protein Y69E1A.3 protein.
Length = 563
Score = 27.5 bits (58), Expect = 6.0
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 16 QALNERPRDGHRPEDSTQAV 75
+ALN+ P+DG +PE+S V
Sbjct: 459 EALNKGPQDGRKPENSAMTV 478
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,377,994
Number of Sequences: 27780
Number of extensions: 184039
Number of successful extensions: 785
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 785
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -