Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32447
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   5.7  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   5.7  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   7.5  
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    21   10.0 

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -2

Query: 359 SVARCCRTRDSAVVDYDIRSFRVLEATPLS 270
           S+    + RDS V   D    R+ E +PLS
Sbjct: 585 SLGNYYKIRDSKVKTLDASHNRITELSPLS 614


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -2

Query: 398 IEVAFDREAEQTGSVARCCRTRDSAVVDYDI 306
           IE   DR   + GS+ARC     +A  D DI
Sbjct: 201 IETDSDR---RKGSIARCWSLDSTAASDEDI 228


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 14/64 (21%), Positives = 24/64 (37%)
 Frame = +2

Query: 65  HKQFNSPIGLYSQQNIKETLNKHLKNLDNGSVGIDFNNPTTDKPANLANSAVLRMLEEEE 244
           + +FN  I  Y   +        + +L+N S   DF        AN+ N +V   +    
Sbjct: 294 YTEFNLTIKYYKSGSTVPFNFMFIADLNNQSTASDFKQLIDRWVANVPNGSVTNWVSGNH 353

Query: 245 RNRK 256
            N +
Sbjct: 354 DNHR 357


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -2

Query: 308 IRSFRVLEATPLSSDCILCG 249
           ++SF++L   PL+ D +  G
Sbjct: 59  LKSFKILPIEPLAVDSVKIG 78


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,230
Number of Sequences: 438
Number of extensions: 2319
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)