Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32435
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46381-4|CAA86519.2|  604|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p...    28   4.6  
Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical pr...    28   4.6  
Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical pr...    28   4.6  
AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.      28   4.6  
Z79754-10|CAB02099.1|  181|Caenorhabditis elegans Hypothetical p...    27   6.0  
Z75554-11|CAA99961.1|  301|Caenorhabditis elegans Hypothetical p...    27   8.0  

>Z46381-4|CAA86519.2|  604|Caenorhabditis elegans Hypothetical
           protein M01F1.5 protein.
          Length = 604

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 14/51 (27%), Positives = 25/51 (49%)
 Frame = -2

Query: 179 SIQLNWIASLLLTITRK*SASVSLKYGIYFCYRSDK*CNVKKYIVIHIFLF 27
           S   NWI +L++++T    +  + KYG +F Y     C      ++ +F F
Sbjct: 510 STACNWIFNLIVSLTFLSLSQAATKYGTFFIY-----CGCTMVALVFVFFF 555


>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
            protein C47D12.1c protein.
          Length = 4053

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 12/46 (26%), Positives = 26/46 (56%)
 Frame = +1

Query: 142  VNNNDAIQFNCIEEINILXLYYKKFI*LASLQYKHDFICKLNSVIT 279
            ++ ND ++F C+ E+N   L  K  + LA+   K+    K++ +++
Sbjct: 1527 ISYNDIMKFKCLVELNPKILVTKMAVNLANQMVKYKMSDKISRILS 1572


>Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical protein
            C47D12.1b protein.
          Length = 4061

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 12/46 (26%), Positives = 26/46 (56%)
 Frame = +1

Query: 142  VNNNDAIQFNCIEEINILXLYYKKFI*LASLQYKHDFICKLNSVIT 279
            ++ ND ++F C+ E+N   L  K  + LA+   K+    K++ +++
Sbjct: 1533 ISYNDIMKFKCLVELNPKILVTKMAVNLANQMVKYKMSDKISRILS 1578


>Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical protein
            C47D12.1a protein.
          Length = 4064

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 12/46 (26%), Positives = 26/46 (56%)
 Frame = +1

Query: 142  VNNNDAIQFNCIEEINILXLYYKKFI*LASLQYKHDFICKLNSVIT 279
            ++ ND ++F C+ E+N   L  K  + LA+   K+    K++ +++
Sbjct: 1533 ISYNDIMKFKCLVELNPKILVTKMAVNLANQMVKYKMSDKISRILS 1578


>AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.
          Length = 4064

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 12/46 (26%), Positives = 26/46 (56%)
 Frame = +1

Query: 142  VNNNDAIQFNCIEEINILXLYYKKFI*LASLQYKHDFICKLNSVIT 279
            ++ ND ++F C+ E+N   L  K  + LA+   K+    K++ +++
Sbjct: 1533 ISYNDIMKFKCLVELNPKILVTKMAVNLANQMVKYKMSDKISRILS 1578


>Z79754-10|CAB02099.1|  181|Caenorhabditis elegans Hypothetical
           protein F25H2.11 protein.
          Length = 181

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +1

Query: 139 IVNNNDAIQFNCIEEINILXLYYKKFI 219
           IV N+  ++ NC E+ ++   Y KKF+
Sbjct: 70  IVLNHKLVEMNCYEDASMFKAYIKKFM 96


>Z75554-11|CAA99961.1|  301|Caenorhabditis elegans Hypothetical
           protein ZC455.8a protein.
          Length = 301

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 10/27 (37%), Positives = 19/27 (70%)
 Frame = +2

Query: 233 CSINMILFVNLIQLSPLLSVNNIITKS 313
           C  ++ILFV L+ L   +++NN ++K+
Sbjct: 187 CMSSLILFVKLLSLKKAMNLNNDLSKT 213


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,750,897
Number of Sequences: 27780
Number of extensions: 172127
Number of successful extensions: 289
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 289
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)