Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32434
(516 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0110 + 819022-819264,819996-820761,820846-820920,821276-82... 30 0.96
03_02_0219 - 6527267-6527437,6528501-6528671,6528776-6529459 29 2.2
08_02_1329 - 26182762-26183007,26183149-26183249,26183533-261836... 29 2.9
11_06_0255 + 21723913-21725304 28 5.1
07_03_0571 - 19602755-19603831 28 5.1
12_01_0027 - 225670-225870,225989-226126,226315-226392,226523-22... 27 6.8
11_01_0027 - 199196-199396,199514-199651,200207-200284,200419-20... 27 6.8
10_05_0003 - 7715935-7716336,7716360-7716890 27 6.8
07_03_1782 + 29477748-29478169,29478257-29478413,29478518-294786... 27 6.8
07_03_1723 - 29038701-29039213,29039341-29039413,29039504-290395... 27 6.8
03_02_0639 - 10047105-10047204,10047315-10047495,10049375-100494... 27 6.8
09_02_0252 - 6315834-6315959,6316074-6317018 27 8.9
07_01_0362 - 2667031-2667090,2667182-2667426,2667749-2669471,266... 27 8.9
07_01_0358 - 2631214-2632992 27 8.9
06_03_1490 + 30497980-30498102,30499034-30500156,30500914-305011... 27 8.9
>02_01_0110 +
819022-819264,819996-820761,820846-820920,821276-821445,
821644-821742,821835-822134,822211-822318,822443-822514,
822580-822666,822887-822958,823063-823152,823795-823902,
824015-824083,824177-824242,824395-824418
Length = 782
Score = 30.3 bits (65), Expect = 0.96
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 354 WPEADWATECVSRAEILRLIYQGRFLHS 437
WPE D E + E +R +Y+GRFL S
Sbjct: 695 WPEVDALMEEMKNIEEVRDVYKGRFLRS 722
>03_02_0219 - 6527267-6527437,6528501-6528671,6528776-6529459
Length = 341
Score = 29.1 bits (62), Expect = 2.2
Identities = 23/63 (36%), Positives = 29/63 (46%)
Frame = +1
Query: 280 PERRKSSSSVPSTRPATSHCTSTIIGPKLTGQRNACLAPRSCD*STRVASCTAQ*LWALS 459
PE+R V +PA S C S IIG G R PR+ + +SC A L +
Sbjct: 80 PEKRPRYQDVDEEQPAASEC-SEIIG----GAR-----PRAAEVEVSESSCLASVLESYL 129
Query: 460 ACP 468
ACP
Sbjct: 130 ACP 132
>08_02_1329 -
26182762-26183007,26183149-26183249,26183533-26183602,
26183692-26183895,26186435-26186941,26188672-26188677
Length = 377
Score = 28.7 bits (61), Expect = 2.9
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +2
Query: 377 GMRVSRRDPATDLPGSLPAQLSDSGRSR--PAPRAHHGHAPSAARAPP 514
G + DP D P + + ++ SR P P +HH APS A PP
Sbjct: 41 GKMFNPNDPV-DNPEAFSSSIAAPSPSRAPPPPPSHHERAPSDAPPPP 87
>11_06_0255 + 21723913-21725304
Length = 463
Score = 27.9 bits (59), Expect = 5.1
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +3
Query: 312 VDSAGDI-ALHVYDNWPEADWATECVS 389
+ S GD+ +LH + NWP W T +S
Sbjct: 437 LQSLGDVESLHAWRNWPSPIWITPSLS 463
>07_03_0571 - 19602755-19603831
Length = 358
Score = 27.9 bits (59), Expect = 5.1
Identities = 13/19 (68%), Positives = 15/19 (78%), Gaps = 1/19 (5%)
Frame = -2
Query: 335 CDVAGR-VDGTEDELFRLS 282
CD+ G VD TEDELFRL+
Sbjct: 234 CDINGVCVDATEDELFRLT 252
>12_01_0027 -
225670-225870,225989-226126,226315-226392,226523-226708,
226853-226945,227797-227863,228660-228964
Length = 355
Score = 27.5 bits (58), Expect = 6.8
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 143 LTVAVRSFLWINRVQHDVGS 202
LT R + WIN + HD+G+
Sbjct: 252 LTTVDRDYGWINNIHHDIGT 271
>11_01_0027 -
199196-199396,199514-199651,200207-200284,200419-200604,
200754-200846,201665-201731,202374-202675
Length = 354
Score = 27.5 bits (58), Expect = 6.8
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 143 LTVAVRSFLWINRVQHDVGS 202
LT R + WIN + HD+G+
Sbjct: 251 LTTVDRDYGWINNIHHDIGT 270
>10_05_0003 - 7715935-7716336,7716360-7716890
Length = 310
Score = 27.5 bits (58), Expect = 6.8
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 286 RRKSSSSVPSTRPATSHCTSTIIGPKLTGQ 375
RR SSS+V +T+P S +GP L G+
Sbjct: 112 RRLSSSAVAATQPMMVRTLSQTLGPALPGR 141
>07_03_1782 +
29477748-29478169,29478257-29478413,29478518-29478610,
29478753-29478938,29479107-29479187,29479788-29479925,
29480044-29480208
Length = 413
Score = 27.5 bits (58), Expect = 6.8
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 143 LTVAVRSFLWINRVQHDVGS 202
LT R + WIN + HD+G+
Sbjct: 322 LTTVDRDYGWINNIHHDIGT 341
>07_03_1723 -
29038701-29039213,29039341-29039413,29039504-29039594,
29039684-29039741,29039829-29039905,29040004-29040214,
29040339-29040386,29042496-29042608,29043270-29043341,
29044372-29046336,29046434-29046641,29046847-29047165,
29047813-29047937,29048024-29048157,29049089-29049164,
29049276-29049428,29049829-29050532,29050636-29050811,
29050945-29051107,29051199-29051341,29051802-29051914,
29053113-29053237,29053867-29054016,29054753-29054921,
29055201-29055418,29055499-29055709
Length = 2135
Score = 27.5 bits (58), Expect = 6.8
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -2
Query: 356 PIIVDVQCDVAGRVDGTEDELFRLSGN 276
P +D+ +V G DGT D +FRL+G+
Sbjct: 4 PRELDLSDEVEGEEDGTTDFVFRLAGD 30
>03_02_0639 -
10047105-10047204,10047315-10047495,10049375-10049464,
10050718-10050796,10050887-10051024,10051897-10051977,
10052079-10052264,10052366-10052458,10052537-10052603,
10052709-10052798,10052909-10053441
Length = 545
Score = 27.5 bits (58), Expect = 6.8
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 143 LTVAVRSFLWINRVQHDVGS 202
LT R + WIN V HD+G+
Sbjct: 359 LTTLDRDYGWINNVHHDIGT 378
>09_02_0252 - 6315834-6315959,6316074-6317018
Length = 356
Score = 27.1 bits (57), Expect = 8.9
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +2
Query: 386 VSRRDPATDLPGSLPA--QLSDSGRSRPAPRAHHGHA 490
VS R ++ PG +P+ +LS S P+PRAH A
Sbjct: 32 VSSRYLSSTTPGPVPSSPRLSTSSSRTPSPRAHRPRA 68
>07_01_0362 -
2667031-2667090,2667182-2667426,2667749-2669471,
2669578-2669921,2670544-2670667,2671350-2671599,
2672486-2672571
Length = 943
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = -1
Query: 480 WCALGAGRERPESLSCAGSDPGRSVAGSRRETRIPLPSQLRANY 349
W A G RE E AG+D G+S++ ++ + + + L + +
Sbjct: 398 WVAEGTERENVEGRGEAGTDEGKSLSNAQVDLNLTMAGGLPSTH 441
>07_01_0358 - 2631214-2632992
Length = 592
Score = 27.1 bits (57), Expect = 8.9
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 298 SSSVPSTRPATSHCTSTI 351
S ++PSTRPA HC + +
Sbjct: 2 SEAIPSTRPALRHCVALL 19
>06_03_1490 +
30497980-30498102,30499034-30500156,30500914-30501132,
30501228-30501454,30501810-30501884,30502250-30502321,
30502765-30502863,30502975-30503046,30503131-30503245,
30503455-30503523,30503625-30503952,30504320-30504437,
30504522-30505448
Length = 1188
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +2
Query: 428 PAQLSDSG-RSRPAPRAHHGHAPSAARAPP 514
PA +G SR P HHG PS+ + PP
Sbjct: 482 PAPHPSAGFTSRAMPGQHHGMPPSSMKPPP 511
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,345,578
Number of Sequences: 37544
Number of extensions: 301876
Number of successful extensions: 1126
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1086
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1125
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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