Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32434
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81449-7|CAE17762.1|  121|Caenorhabditis elegans Hypothetical pr...   107   6e-24
Z81548-4|CAB04465.1|  916|Caenorhabditis elegans Hypothetical pr...    31   0.65 
Z81503-5|CAB04114.1|  916|Caenorhabditis elegans Hypothetical pr...    31   0.65 
Z74472-5|CAA98943.1|  802|Caenorhabditis elegans Hypothetical pr...    31   0.65 
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p...    29   2.6  
Z81098-6|CAB03180.3|  610|Caenorhabditis elegans Hypothetical pr...    28   3.4  
AF067608-6|AAC17648.2|  194|Caenorhabditis elegans Hypothetical ...    28   3.4  
U53333-11|AAA96164.1|  104|Caenorhabditis elegans Hypothetical p...    27   8.0  

>Z81449-7|CAE17762.1|  121|Caenorhabditis elegans Hypothetical
           protein C46F11.6 protein.
          Length = 121

 Score =  107 bits (256), Expect = 6e-24
 Identities = 56/100 (56%), Positives = 71/100 (71%), Gaps = 3/100 (3%)
 Frame = +3

Query: 225 MSAK---NIPGDKINLRLILVSGKTKEFVFSPVDSAGDIALHVYDNWPEADWATECVSRA 395
           MSAK   +   +++ LRLILVSGKT EF F P+ SA D+   V+D WP+ +W  + V  A
Sbjct: 1   MSAKQSIDSQAERVVLRLILVSGKTHEFEFHPLTSAHDVTQMVFDQWPD-EWYEDKVQSA 59

Query: 396 EILRLIYQGRFLHSSVTLGALGLPLGRTTVMHLVPREHLP 515
           ++L+LIY GRFLH SVTL AL L  G+TTVMHLV RE+LP
Sbjct: 60  QMLKLIYHGRFLHGSVTLHALQLMPGKTTVMHLVTRENLP 99


>Z81548-4|CAB04465.1|  916|Caenorhabditis elegans Hypothetical
           protein F14F7.5 protein.
          Length = 916

 Score = 30.7 bits (66), Expect = 0.65
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = +2

Query: 401 PATDLPGSLPAQLSDSGRSRPAPRAHHGHAPSAARAP 511
           PAT L    P+  S   + +P PR     APSA  AP
Sbjct: 782 PATPLSSPAPSNQSPPSQPQPGPRGSSPPAPSAPSAP 818


>Z81503-5|CAB04114.1|  916|Caenorhabditis elegans Hypothetical
           protein F14F7.5 protein.
          Length = 916

 Score = 30.7 bits (66), Expect = 0.65
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = +2

Query: 401 PATDLPGSLPAQLSDSGRSRPAPRAHHGHAPSAARAP 511
           PAT L    P+  S   + +P PR     APSA  AP
Sbjct: 782 PATPLSSPAPSNQSPPSQPQPGPRGSSPPAPSAPSAP 818


>Z74472-5|CAA98943.1|  802|Caenorhabditis elegans Hypothetical
           protein F23H12.5 protein.
          Length = 802

 Score = 30.7 bits (66), Expect = 0.65
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = +1

Query: 223 QCRQKIYPEIRSTYD*SWFPERRKSSSSVPSTRPATSHCTST 348
           Q  +  YP + ST++   +P+  +  +S PST  +T+  T+T
Sbjct: 178 QSPKPTYPSVPSTFEFEKYPKSTEEPTSTPSTSTSTTTTTTT 219


>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
            protein T19D12.1 protein.
          Length = 1844

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +1

Query: 280  PERRKSSSSVPSTRPATSHCTSTIIGPKLTG 372
            P+   SS+SVPS+  ATS  +ST +G    G
Sbjct: 1508 PQPTVSSTSVPSSTGATSSGSSTTVGSSTVG 1538


>Z81098-6|CAB03180.3|  610|Caenorhabditis elegans Hypothetical
           protein K07A12.4a protein.
          Length = 610

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 437 LSDSGRSRPAPRAHHGHAPSAARAPP 514
           L+DSGR+ PA  A H   PS++  PP
Sbjct: 52  LTDSGRNSPALPAPHPGIPSSSYHPP 77


>AF067608-6|AAC17648.2|  194|Caenorhabditis elegans Hypothetical
           protein B0511.9a protein.
          Length = 194

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = +1

Query: 322 PATSHCTSTIIGPKLTGQRNACLAP 396
           P+T  CT T I P LT  R    AP
Sbjct: 76  PSTGECTRTSIAPTLTSARTPVAAP 100


>U53333-11|AAA96164.1|  104|Caenorhabditis elegans Hypothetical
           protein F36A4.1 protein.
          Length = 104

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 16/53 (30%), Positives = 20/53 (37%), Gaps = 2/53 (3%)
 Frame = +3

Query: 165 FSG*IVCNTTSDHRKGS*YTMSAKNIPGDKINLRLILVSGKTK--EFVFSPVD 317
           F   I CN    H  G  Y +    I  DK+       S +TK  E+   P D
Sbjct: 21  FEADITCNIPGAHWCGEIYVLEKNLIKDDKLKHEKFCTSERTKSLEYTIDPTD 73


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,848,435
Number of Sequences: 27780
Number of extensions: 248574
Number of successful extensions: 865
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 864
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)