Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32427
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79755-1|CAB02111.2| 358|Caenorhabditis elegans Hypothetical pr... 265 1e-71
Z81046-1|CAB02822.1| 379|Caenorhabditis elegans Hypothetical pr... 169 1e-42
Z46242-1|CAA86325.2| 396|Caenorhabditis elegans Hypothetical pr... 168 2e-42
AC006610-5|AAK85453.1| 373|Caenorhabditis elegans Hypothetical ... 166 9e-42
Z81479-7|CAB03943.1| 435|Caenorhabditis elegans Hypothetical pr... 31 0.49
Z68343-3|CAA92778.1| 412|Caenorhabditis elegans Hypothetical pr... 31 0.49
U61944-3|AAB03119.1| 818|Caenorhabditis elegans Hypothetical pr... 29 1.5
U97408-2|AAB93342.1| 230|Caenorhabditis elegans Hypothetical pr... 29 2.6
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc... 28 4.6
AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase assoc... 28 4.6
Z68315-7|CAA92672.1| 735|Caenorhabditis elegans Hypothetical pr... 27 8.0
U23830-1|AAB01508.1| 730|Caenorhabditis elegans suf-1 protein. 27 8.0
L39893-1|AAA62311.1| 735|Caenorhabditis elegans cleavage stimul... 27 8.0
>Z79755-1|CAB02111.2| 358|Caenorhabditis elegans Hypothetical
protein F43G9.1 protein.
Length = 358
Score = 265 bits (649), Expect = 1e-71
Identities = 121/170 (71%), Positives = 143/170 (84%)
Frame = +2
Query: 5 RKKVTAVHKANIMRMSDGLFLRCCRELAXKYPDIKFEERYLDTVCLNMVQDPSKFDVLVM 184
RK VTAVHKANIMR SDGLFL CRE A YPDIKF+E YLDTVCLNMVQDPS++DVLVM
Sbjct: 185 RKVVTAVHKANIMRQSDGLFLSICREQAALYPDIKFKEAYLDTVCLNMVQDPSQYDVLVM 244
Query: 185 PNLYGDIMSDMCSGLVGGLGLTPSGNIGKNGALFESVHGTAPDIAGKDMANPTALLLSAI 364
PNLYGDI+SD+C+GLVGGLG+TPSGNIGK A+FESVHGTAPDIAG+D ANPTALLLSA+
Sbjct: 245 PNLYGDILSDLCAGLVGGLGVTPSGNIGKGAAVFESVHGTAPDIAGQDKANPTALLLSAV 304
Query: 365 MMLRHLQLNDHADLVQNACYEVLXEGRALTGDLGGTAKCSEFTNAIISKL 514
MMLR++ L HA ++ A ++ + +GRA TGDLGGT CS FT + +++
Sbjct: 305 MMLRYMNLPQHAARIEKAVFDAIADGRAKTGDLGGTGTCSSFTADVCARV 354
>Z81046-1|CAB02822.1| 379|Caenorhabditis elegans Hypothetical
protein C37E2.1 protein.
Length = 379
Score = 169 bits (411), Expect = 1e-42
Identities = 78/170 (45%), Positives = 115/170 (67%), Gaps = 1/170 (0%)
Frame = +2
Query: 5 RKKVTAVHKANIMRMSDGLFLRCCRELAXKYPDIKFEERYLDTVCLNMVQDPSKFDVLVM 184
RKKVTAVHKANIM++ DGLFLR C +A +YP I+FE +D C+ +V P +FDV+VM
Sbjct: 207 RKKVTAVHKANIMKLGDGLFLRTCEGVAKQYPKIQFESMIIDNTCMQLVSKPEQFDVMVM 266
Query: 185 PNLYGDIMSDMCSGLVGGLGLTPSGNIGKNGALFE-SVHGTAPDIAGKDMANPTALLLSA 361
PNLYG+I+ ++ +GLVGG G+ P ++G++ +FE + + G+ +ANPTA++L A
Sbjct: 267 PNLYGNIIDNLAAGLVGGAGVVPGQSVGRDFVIFEPGSRHSFQEAMGRSIANPTAMILCA 326
Query: 362 IMMLRHLQLNDHADLVQNACYEVLXEGRALTGDLGGTAKCSEFTNAIISK 511
ML HL L+ + ++ A +V+ EG+ T DLGG A +F +A+I K
Sbjct: 327 ANMLNHLHLDAWGNSLRQAVADVVKEGKVRTRDLGGYATTVDFADAVIDK 376
>Z46242-1|CAA86325.2| 396|Caenorhabditis elegans Hypothetical
protein F35G12.2 protein.
Length = 396
Score = 168 bits (408), Expect = 2e-42
Identities = 79/169 (46%), Positives = 116/169 (68%), Gaps = 2/169 (1%)
Frame = +2
Query: 5 RKKVTAVHKANIMRMSDGLFLRCCRELAX-KYPDIKFEERYLDTVCLNMVQDPSKFDVLV 181
RKKVTAVHKANI ++ DGLFL+ ++A +YPDI+F +D + +V P +FDV++
Sbjct: 214 RKKVTAVHKANIQKLGDGLFLKVATDIAKAEYPDIEFNAMIVDNASMQLVSRPQQFDVML 273
Query: 182 MPNLYGDIMSDMCSGLVGGLGLTPSGNIGKNGALFES-VHGTAPDIAGKDMANPTALLLS 358
MPNLYG+I+S++ GLVGG GL NIG++ A+FE+ T +AGKD+ANPTA + +
Sbjct: 274 MPNLYGNIISNIACGLVGGPGLVSGMNIGEDYAVFETGTRNTGTTLAGKDLANPTAFIRA 333
Query: 359 AIMMLRHLQLNDHADLVQNACYEVLXEGRALTGDLGGTAKCSEFTNAII 505
A+ MLR L L HAD++ ++ + L + R T D+GGT+K SE +++
Sbjct: 334 AVDMLRFLGLQSHADMISDSLFRTLVDKRIHTADIGGTSKSSELVQSVL 382
>AC006610-5|AAK85453.1| 373|Caenorhabditis elegans Hypothetical
protein C30F12.7 protein.
Length = 373
Score = 166 bits (403), Expect = 9e-42
Identities = 78/171 (45%), Positives = 114/171 (66%), Gaps = 1/171 (0%)
Frame = +2
Query: 5 RKKVTAVHKANIMRMSDGLFLRCCRELAXKYPDIKFEERYLDTVCLNMVQDPSKFDVLVM 184
RKKVTAVHKANI ++ DGLFL+ R+++ Y DIKFE +D + +V P +FDV+VM
Sbjct: 193 RKKVTAVHKANIQKLGDGLFLKVVRDMSEDYKDIKFEAMIVDNASMQLVSKPQQFDVMVM 252
Query: 185 PNLYGDIMSDMCSGLVGGLGLTPSGNIGKNGALFES-VHGTAPDIAGKDMANPTALLLSA 361
PNLYG+I+S++ GLVGG GL N+G A+FE+ T +AGKD+ANPTA + ++
Sbjct: 253 PNLYGNIISNIACGLVGGPGLVSGMNLGDKYAVFETGTRNTGTSLAGKDIANPTAFIRAS 312
Query: 362 IMMLRHLQLNDHADLVQNACYEVLXEGRALTGDLGGTAKCSEFTNAIISKL 514
+ MLR+L + HA+++ +A ++ L E R T D+GG S+ NA + +
Sbjct: 313 VDMLRYLGCHYHANIISDALWKALVEQRIHTADIGGNNSASDVINATLQNI 363
>Z81479-7|CAB03943.1| 435|Caenorhabditis elegans Hypothetical
protein C34F6.8 protein.
Length = 435
Score = 31.1 bits (67), Expect = 0.49
Identities = 40/155 (25%), Positives = 62/155 (40%), Gaps = 19/155 (12%)
Frame = +2
Query: 80 ELAXKYPDIKFEERYLDTVCLNMVQDPSKFDVLVMPNLYGDIMSDMCSGLVGGLGLTPSG 259
E K I +E R +D ++ F V N GD+ SD+ + G LGL S
Sbjct: 258 EADFKNNKIWYEHRLIDDQVAQALKSSGGF-VWACKNYDGDVQSDIVAQGYGSLGLMSSV 316
Query: 260 NIGKNGALF--ESVHGTAP------DIAGKDMANPTALLLSAIMMLRHLQLNDHAD---- 403
+ +G E+ HGT NP A + + L H + D+ +
Sbjct: 317 LMCPDGKTIEAEAAHGTVTRHYREHQKGNSTSTNPIASIFAWTRGLHHRGVLDNNEALKT 376
Query: 404 ---LVQNACYEVLXEGRALTGDLG----GTAKCSE 487
++ AC + + EG+ +T DL GT K +E
Sbjct: 377 FSLTLEKACIDTVEEGK-MTKDLSICIHGTKKGTE 410
>Z68343-3|CAA92778.1| 412|Caenorhabditis elegans Hypothetical
protein F59B8.2 protein.
Length = 412
Score = 31.1 bits (67), Expect = 0.49
Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 8/100 (8%)
Frame = +2
Query: 29 KANIMRMSDGLFLRCCRELAXKYP------DIKFEERYLDTVCLNMVQDPSKFDVLVMPN 190
K I++ DG F E+ +Y I +E R +D + ++ F V N
Sbjct: 212 KNTILKKYDGRFKDIFAEIYPEYEAEFKAAGIWYEHRLIDDMVAQAMKSDGGF-VWACKN 270
Query: 191 LYGDIMSDMCSGLVGGLGLTPSGNIGKNGALF--ESVHGT 304
GD+ SD + G LGL S + +G E+ HGT
Sbjct: 271 YDGDVQSDSVAQGYGSLGLMTSVLVCPDGKTVEAEAAHGT 310
>U61944-3|AAB03119.1| 818|Caenorhabditis elegans Hypothetical
protein T12E12.3 protein.
Length = 818
Score = 29.5 bits (63), Expect = 1.5
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = -1
Query: 300 PCTDSKSAPFLPMLPEGVRPSPPTSP-EHMSDMMSPYRLGITSTSNL 163
P SK P+ P P G R P+SP H+ ++ P + + S L
Sbjct: 274 PAPRSKILPWRPRTPAGHRDRSPSSPMAHLDNIQPPSPIQVVSNPTL 320
>U97408-2|AAB93342.1| 230|Caenorhabditis elegans Hypothetical
protein F48A9.2 protein.
Length = 230
Score = 28.7 bits (61), Expect = 2.6
Identities = 21/56 (37%), Positives = 29/56 (51%)
Frame = -1
Query: 240 SPPTSPEHMSDMMSPYRLGITSTSNLEGSCTMLRQTVSRYRSSNLMSGYLXASSRQ 73
SP TS S MSPY + + LE S M+R S +RSS L + ++SR+
Sbjct: 98 SPSTS---QSSWMSPY--SESPSRRLEDSLDMMRSNTSLHRSSPLPIQMVPSTSRE 148
>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase associated
protein homologprotein 1, isoform a protein.
Length = 1256
Score = 27.9 bits (59), Expect = 4.6
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -1
Query: 321 PAISGAVPCTDSKSAPFLPMLPEGVRPSPPTSPEHMSDMMSP 196
P S + P + SAP P P G P PP P ++P
Sbjct: 988 PDASASAPSAAAPSAPKAPAGPGGPPPPPPPPPADFFANIAP 1029
>AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase
associated protein homologprotein 1, isoform b protein.
Length = 495
Score = 27.9 bits (59), Expect = 4.6
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -1
Query: 321 PAISGAVPCTDSKSAPFLPMLPEGVRPSPPTSPEHMSDMMSP 196
P S + P + SAP P P G P PP P ++P
Sbjct: 227 PDASASAPSAAAPSAPKAPAGPGGPPPPPPPPPADFFANIAP 268
>Z68315-7|CAA92672.1| 735|Caenorhabditis elegans Hypothetical
protein F28C6.6 protein.
Length = 735
Score = 27.1 bits (57), Expect = 8.0
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = -1
Query: 321 PAISGAVPCTD--SKSAPFLPMLPEGVRPSPPTSPEHMSDMMSPYRLGITSTSNLEGSCT 148
P IS +P + +A F P+ P GV P PP S H+ ++ P I N+E C
Sbjct: 586 PDISQMIPFKPRVNCTASFHPV-PGGVFP-PPQSVAHLMSLLPPPTCFIGPFINVELLCN 643
Query: 147 ML 142
M+
Sbjct: 644 MI 645
>U23830-1|AAB01508.1| 730|Caenorhabditis elegans suf-1 protein.
Length = 730
Score = 27.1 bits (57), Expect = 8.0
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = -1
Query: 321 PAISGAVPCTD--SKSAPFLPMLPEGVRPSPPTSPEHMSDMMSPYRLGITSTSNLEGSCT 148
P IS +P + +A F P+ P GV P PP S H+ ++ P I N+E C
Sbjct: 581 PDISQMIPFKPRVNCTASFHPV-PGGVFP-PPQSVAHLMSLLPPPTCFIGPFINVELLCN 638
Query: 147 ML 142
M+
Sbjct: 639 MI 640
>L39893-1|AAA62311.1| 735|Caenorhabditis elegans cleavage
stimulation factor protein.
Length = 735
Score = 27.1 bits (57), Expect = 8.0
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = -1
Query: 321 PAISGAVPCTD--SKSAPFLPMLPEGVRPSPPTSPEHMSDMMSPYRLGITSTSNLEGSCT 148
P IS +P + +A F P+ P GV P PP S H+ ++ P I N+E C
Sbjct: 586 PDISQMIPFKPRVNCTASFHPV-PGGVFP-PPQSVAHLMSLLPPPTCFIGPFINVELLCN 643
Query: 147 ML 142
M+
Sbjct: 644 MI 645
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,414,001
Number of Sequences: 27780
Number of extensions: 197781
Number of successful extensions: 776
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 769
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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