Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32426
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024200-2|AAF35997.2| 189|Caenorhabditis elegans Hypothetical ... 144 3e-35
AF078783-6|AAC26923.1| 473|Caenorhabditis elegans Hypothetical ... 55 3e-08
U80836-7|AAB37893.3| 451|Caenorhabditis elegans Hypothetical pr... 54 8e-08
AL031620-4|CAA20925.1| 456|Caenorhabditis elegans Hypothetical ... 48 4e-06
AF101318-5|AAC69347.1| 574|Caenorhabditis elegans Hypothetical ... 46 1e-05
Z82062-2|CAB04890.1| 489|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z35595-4|CAA84635.1| 170|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AF047662-7|AAC04439.1| 955|Caenorhabditis elegans Hypothetical ... 46 2e-05
AF101318-6|AAC69348.2| 946|Caenorhabditis elegans Hypothetical ... 45 4e-05
AC024812-2|AAF59555.1| 304|Caenorhabditis elegans Hypothetical ... 42 3e-04
AL031635-7|CAB54384.2| 487|Caenorhabditis elegans Hypothetical ... 40 8e-04
Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical p... 40 0.001
AL110479-9|CAB60315.3| 583|Caenorhabditis elegans Hypothetical ... 40 0.001
AC024806-4|AAF59525.1| 192|Caenorhabditis elegans Hypothetical ... 37 0.010
AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical ... 36 0.013
Z81075-6|CAB03049.1| 564|Caenorhabditis elegans Hypothetical pr... 36 0.023
Z81070-13|CAB03009.1| 564|Caenorhabditis elegans Hypothetical p... 36 0.023
AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical... 36 0.023
AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical... 36 0.023
AC006607-7|AAL00855.1| 789|Caenorhabditis elegans Hypothetical ... 36 0.023
U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical pr... 35 0.030
Z11115-11|CAA77447.1| 161|Caenorhabditis elegans Hypothetical p... 34 0.052
U80449-2|AAB37826.1| 112|Caenorhabditis elegans Hypothetical pr... 32 0.28
AC006712-2|AAK39324.1| 754|Caenorhabditis elegans Hypothetical ... 31 0.37
Z70208-5|CAA94134.1| 201|Caenorhabditis elegans Hypothetical pr... 31 0.65
U58750-3|AAB00643.2| 350|Caenorhabditis elegans Hypothetical pr... 31 0.65
U89792-1|AAB94380.1| 339|Caenorhabditis elegans seven-in-absent... 30 0.85
AC024759-5|AAK68432.1| 419|Caenorhabditis elegans Hypothetical ... 30 0.85
Z70205-2|CAA94116.1| 529|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z36948-1|CAA85409.1| 180|Caenorhabditis elegans Hypothetical pr... 29 1.5
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr... 29 2.0
Z47075-3|CAA87383.2| 182|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z19156-2|CAE17940.2| 275|Caenorhabditis elegans Hypothetical pr... 28 4.6
AC006790-9|AAF60735.1| 382|Caenorhabditis elegans Hypothetical ... 28 4.6
U80446-2|AAB37803.1| 1562|Caenorhabditis elegans Nuclear pore co... 27 6.0
U67953-1|AAQ91892.1| 398|Caenorhabditis elegans Hypothetical pr... 27 8.0
AF016655-11|AAK31434.1| 162|Caenorhabditis elegans Hypothetical... 27 8.0
>AC024200-2|AAF35997.2| 189|Caenorhabditis elegans Hypothetical
protein Y71F9AL.10 protein.
Length = 189
Score = 144 bits (349), Expect = 3e-35
Identities = 59/85 (69%), Positives = 67/85 (78%)
Frame = +2
Query: 206 IKCPVCSKFVLPDDIECHLVMCLTRPRLSYNEDVLSDSKGECVICLEELSAGDTIARLPC 385
+KCPVC K V DD + HLVMCLTRP+++YN+DVL D KGEC ICLE+L AG IARLPC
Sbjct: 104 MKCPVCHKVVPSDDADIHLVMCLTRPKITYNDDVLKDDKGECSICLEDLEAGHKIARLPC 163
Query: 386 LCIYHKGCIDQWFEVNRSCPEHPGD 460
LCIYHK CID WF+ CPEHPGD
Sbjct: 164 LCIYHKQCIDDWFKRKNCCPEHPGD 188
>AF078783-6|AAC26923.1| 473|Caenorhabditis elegans Hypothetical
protein H10E21.5 protein.
Length = 473
Score = 55.2 bits (127), Expect = 3e-08
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +2
Query: 272 LTR-PRLSYNEDVLSDSKGECVICLEELSAGDTIARLPCLCIYHKGCIDQWFEVNRSCP 445
LTR P ++ + + + +C +CL+ D I LPC IYHK CID W +R+CP
Sbjct: 207 LTRIPTMTITPGMTQELQSDCAVCLDPYQLQDVIRLLPCKHIYHKSCIDPWLLEHRTCP 265
>U80836-7|AAB37893.3| 451|Caenorhabditis elegans Hypothetical
protein B0432.13 protein.
Length = 451
Score = 53.6 bits (123), Expect = 8e-08
Identities = 21/45 (46%), Positives = 25/45 (55%)
Frame = +2
Query: 311 SDSKGECVICLEELSAGDTIARLPCLCIYHKGCIDQWFEVNRSCP 445
S +G C IC E+L D I+ + C IYH GCI QW R CP
Sbjct: 7 SSLQGSCSICFEDLKQNDKISAIVCGHIYHHGCISQWIATKRQCP 51
>AL031620-4|CAA20925.1| 456|Caenorhabditis elegans Hypothetical
protein C18B12.4 protein.
Length = 456
Score = 48.0 bits (109), Expect = 4e-06
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 308 LSDSKGECVICLEELSAGDTIARLPCLCIYHKGCIDQWF-EVNRSCP 445
L D C ICLE ++G+ + LPC ++H CID W + + CP
Sbjct: 240 LGDDPDTCAICLESFASGEKLRHLPCRHVFHCNCIDVWLTQTRKICP 286
>AF101318-5|AAC69347.1| 574|Caenorhabditis elegans Hypothetical
protein Y73C8C.7 protein.
Length = 574
Score = 46.4 bits (105), Expect = 1e-05
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +2
Query: 326 ECVICLEELSAG-DTIARLPCLCIYHKGCIDQWFEVNRSCP 445
EC++CLE++ +T+ L C YH GC +WF+V R CP
Sbjct: 518 ECLVCLEDMKEEHETLKCLDCKRKYHTGCAQKWFKVKRICP 558
>Z82062-2|CAB04890.1| 489|Caenorhabditis elegans Hypothetical
protein W02A11.3 protein.
Length = 489
Score = 46.0 bits (104), Expect = 2e-05
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +2
Query: 314 DSKGECVICLEELSAGDTIARLPCLCIYHKGCIDQWFEVNRSCP 445
+ + C +CL G++I +L C ++H CI +W ++N+ CP
Sbjct: 428 EDEDTCTVCLSSFEDGESIQKLRCNHVFHPECIYKWLDINKRCP 471
>Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical
protein F55A11.3 protein.
Length = 610
Score = 46.0 bits (104), Expect = 2e-05
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +2
Query: 329 CVICLEELSAGDTIARLPCLCIYHKGCIDQWFEVNRSCP 445
C+IC EE++ + RLPC ++H C+ WF+ ++CP
Sbjct: 292 CIICREEMTVDASPKRLPCSHVFHAHCLRSWFQRQQTCP 330
>Z35595-4|CAA84635.1| 170|Caenorhabditis elegans Hypothetical
protein C01G6.4 protein.
Length = 170
Score = 46.0 bits (104), Expect = 2e-05
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +2
Query: 317 SKGECVICLEELSAGDTIARLPCLCIYHKGCIDQWFEVNRSCP 445
+ EC IC+ + G+ I LPC+ +H+ C+D+W + +CP
Sbjct: 91 TSNECAICMIDFEPGERIRFLPCMHSFHQECVDEWLMKSFTCP 133
>AF047662-7|AAC04439.1| 955|Caenorhabditis elegans Hypothetical
protein T22B2.1 protein.
Length = 955
Score = 46.0 bits (104), Expect = 2e-05
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +2
Query: 281 PRLSYNEDVLSDSKG--ECVICLEELSAG-DTIARLPCLCIYHKGCIDQWFEVNRSCP 445
P L E + SD EC++CLE++ DT+ C YH C+ +WF++ R CP
Sbjct: 882 PLLKLPETIKSDELDDKECLVCLEDMVKNQDTVKCSTCKRQYHTTCVQKWFKIKRICP 939
>AF101318-6|AAC69348.2| 946|Caenorhabditis elegans Hypothetical
protein Y73C8C.8 protein.
Length = 946
Score = 44.8 bits (101), Expect = 4e-05
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 290 SYNEDVLSDSKGECVICLEEL-SAGDTIARLPCLCIYHKGCIDQWFEVNRSCP 445
S D L D EC++CLE++ +T+ C YH GC +WF+V R CP
Sbjct: 880 SQKSDDLEDK--ECLVCLEDMMEEHETLKCSNCKRQYHTGCAQKWFKVKRICP 930
>AC024812-2|AAF59555.1| 304|Caenorhabditis elegans Hypothetical
protein Y54E10BR.3 protein.
Length = 304
Score = 41.5 bits (93), Expect = 3e-04
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +2
Query: 314 DSKGECVICLEELSAGDTIARLPCLCIYHKGCIDQWFEVNRSCP 445
D+ +C C + + + L C I+H+ CI+ W + SCP
Sbjct: 233 DNGAQCTTCFDTFKLDEDVGALDCNHIFHRPCIEPWLKTKNSCP 276
>AL031635-7|CAB54384.2| 487|Caenorhabditis elegans Hypothetical
protein Y47D3B.11 protein.
Length = 487
Score = 40.3 bits (90), Expect = 8e-04
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +2
Query: 329 CVICLEELSAGDTIARLPCLCIYHKGCIDQWFEVNRSCP 445
CVICLEE G + L C +H C+D W R CP
Sbjct: 317 CVICLEEYEEGTELRVLFCGHEFHPKCVDPWLLSKRRCP 355
>Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical protein
H05L14.2 protein.
Length = 2162
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +2
Query: 299 EDVLSDSKGECVICLEELS-AGDTIARLPCLCIYHKGCIDQWFEVNRSCPE 448
E+V+ + G C+IC E + A +T+ C YH CI +W ++N CP+
Sbjct: 2098 EEVVEEEDG-CLICTEIIEEAVETVTCDTCTREYHYHCISRWLKINSVCPQ 2147
>Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical
protein H05L14.2 protein.
Length = 2162
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +2
Query: 299 EDVLSDSKGECVICLEELS-AGDTIARLPCLCIYHKGCIDQWFEVNRSCPE 448
E+V+ + G C+IC E + A +T+ C YH CI +W ++N CP+
Sbjct: 2098 EEVVEEEDG-CLICTEIIEEAVETVTCDTCTREYHYHCISRWLKINSVCPQ 2147
>AL110479-9|CAB60315.3| 583|Caenorhabditis elegans Hypothetical
protein Y105C5B.11 protein.
Length = 583
Score = 39.5 bits (88), Expect = 0.001
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 296 NEDVLSDSKGECVICLEELSAGDTIARLP-CLCIYHKGCIDQWFEVNRSCPE 448
+ + + + EC+IC E++ + + P C IYH C QW +CP+
Sbjct: 517 SSNATEEFESECIICREDIDLENGTVQCPRCTEIYHSHCATQWLSQKPTCPK 568
>AC024806-4|AAF59525.1| 192|Caenorhabditis elegans Hypothetical
protein Y52E8A.2 protein.
Length = 192
Score = 36.7 bits (81), Expect = 0.010
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Frame = +2
Query: 281 PRLSYNEDVLSDSK----GECVICLEE-LSAGDTIARLPCLCIYHKGCIDQWFEVNRSCP 445
P +S++ + S S C+ICL++ +S TI C +H C QWF+ CP
Sbjct: 118 PSVSFSSSISSSSAELSDARCLICLDDVISTEKTIKCNSCRRRFHLDCASQWFKEKSVCP 177
>AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical
protein C09E7.5 protein.
Length = 496
Score = 36.3 bits (80), Expect = 0.013
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +2
Query: 326 ECVICLEELSAGDTIARLPCLCIYHKGCIDQWFEVNRSCP 445
EC ICLEE+ + C +H C +W R CP
Sbjct: 441 ECAICLEEMYNFKETIKCECRRRFHSKCATKWLNEKRECP 480
>Z81075-6|CAB03049.1| 564|Caenorhabditis elegans Hypothetical
protein F26E4.11 protein.
Length = 564
Score = 35.5 bits (78), Expect = 0.023
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +2
Query: 290 SYNEDVLSDSKGECVICLEELSAGDTIARLPCLCIYHKGCIDQWFEVNRSCP 445
SY ++ CV+C E L T RLPC +H C+ W + SCP
Sbjct: 322 SYPSVKCANGDDRCVVCWELLG---TSRRLPCSHQFHDWCLMWWLAQDSSCP 370
>Z81070-13|CAB03009.1| 564|Caenorhabditis elegans Hypothetical
protein F26E4.11 protein.
Length = 564
Score = 35.5 bits (78), Expect = 0.023
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +2
Query: 290 SYNEDVLSDSKGECVICLEELSAGDTIARLPCLCIYHKGCIDQWFEVNRSCP 445
SY ++ CV+C E L T RLPC +H C+ W + SCP
Sbjct: 322 SYPSVKCANGDDRCVVCWELLG---TSRRLPCSHQFHDWCLMWWLAQDSSCP 370
>AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical
protein C09E7.8b protein.
Length = 1080
Score = 35.5 bits (78), Expect = 0.023
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2
Query: 326 ECVICLEELSAGDTIARLPCLCIYHKGCIDQWFEVNRSCP 445
EC ICL+E++ + C +H C +W R CP
Sbjct: 1025 ECAICLDEMTNFKETIKCQCRRRFHLECATKWLNEKRECP 1064
>AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical
protein C09E7.8a protein.
Length = 1114
Score = 35.5 bits (78), Expect = 0.023
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2
Query: 326 ECVICLEELSAGDTIARLPCLCIYHKGCIDQWFEVNRSCP 445
EC ICL+E++ + C +H C +W R CP
Sbjct: 1059 ECAICLDEMTNFKETIKCQCRRRFHLECATKWLNEKRECP 1098
>AC006607-7|AAL00855.1| 789|Caenorhabditis elegans Hypothetical
protein C09E7.9 protein.
Length = 789
Score = 35.5 bits (78), Expect = 0.023
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2
Query: 326 ECVICLEELSAGDTIARLPCLCIYHKGCIDQWFEVNRSCP 445
EC ICL+E++ + C +H C +W R CP
Sbjct: 734 ECAICLDEMTNFKETIKCECRRRFHLKCATKWLNEKRECP 773
>U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical
protein EEED8.16 protein.
Length = 590
Score = 35.1 bits (77), Expect = 0.030
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = +2
Query: 263 VMCLTRPRLSYNEDVLSDSKGECVICLEELSAGDTIARLPCLCIYHKGCIDQWFEVNRSC 442
+ C T L ++D C +CLE + D++ + C +H C++QW + +C
Sbjct: 238 IECTTSNDLFSSDDTSLTELPTCAVCLERMD--DSVLAILCNHSFHARCLEQW--ADNTC 293
Query: 443 P 445
P
Sbjct: 294 P 294
>Z11115-11|CAA77447.1| 161|Caenorhabditis elegans Hypothetical
protein ZK637.14 protein.
Length = 161
Score = 34.3 bits (75), Expect = 0.052
Identities = 18/68 (26%), Positives = 32/68 (47%)
Frame = +2
Query: 242 DDIECHLVMCLTRPRLSYNEDVLSDSKGECVICLEELSAGDTIARLPCLCIYHKGCIDQW 421
+D C +CL L N D+ D + + ++ + G T+ +PC +H C+ W
Sbjct: 68 EDATC--AICLDN--LQNNVDIPEDHVIKEELKIDPTTFGTTVIVMPCKHRFHYFCLTLW 123
Query: 422 FEVNRSCP 445
E ++CP
Sbjct: 124 LEAQQTCP 131
>U80449-2|AAB37826.1| 112|Caenorhabditis elegans Hypothetical
protein R10A10.2 protein.
Length = 112
Score = 31.9 bits (69), Expect = 0.28
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +2
Query: 326 ECVICLEELSAGDTIARLPCLCIYHKGCIDQWFEVNRSCP 445
EC+ C E SA + C +H C+ QW N CP
Sbjct: 60 ECLRCQSEPSAECYVVWGDCNHSFHHCCMTQWIRQNNRCP 99
>AC006712-2|AAK39324.1| 754|Caenorhabditis elegans Hypothetical
protein Y119C1B.5 protein.
Length = 754
Score = 31.5 bits (68), Expect = 0.37
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +2
Query: 284 RLSYNEDV-LSDSKGECVICLEELSAGDTIARLPCLCIYHKGCIDQWFEVNRSCP 445
RLS + V L + + C IC E+ I PC +H C+ +W V CP
Sbjct: 588 RLSKADVVQLREREDVCAICFIEMKEEARIT--PCKHYFHGPCLRKWLAVKMVCP 640
>Z70208-5|CAA94134.1| 201|Caenorhabditis elegans Hypothetical
protein F54B11.5 protein.
Length = 201
Score = 30.7 bits (66), Expect = 0.65
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +2
Query: 311 SDSKGECVICLEELSAGDTIARLPCLCIYHKGCIDQWFEVNR--SCP 445
SD +G CVIC+E ++ D + LPCL + CI E SCP
Sbjct: 123 SDVEGNCVICMENIN--DLL--LPCLHAFCIRCIANEMEYRHDFSCP 165
>U58750-3|AAB00643.2| 350|Caenorhabditis elegans Hypothetical
protein F55G1.6 protein.
Length = 350
Score = 30.7 bits (66), Expect = 0.65
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 6/52 (11%)
Frame = +2
Query: 311 SDSKGECVICLEE--LSAGDTIA-RL-PCLC--IYHKGCIDQWFEVNRSCPE 448
S S G C C + L GD + +L PC C ++H GC+ E SC E
Sbjct: 112 STSPGTCTNCNDSNYLEDGDVLGYKLKPCFCRKLFHFGCLRSLIEEQASCSE 163
>U89792-1|AAB94380.1| 339|Caenorhabditis elegans seven-in-absentia
protein homologue-1 protein.
Length = 339
Score = 30.3 bits (65), Expect = 0.85
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 3/30 (10%)
Frame = +2
Query: 209 KCPVCSKFVLPDDIEC---HLVMCLTRPRL 289
+CPVC +++LP ++C HLV RP+L
Sbjct: 89 ECPVCLEYMLPPYMQCSSGHLVCSNCRPKL 118
>AC024759-5|AAK68432.1| 419|Caenorhabditis elegans Hypothetical
protein Y37E11AR.2 protein.
Length = 419
Score = 30.3 bits (65), Expect = 0.85
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 3/30 (10%)
Frame = +2
Query: 209 KCPVCSKFVLPDDIEC---HLVMCLTRPRL 289
+CPVC +++LP ++C HLV RP+L
Sbjct: 155 ECPVCLEYMLPPYMQCSSGHLVCSNCRPKL 184
>Z70205-2|CAA94116.1| 529|Caenorhabditis elegans Hypothetical
protein C11H1.3 protein.
Length = 529
Score = 29.9 bits (64), Expect = 1.1
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +2
Query: 302 DVLSDSKG-ECVICLEELSAGDTIARLPC--LCIYHKGCIDQWFEVNRSCP 445
+ + D G EC+ICL ++ DT+ LPC LC+ C D + +CP
Sbjct: 259 ETMDDDSGLECIICLSDIR--DTVI-LPCRHLCVC-SNCADSLRYKHNNCP 305
>Z36948-1|CAA85409.1| 180|Caenorhabditis elegans Hypothetical
protein D2089.2 protein.
Length = 180
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
Frame = +2
Query: 329 CVICLEELSAGDTIARLPCLC-----IYHKGCIDQW 421
C IC + ++ D++ + PC C H GC++QW
Sbjct: 25 CRICFDNDTSSDSLIK-PCSCSGTVAYVHNGCLEQW 59
>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
presynaptic morphologyprotein 1 protein.
Length = 3766
Score = 29.1 bits (62), Expect = 2.0
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = +2
Query: 221 CSKFV--LPDDIECHLVMCLTRPRLSYNEDVLSDSKGECVICLEELSAGDTIARLPCLCI 394
C+ F + ++ EC + C+T R ED D CVIC E RL C +
Sbjct: 3485 CNHFCGGIRNEEEC--LPCMTCKR----EDAAQDGDDVCVICFTERLGAAPCIRLGCGHM 3538
Query: 395 YHKGCI 412
+H C+
Sbjct: 3539 FHFHCV 3544
>Z47075-3|CAA87383.2| 182|Caenorhabditis elegans Hypothetical
protein E02H1.6 protein.
Length = 182
Score = 27.9 bits (59), Expect = 4.6
Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +2
Query: 224 SKFVLPDDIECHLV-MCLTRPRLSYNEDVLSDSKGECVICLEE 349
S+F + +++EC + L R SY+ED++ + + E +EE
Sbjct: 120 SEFKIKENVECEIFGTLLEEARESYSEDIVHELQSETTEQMEE 162
>Z19156-2|CAE17940.2| 275|Caenorhabditis elegans Hypothetical
protein T02C1.2 protein.
Length = 275
Score = 27.9 bits (59), Expect = 4.6
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +2
Query: 296 NEDVLSDSKGECVICLEELSAGDTIARLPCLCIYHKGCIDQWFEVNRSCP 445
N + L + C IC + + T L C + K CIDQ + R CP
Sbjct: 89 NSNDLDEDDVLCTICYDIIVEPHT---LRCQHSFCKKCIDQCLPLTRKCP 135
>AC006790-9|AAF60735.1| 382|Caenorhabditis elegans Hypothetical
protein Y49F6B.9 protein.
Length = 382
Score = 27.9 bits (59), Expect = 4.6
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +2
Query: 287 LSYNEDVLSDSKGECVICLEELSAGDTIARLPCLCIYHKGCIDQWFEVN 433
L + E+ S + EC +C E + AG + C +Y + CI ++ E++
Sbjct: 29 LKFQEE--SGAMKECELCCEMVPAGAFCQLINCRHVYCRICIRKYMELS 75
>U80446-2|AAB37803.1| 1562|Caenorhabditis elegans Nuclear pore complex
protein protein6, isoform a protein.
Length = 1562
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 268 HYEMALDVVR*NELAAHRTFYTLSCTGIFI 179
H++ A D+ R L +HR F+T++ I I
Sbjct: 1341 HFDEAFDIARQFNLDSHRLFFTMTREAIMI 1370
>U67953-1|AAQ91892.1| 398|Caenorhabditis elegans Hypothetical
protein ZC13.1b protein.
Length = 398
Score = 27.1 bits (57), Expect = 8.0
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = +2
Query: 329 CVICLEELSAGDTIARLPCLCIYHKGCIDQWFEVNRSCP 445
C +C +L +L C ++ K CI+ W + +CP
Sbjct: 337 CAVCHGDLLQP---IKLECTHVFCKFCIETWLDQKSTCP 372
>AF016655-11|AAK31434.1| 162|Caenorhabditis elegans Hypothetical
protein C17F4.1 protein.
Length = 162
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -3
Query: 436 PVHFEPLIYAPFMIDAEARQAGDSVA-RGQLLEAY 335
P+HF+ + P M+D +A A DSVA G+ + Y
Sbjct: 121 PIHFQSYQFQPAMMD-DAECAADSVASMGRTISGY 154
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,968,542
Number of Sequences: 27780
Number of extensions: 187546
Number of successful extensions: 591
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 590
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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