Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32421
(516 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.09c |ucp12||ATP-dependent RNA helicase Ucp1 |Schizosacch... 30 0.18
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 30 0.24
SPBC20F10.05 |||DuF1740 family protein|Schizosaccharomyces pombe... 29 0.41
SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces pom... 28 0.72
SPAC4F8.04 |||Brix domain protein Rpf1|Schizosaccharomyces pombe... 27 1.3
SPBC1105.04c |cbp1|abp1|CENP-B homolog|Schizosaccharomyces pombe... 27 1.3
SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3 |Schiz... 27 2.2
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 2.9
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 26 2.9
SPCC594.05c |||COMPASS complex subunit |Schizosaccharomyces pomb... 26 3.8
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S... 26 3.8
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 26 3.8
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 25 5.1
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 25 5.1
SPBC8D2.13 |||SHQ1 family protein|Schizosaccharomyces pombe|chr ... 25 6.7
SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces pom... 25 8.9
SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces pomb... 25 8.9
SPBC649.03 |rhp14||XP-A family homolog Rhp14|Schizosaccharomyces... 25 8.9
SPAC25H1.02 |jmj1||Jmj1 protein|Schizosaccharomyces pombe|chr 1|... 25 8.9
SPBC1604.08c |imp1||importin alpha|Schizosaccharomyces pombe|chr... 25 8.9
SPBC1709.14 |||peptide N-glycanase |Schizosaccharomyces pombe|ch... 25 8.9
SPBC354.13 |rga6||GTPase activating protein Rga6|Schizosaccharom... 25 8.9
SPAC25A8.02 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 8.9
>SPCC895.09c |ucp12||ATP-dependent RNA helicase Ucp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1327
Score = 30.3 bits (65), Expect = 0.18
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +1
Query: 355 PTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDW 504
PT KK + ++ K + ++ +E N + VK + L+ ++EK P W
Sbjct: 531 PTAKKNNSFKPKLFRRSRELSEKLCNNWSERVKSPSYQLKVREREKLPAW 580
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 29.9 bits (64), Expect = 0.24
Identities = 14/56 (25%), Positives = 29/56 (51%)
Frame = +1
Query: 169 GKPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDL 336
G ID++ +++KR Y ++ ++ LE ++R + EISD +++ L
Sbjct: 837 GSDNRIDESELNSVKRSLLKYENKLQIIKSSSSGLEEQMQRINSEISDKRNELESL 892
>SPBC20F10.05 |||DuF1740 family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 972
Score = 29.1 bits (62), Expect = 0.41
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +1
Query: 229 YHERIARLEDEKFDLEYIVKRKDMEISDLNS---QVNDLRGKFVKPTLKKVSKYENKFAK 399
+H+ + +DE Y++ K ME +L+ QVN + K +K VS + N +A+
Sbjct: 578 FHQLVFSADDEYLASVYLIYLKQMETKNLSEEKPQVNKIVKKILKKYDSSVSVW-NTYAQ 636
Query: 400 LQKKAAEF 423
L+ + F
Sbjct: 637 LEHLSGAF 644
>SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1125
Score = 28.3 bits (60), Expect = 0.72
Identities = 16/58 (27%), Positives = 32/58 (55%)
Frame = +1
Query: 211 KRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYE 384
+R+C+ + + + + +DL++ E S L+ QVNDL + K T +K+S+ +
Sbjct: 897 QRLCEGRTKELLNSQQKLYDLKHSYSSVMTEKSKLSDQVNDLTEQ-AKITQRKLSEVQ 953
>SPAC4F8.04 |||Brix domain protein Rpf1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 306
Score = 27.5 bits (58), Expect = 1.3
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +1
Query: 370 VSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEE-DKEKK 495
+ K +NK + Q+ + +N+ K+ ++KE EEE D EKK
Sbjct: 1 MGKIKNKIVRQQQYMKALHQKNKDKLERRKERAKEEEKDPEKK 43
>SPBC1105.04c |cbp1|abp1|CENP-B homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 27.5 bits (58), Expect = 1.3
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 178 KNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKD 297
+NI D++ED I ++ Y + A DE+ E+ + KD
Sbjct: 435 ENIVDSSEDIINQIASQYMDDRAFETDEEESTEFQITTKD 474
>SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1253
Score = 26.6 bits (56), Expect = 2.2
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 424 NFRNQLKVVKKKEFTLEEEDKEKKPDWSKG 513
+FRNQ+K ++ L E+ KE W +G
Sbjct: 1070 DFRNQIKSQTERILVLREKKKEDPISWMEG 1099
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 26.2 bits (55), Expect = 2.9
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Frame = +1
Query: 250 LEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLK-KVSKYENKFAKLQKK-AAEF 423
LE + L + ++KD +I +L ++NDL + TLK E K + K+ AA
Sbjct: 149 LEKQVKTLHDLNEQKDKKIKELKERINDLTYDY--ETLKANADDSEGKQTLVSKREAALE 206
Query: 424 NFRNQLKV----VKKKEFTLE-EEDKEKK 495
F+++L + + K+E + +ED KK
Sbjct: 207 EFQSKLLIRENEINKRELKMNGKEDDLKK 235
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 26.2 bits (55), Expect = 2.9
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +1
Query: 289 RKDMEISDLNSQVNDLRGKFVKPTLKKVS-KYENKFAKLQKKAAEFNFRNQLKVVKKKEF 465
R ++E +L QVN+L+G V P S ++ N ++ KA ++Q+ K K F
Sbjct: 1423 RLNLEKHNLEKQVNELKGAEVSPQPTGQSLQHVNLAHAIELKA----LKDQINSEKAKMF 1478
Query: 466 TLEEEDKEKKPDWSK 510
+++ + ++++ + K
Sbjct: 1479 SVQVQYEKREQELQK 1493
>SPCC594.05c |||COMPASS complex subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 424
Score = 25.8 bits (54), Expect = 3.8
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +1
Query: 199 EDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVN 330
ED+ + D+H A E+EK + K ME+ ++N V+
Sbjct: 23 EDSNRGTITDFHIETANNEEEKDANVILNKSVKMEVEEVNGHVD 66
>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 25.8 bits (54), Expect = 3.8
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = -1
Query: 276 FQIEFFIFKTSDAFMVVFANPLNSIFVGVVNVLRFTAPLLD 154
+ +++ + K + M V +PL S F+ +N LRF + D
Sbjct: 781 YLLKYSLGKGAKTLMFVNVSPLKSQFMDTLNSLRFATKVND 821
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 25.8 bits (54), Expect = 3.8
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +1
Query: 229 YHERIARLEDEKFDLEYIVKRKDMEISDLNSQV 327
+HE I +L+D + +L +++K++ IS L V
Sbjct: 599 FHESINKLQDREKELTSNLEKKNLVISSLRETV 631
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 25.4 bits (53), Expect = 5.1
Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +1
Query: 286 KRKDMEISDLNSQVNDLRGKFVKPTLKK-VSKYENKFAKLQKKAAEFNFRNQLKVVKKKE 462
K+ D I+ S + G+ + P L + + +E++F Q+ AE+ + Q + + +
Sbjct: 1368 KQTDTGITHFRSGMTT-NGEHLIPNLYRYIQPWESEFIDSQRVWAEYAMKRQEALQQNRR 1426
Query: 463 FTLEE 477
TLE+
Sbjct: 1427 LTLED 1431
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 25.4 bits (53), Expect = 5.1
Identities = 19/92 (20%), Positives = 36/92 (39%)
Frame = +1
Query: 208 IKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYEN 387
+K + H ++ E + E K I + + ++ + K VK ++ + +
Sbjct: 376 LKESNRTIHSQLTDAESKLSSFEQENKSLKGSIDEYQNNLSS-KDKMVKQVSSQLEEARS 434
Query: 388 KFAKLQKKAAEFNFRNQLKVVKKKEFTLEEED 483
A K AE N + K K+F E+D
Sbjct: 435 SLAHATGKLAEINSERDFQNKKIKDFEKIEQD 466
>SPBC8D2.13 |||SHQ1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 451
Score = 25.0 bits (52), Expect = 6.7
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +1
Query: 247 RLEDEKFDLE-YIVKRKDME-ISDLNSQVNDLRGKFV 351
+LEDEKFD E Y+ D E I ++ + D G+F+
Sbjct: 206 QLEDEKFDAEHYMADFYDREMIDEILHYIPDYIGEFL 242
>SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 24.6 bits (51), Expect = 8.9
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 334 LRGKFVKPTLKKVSKYENKFAKL 402
L+GKF+K KY+N+F +L
Sbjct: 359 LKGKFLKDLNNLFEKYDNEFDEL 381
>SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 952
Score = 24.6 bits (51), Expect = 8.9
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = -2
Query: 422 NSAAFFWSLANLFSYLETFFSVGLTNLPLRSLTWEFRSEISISFLLTMYS 273
N+ +F SLA+ ++ T + L N L F+S +++ LL +++
Sbjct: 130 NAKKYFSSLADGHNFTLTLYKFSLDNQTFSQLLSRFKSFATLTELLQVHN 179
>SPBC649.03 |rhp14||XP-A family homolog Rhp14|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 289
Score = 24.6 bits (51), Expect = 8.9
Identities = 15/80 (18%), Positives = 44/80 (55%)
Frame = +1
Query: 262 KFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQL 441
++ +E K+K + L+++ R + K +K+ K+E + +L+K+ N+ +++
Sbjct: 194 RYQVEEFAKKKWGSMEALDAEFE--RREVQKKEMKE-KKFEKQLLELRKRTRTSNY-SRM 249
Query: 442 KVVKKKEFTLEEEDKEKKPD 501
+ +K++ +++ +KP+
Sbjct: 250 SIREKRKHVHSYDEEFEKPN 269
>SPAC25H1.02 |jmj1||Jmj1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 464
Score = 24.6 bits (51), Expect = 8.9
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +1
Query: 196 NEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLN 318
N++ IK + Y ERI ED+ L+ ++ + E + N
Sbjct: 87 NDNDIKNFIRSYAERIVNNEDKNVFLDSLLLSPNYEYLEEN 127
>SPBC1604.08c |imp1||importin alpha|Schizosaccharomyces pombe|chr
2|||Manual
Length = 539
Score = 24.6 bits (51), Expect = 8.9
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = +1
Query: 304 ISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEE 480
+SD S+ +G F L++ + + + QK+ N R L V + + +EEE
Sbjct: 6 LSDRRSRFKS-KGVFKADELRRQREEQQIEIRKQKREESLNKRRNLNAVLQNDIDVEEE 63
>SPBC1709.14 |||peptide N-glycanase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 333
Score = 24.6 bits (51), Expect = 8.9
Identities = 13/59 (22%), Positives = 28/59 (47%)
Frame = +1
Query: 325 VNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPD 501
V D+ ++++ + + + LQ+ E N + ++ + LEEEDK +K +
Sbjct: 238 VRDVSHRYIRHPENGLPRDRCPESVLQQALHEINIEFRSRLTDSERKALEEEDKREKDE 296
>SPBC354.13 |rga6||GTPase activating protein
Rga6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 733
Score = 24.6 bits (51), Expect = 8.9
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -1
Query: 228 VFANPLNSIFVGVVNVLRFTAPLLDDAPP 142
VF P+ + N+ +FT P + APP
Sbjct: 299 VFGKPIGDLTSDPTNLCKFTFPTPECAPP 327
>SPAC25A8.02 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 390
Score = 24.6 bits (51), Expect = 8.9
Identities = 14/67 (20%), Positives = 29/67 (43%)
Frame = +1
Query: 211 KRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENK 390
K + D H R +ED+ + + + +++ L+ +D K ++ +NK
Sbjct: 82 KSLSCDLHSRKQLIEDDLSNRKKSINIASQKLAGLSHSTSDYFSKEYLTAYRRSELLQNK 141
Query: 391 FAKLQKK 411
+ QKK
Sbjct: 142 LHEYQKK 148
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.312 0.131 0.368
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,597,845
Number of Sequences: 5004
Number of extensions: 28846
Number of successful extensions: 135
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 135
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 208287218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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