Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32418
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039719-10|AAB96751.2|  568|Caenorhabditis elegans Hypothetical...    28   3.4  
AF039044-1|AAG24127.1|  272|Caenorhabditis elegans Hypothetical ...    28   3.4  
Z81588-1|CAB04716.1|  281|Caenorhabditis elegans Hypothetical pr...    28   4.6  
Z95622-1|CAB09132.2|  480|Caenorhabditis elegans Hypothetical pr...    27   6.0  
Z68493-10|CAA92797.2|  329|Caenorhabditis elegans Hypothetical p...    27   6.0  
Z68131-3|CAA92219.2|  480|Caenorhabditis elegans Hypothetical pr...    27   6.0  
AF497823-1|AAM18101.1|  479|Caenorhabditis elegans putative Na-H...    27   6.0  
Z93383-6|CAB07623.1|  283|Caenorhabditis elegans Hypothetical pr...    27   8.0  

>AF039719-10|AAB96751.2|  568|Caenorhabditis elegans Hypothetical
           protein K04F10.2 protein.
          Length = 568

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = -2

Query: 95  FLYEFRYTNFTALSITFYDYVSL 27
           +L +F   NFT +SITF+D V+L
Sbjct: 324 WLVDFDSKNFTTISITFHDNVAL 346


>AF039044-1|AAG24127.1|  272|Caenorhabditis elegans Hypothetical
           protein F48G7.13 protein.
          Length = 272

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
 Frame = -1

Query: 381 TIPSYKLCKQLRNV*KIYTNFNICKFITFFL----QFIIYLLVHQSHFEI 244
           T    KLC   RN  K + NF+  K I FFL    QF+ + L+  S+F +
Sbjct: 192 TYKMQKLCFNSRNSSK-FLNFSKTKIINFFLHFLFQFVKFELIPNSNFGV 240


>Z81588-1|CAB04716.1|  281|Caenorhabditis elegans Hypothetical
           protein T07D10.1 protein.
          Length = 281

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 9/19 (47%), Positives = 16/19 (84%)
 Frame = -1

Query: 294 FLQFIIYLLVHQSHFEIHI 238
           FL F++YLL+HQ +++I +
Sbjct: 17  FLMFLLYLLLHQIYYQIKL 35


>Z95622-1|CAB09132.2|  480|Caenorhabditis elegans Hypothetical
           protein B0395.1 protein.
          Length = 480

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
 Frame = +2

Query: 386 RHNCEKSAIMLILDKFS*IITREL-LCD-YLHPDLKLIHLL 502
           RH   +SA++++L  F+     EL   D +LHPDL  ++LL
Sbjct: 5   RHFFPESAVLIVLGLFAGFTIYELWTVDLFLHPDLFFLYLL 45


>Z68493-10|CAA92797.2|  329|Caenorhabditis elegans Hypothetical
           protein C33A12.14 protein.
          Length = 329

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 11/43 (25%), Positives = 25/43 (58%)
 Frame = -2

Query: 137 SYCPRVPNPKYIIYFLYEFRYTNFTALSITFYDYVSLIKYLIL 9
           SYC  +   K+++   +   YTN+TA+   F  ++ +++ +I+
Sbjct: 98  SYCASIEPNKWLLTISFFTSYTNYTAMIYPF--FMPIVRLIII 138


>Z68131-3|CAA92219.2|  480|Caenorhabditis elegans Hypothetical
           protein B0395.1 protein.
          Length = 480

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
 Frame = +2

Query: 386 RHNCEKSAIMLILDKFS*IITREL-LCD-YLHPDLKLIHLL 502
           RH   +SA++++L  F+     EL   D +LHPDL  ++LL
Sbjct: 5   RHFFPESAVLIVLGLFAGFTIYELWTVDLFLHPDLFFLYLL 45


>AF497823-1|AAM18101.1|  479|Caenorhabditis elegans putative Na-H
           exchanger isoform 1 protein.
          Length = 479

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
 Frame = +2

Query: 386 RHNCEKSAIMLILDKFS*IITREL-LCD-YLHPDLKLIHLL 502
           RH   +SA++++L  F+     EL   D +LHPDL  ++LL
Sbjct: 4   RHFFPESAVLIVLGLFAGFTIYELWTVDLFLHPDLFFLYLL 44


>Z93383-6|CAB07623.1|  283|Caenorhabditis elegans Hypothetical
           protein F54B8.6 protein.
          Length = 283

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = -2

Query: 332 YILTLTSVSLLHFFYNS*FIYWCTNLILKFILSSMEL 222
           Y   LT   ++HF   +  I +CT L+++F+ +  E+
Sbjct: 169 YNYYLTQEQIVHFSIGTMTICFCTRLLIRFLTAKSEV 205


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,615,657
Number of Sequences: 27780
Number of extensions: 212551
Number of successful extensions: 460
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 460
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)