Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32414
(516 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 304 4e-84
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 304 5e-84
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 304 5e-84
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 174 7e-45
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 166 2e-42
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 110 1e-25
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 58 1e-09
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 48 1e-06
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 46 4e-06
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 44 1e-05
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 44 1e-05
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 37 0.002
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 33 0.003
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 32 0.059
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 31 0.077
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 30 0.24
SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces p... 29 0.31
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 27 1.7
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 27 2.2
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 26 3.8
SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pomb... 25 5.1
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 25 6.7
SPAC1687.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 8.9
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 304 bits (747), Expect = 4e-84
Identities = 143/158 (90%), Positives = 149/158 (94%)
Frame = +1
Query: 31 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 210
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 211 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIXAAGT 390
DKLKAERERGITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCAVLI GT
Sbjct: 61 DKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAVLIIGGGT 120
Query: 391 GEFEAGISKNGQTREHALLAFXLGVKQLIVXVNKMDST 504
GEFEAGISK+GQTREHALLA+ LGVKQLIV VNKMD+T
Sbjct: 121 GEFEAGISKDGQTREHALLAYTLGVKQLIVAVNKMDTT 158
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 304 bits (746), Expect = 5e-84
Identities = 142/158 (89%), Positives = 149/158 (94%)
Frame = +1
Query: 31 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 210
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 211 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIXAAGT 390
DKLKAERERGITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI GT
Sbjct: 61 DKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGT 120
Query: 391 GEFEAGISKNGQTREHALLAFXLGVKQLIVXVNKMDST 504
GEFEAGISK+GQTREHALLA+ LGVKQLIV VNKMD+T
Sbjct: 121 GEFEAGISKDGQTREHALLAYTLGVKQLIVAVNKMDTT 158
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 304 bits (746), Expect = 5e-84
Identities = 142/158 (89%), Positives = 149/158 (94%)
Frame = +1
Query: 31 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 210
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 211 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIXAAGT 390
DKLKAERERGITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI GT
Sbjct: 61 DKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGT 120
Query: 391 GEFEAGISKNGQTREHALLAFXLGVKQLIVXVNKMDST 504
GEFEAGISK+GQTREHALLA+ LGVKQLIV VNKMD+T
Sbjct: 121 GEFEAGISKDGQTREHALLAYTLGVKQLIVAVNKMDTT 158
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 174 bits (423), Expect = 7e-45
Identities = 78/152 (51%), Positives = 107/152 (70%)
Frame = +1
Query: 43 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 222
K H+NIV IGHVD+GKST G++++ G +DKRT+EK E+EA+E GK S+ +W LD
Sbjct: 236 KEHVNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTS 295
Query: 223 AERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIXAAGTGEFE 402
ERE+G T+++ FET +++DAPGH+ ++ NMI G SQAD VL+ +A GEFE
Sbjct: 296 EEREKGKTVEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFE 355
Query: 403 AGISKNGQTREHALLAFXLGVKQLIVXVNKMD 498
AG + GQTREHA+LA G+ L+V +NKMD
Sbjct: 356 AGFERGGQTREHAVLARTQGINHLVVVINKMD 387
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 166 bits (403), Expect = 2e-42
Identities = 77/152 (50%), Positives = 102/152 (67%)
Frame = +1
Query: 43 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 222
K +++VV GHVDSGKST G ++++ G I+ R+++K EA GKGSF YAW+LD +
Sbjct: 175 KPVVHLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTE 234
Query: 223 AERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIXAAGTGEFE 402
ER RG+T+D+A FE+ K I DAPGHRDFI MI G S AD AVL+ + FE
Sbjct: 235 EERARGVTMDVASTTFESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLVVDSSQNNFE 294
Query: 403 AGISKNGQTREHALLAFXLGVKQLIVXVNKMD 498
G +NGQTREHA L LG+ +++V VNK+D
Sbjct: 295 RGFLENGQTREHAYLLRALGISEIVVSVNKLD 326
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 110 bits (264), Expect = 1e-25
Identities = 64/158 (40%), Positives = 90/158 (56%)
Frame = +1
Query: 37 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 216
++K H+NI IGHVD GK+T T I KC ++G+ SF +DK
Sbjct: 49 RKKPHVNIGTIGHVDHGKTTLTA-AITKC--------------LSDLGQASFMDYSQIDK 93
Query: 217 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIXAAGTGE 396
E+ RGITI A ++ET+ + +D PGH D+IKNMITG + D A+++ +A G+
Sbjct: 94 APEEKARGITISSAHVEYETANRHYAHVDCPGHADYIKNMITGAATMDGAIIVVSATDGQ 153
Query: 397 FEAGISKNGQTREHALLAFXLGVKQLIVXVNKMDSTEP 510
QTREH LLA +GVKQ++V +NK+D EP
Sbjct: 154 MP-------QTREHLLLARQVGVKQIVVYINKVDMVEP 184
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 57.6 bits (133), Expect = 1e-09
Identities = 48/148 (32%), Positives = 69/148 (46%)
Frame = +1
Query: 55 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 234
N+ +I H+D+GK+T T ++Y G F + G V+D L AER+
Sbjct: 30 NVGIIAHIDAGKTTLTEKMLYYGG---------FTSHFGNVDTGDT----VMDYLPAERQ 76
Query: 235 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIXAAGTGEFEAGIS 414
RGITI+ A F + +ID PGH DF T + AVL A + AG+
Sbjct: 77 RGITINSAAISFTWRNQRINLIDTPGHADF-----TFEVERSVAVLDGAVAIIDGSAGV- 130
Query: 415 KNGQTREHALLAFXLGVKQLIVXVNKMD 498
QT+ A G+ + ++ VNKMD
Sbjct: 131 -EAQTKVVWKQATKRGIPK-VIFVNKMD 156
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 47.6 bits (108), Expect = 1e-06
Identities = 46/147 (31%), Positives = 66/147 (44%), Gaps = 19/147 (12%)
Frame = +1
Query: 55 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 234
NI + H+DSGK+T T ++Y G I K+ E+ +G +D ++ ERE
Sbjct: 61 NIGISAHIDSGKTTFTERVLYYTGRI---------KDIHEV-RGKDNVGAKMDFMELERE 110
Query: 235 RGITIDIA----LWK---------------FETSKYYVTIIDAPGHRDFIKNMITGTSQA 357
+GITI A W+ FE S Y + IID PGH DF +
Sbjct: 111 KGITIQSAATHCTWERTVDQIEANEKQKTDFEKS-YNINIIDTPGHIDFTIEVERALRVL 169
Query: 358 DCAVLIXAAGTGEFEAGISKNGQTREH 438
D AVL+ A +G I+ + Q R +
Sbjct: 170 DGAVLVLCAVSGVQSQTITVDRQMRRY 196
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 45.6 bits (103), Expect = 4e-06
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 4/117 (3%)
Frame = +1
Query: 55 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 234
N VI H+D GKST + ++ G I++ + F LDKL+ ER
Sbjct: 60 NWAVIAHIDHGKSTLSDCILKLTGVINEHNF-----------RNQF-----LDKLEVERR 103
Query: 235 RGITIDIA----LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIXAAGTG 393
RGIT+ ++ + Y + +ID PGH DF ++ + + +L+ A G
Sbjct: 104 RGITVKAQTCSMIYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILLVDASQG 160
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 44.0 bits (99), Expect = 1e-05
Identities = 37/118 (31%), Positives = 54/118 (45%), Gaps = 3/118 (2%)
Frame = +1
Query: 31 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGID--KRTIEKF-EKEAQEMGKGSFKYA 201
MGK N+ VI HVD GKST T L+ K G I K +F + A E +G +
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTRADEQERGVTIKS 72
Query: 202 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 375
+ L AE D+ + + + V +ID+PGH DF + D A+++
Sbjct: 73 TAI-SLFAEMTDDDMKDMK-EPADGTDFLVNLIDSPGHVDFSSEVTAALRVTDGALVV 128
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 44.0 bits (99), Expect = 1e-05
Identities = 37/118 (31%), Positives = 54/118 (45%), Gaps = 3/118 (2%)
Frame = +1
Query: 31 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGID--KRTIEKF-EKEAQEMGKGSFKYA 201
MGK N+ VI HVD GKST T L+ K G I K +F + A E +G +
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTRADEQERGVTIKS 72
Query: 202 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 375
+ L AE D+ + + + V +ID+PGH DF + D A+++
Sbjct: 73 TAI-SLFAEMTDDDMKDMK-EPADGTDFLVNLIDSPGHVDFSSEVTAALRVTDGALVV 128
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 36.7 bits (81), Expect = 0.002
Identities = 20/71 (28%), Positives = 33/71 (46%)
Frame = +1
Query: 286 YVTIIDAPGHRDFIKNMITGTSQADCAVLIXAAGTGEFEAGISKNGQTREHALLAFXLGV 465
+V+ +D PGH + M+ G + D A+L+ A QT EH + +
Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNES------CPQPQTSEHLAAIEIMQL 162
Query: 466 KQLIVXVNKMD 498
K +I+ NK+D
Sbjct: 163 KHIIILQNKVD 173
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 33.1 bits (72), Expect(2) = 0.003
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Frame = +1
Query: 178 GKGSFKYAWVLDKLKAERERGITIDIALWK--FETSKYYVTIIDAPGHRDFIKNMITGTS 351
GK + A+ + + GIT I + F+ ++T +D PGH F G +
Sbjct: 183 GKTTLLDAFRKSTIASTEHGGITQKIGAFTVPFDKGSKFITFLDTPGHMAFEAMRKRGAN 242
Query: 352 QADCAVLIXAAGTG 393
AD VL+ A G
Sbjct: 243 IADIVVLVVAGDDG 256
Score = 22.2 bits (45), Expect(2) = 0.003
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +1
Query: 58 IVVIGHVDSGKST 96
+ ++GHVD GK+T
Sbjct: 174 VTLMGHVDHGKTT 186
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 31.9 bits (69), Expect = 0.059
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
Frame = +1
Query: 64 VIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA--QEMGKGSFKYAWVLDKLKAERER 237
++GHVD+GK+ +L + +++ E Q++G F + K K ++
Sbjct: 489 ILGHVDTGKTKLLDNL-------RRSNVQEGEAGGITQQIGATYFPIESIKQKTKVVNKK 541
Query: 238 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 375
G K + + + IID PGH F GTS + A+L+
Sbjct: 542 G--------KLQYNIPGLLIIDTPGHESFTNLRSRGTSLCNIAILV 579
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 31.5 bits (68), Expect = 0.077
Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 3/116 (2%)
Frame = +1
Query: 55 NIVVIGHVDSGKSTTTGHLIYKCGGIDKR---TIEKFEKEAQEMGKGSFKYAWVLDKLKA 225
N ++ HVD GK+T L+ G I + T+ + E+ +G + K A
Sbjct: 21 NFTLLAHVDHGKTTLADSLLASNGIISSKLAGTVRFLDFREDEITRG------ITMKSSA 74
Query: 226 ERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIXAAGTG 393
I K Y + +ID+PGH DF + + + D A ++ A G
Sbjct: 75 ISLFFKVISQNDEKRVEKDYLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEG 130
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 29.9 bits (64), Expect = 0.24
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +1
Query: 211 DKLKAER-ERGITIDIALWKFETSKYYV--TIIDAPGHRDFIKN 333
+K++A+ E+ + I+I + E +++ T+ID PG DFI N
Sbjct: 60 EKVRAKHAEKTVEIEITKAELEEKNFHLRLTVIDTPGFGDFINN 103
>SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 704
Score = 29.5 bits (63), Expect = 0.31
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -2
Query: 248 IVIPRSRSAFSLSNTQAYLKDPLPISWASFSNFSMVRLSIPPH 120
I IP+ A S+ N++ + +D LP + S V+L +P H
Sbjct: 171 IPIPKKNPARSVCNSKLFNEDTLPAEFEEVSISPPVKLELPTH 213
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 27.1 bits (57), Expect = 1.7
Identities = 27/112 (24%), Positives = 46/112 (41%), Gaps = 5/112 (4%)
Frame = +1
Query: 55 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 234
+ +V GH+ GKS L+Y + + + S +Y D ERE
Sbjct: 142 SFIVAGHLHHGKSALLDLLVYYT-----------HPDTKPPKRRSLRYT---DTHYLERE 187
Query: 235 RGITID-----IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 375
R ++I +A+ + + ID PGH DF+ + + +D VL+
Sbjct: 188 RVMSIKSTPLTLAVSDMKGKTFAFQCIDTPGHVDFVDEVAAPMAISDGVVLV 239
>SPCC63.03 |||DNAJ domain protein, DNAJC11
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 642
Score = 26.6 bits (56), Expect = 2.2
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -2
Query: 272 SNFQRAISIVIPRSRSAFSLSNTQAYLKDPLPISWASFSNFSMV 141
S F IS+ +P FSL+ ++ K LPI W S + S V
Sbjct: 403 STFGVNISVGVPTGSITFSLNWSRLGQKISLPIMWCSVFDRSAV 446
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 25.8 bits (54), Expect = 3.8
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -3
Query: 238 HAHAQPLVCPIPKHI*RILYPFPGPPSRTSRWY 140
H+H PL P+P +L P P P S WY
Sbjct: 135 HSHHPPLHNPLPVSCQPVLRP-PPVPQVPSHWY 166
>SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 662
Score = 25.4 bits (53), Expect = 5.1
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = -3
Query: 217 VCPIPKHI*RILYPFPGPPSRTSRWYVCQYHHICRSSDQWWWT 89
V +PK I I++ F P S S C+Y S D W T
Sbjct: 31 VLNLPKEILIIIFSFLDPRSLLSAQCTCKYWKKLLSDDLSWRT 73
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 25.0 bits (52), Expect = 6.7
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -3
Query: 172 PGPPSRTSRWYVCQYHHIC 116
P PP +T + Y QY+ +C
Sbjct: 8 PAPPKKTLQLYTPQYYGLC 26
>SPAC1687.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 96
Score = 24.6 bits (51), Expect = 8.9
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 342 CDHVLDEISVSRSINDGNIVLASFEL 265
CDH+L IS SR G + FEL
Sbjct: 23 CDHLLQYISNSRDSKAGLKIFLVFEL 48
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,984,492
Number of Sequences: 5004
Number of extensions: 37511
Number of successful extensions: 137
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 130
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 208287218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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