Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32414
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 322 7e-89
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 322 7e-89
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 300 4e-82
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 244 2e-67
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 198 3e-51
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 198 3e-51
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 180 7e-46
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 138 2e-33
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 92 2e-19
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 92 2e-19
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 88 4e-18
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 88 4e-18
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 88 4e-18
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 58 3e-09
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 56 2e-08
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 55 3e-08
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 42 3e-05
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 43 1e-04
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 43 1e-04
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 40 8e-04
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 38 0.004
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 38 0.006
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 34 0.069
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 33 0.12
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 32 0.21
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 32 0.21
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 32 0.28
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 1.5
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 1.5
AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical ... 29 1.5
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 2.6
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 29 2.6
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 28 3.4
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 4.6
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 322 bits (792), Expect = 7e-89
Identities = 151/162 (93%), Positives = 155/162 (95%)
Frame = +1
Query: 31 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 210
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 211 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIXAAGT 390
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+ A GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 391 GEFEAGISKNGQTREHALLAFXLGVKQLIVXVNKMDSTEPPY 516
GEFEAGISKNGQTREHALLA LGVKQLIV NKMDSTEPP+
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPF 162
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 322 bits (792), Expect = 7e-89
Identities = 151/162 (93%), Positives = 155/162 (95%)
Frame = +1
Query: 31 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 210
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 211 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIXAAGT 390
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+ A GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 391 GEFEAGISKNGQTREHALLAFXLGVKQLIVXVNKMDSTEPPY 516
GEFEAGISKNGQTREHALLA LGVKQLIV NKMDSTEPP+
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPF 162
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 300 bits (736), Expect = 4e-82
Identities = 140/149 (93%), Positives = 144/149 (96%)
Frame = +1
Query: 31 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 210
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 211 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIXAAGT 390
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+ A GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 391 GEFEAGISKNGQTREHALLAFXLGVKQLI 477
GEFEAGISKNGQTREHALLA LGVKQL+
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQLV 149
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 244 bits (597), Expect(2) = 2e-67
Identities = 112/117 (95%), Positives = 115/117 (98%)
Frame = +1
Query: 31 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 210
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 211 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIXA 381
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+ A
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 29.1 bits (62), Expect(2) = 2e-67
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1
Query: 472 LIVXVNKMDSTEPPY 516
L+V NKMDSTEPP+
Sbjct: 114 LVVACNKMDSTEPPF 128
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 198 bits (482), Expect = 3e-51
Identities = 91/156 (58%), Positives = 115/156 (73%)
Frame = +1
Query: 40 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 219
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 220 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIXAAGTGEF 399
+ ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+ A TGEF
Sbjct: 227 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 286
Query: 400 EAGISKNGQTREHALLAFXLGVKQLIVXVNKMDSTE 507
E G GQT+EHALL LGV QLIV VNK+D+ +
Sbjct: 287 ETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD 322
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 198 bits (482), Expect = 3e-51
Identities = 91/156 (58%), Positives = 115/156 (73%)
Frame = +1
Query: 40 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 219
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 220 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIXAAGTGEF 399
+ ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+ A TGEF
Sbjct: 245 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 304
Query: 400 EAGISKNGQTREHALLAFXLGVKQLIVXVNKMDSTE 507
E G GQT+EHALL LGV QLIV VNK+D+ +
Sbjct: 305 ETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD 340
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 180 bits (437), Expect = 7e-46
Identities = 80/155 (51%), Positives = 110/155 (70%)
Frame = +1
Query: 34 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 213
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 214 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIXAAGTG 393
ERE+G T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL+ +A G
Sbjct: 164 TNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRG 223
Query: 394 EFEAGISKNGQTREHALLAFXLGVKQLIVXVNKMD 498
EFE G + GQTREH++L GVK L++ VNKMD
Sbjct: 224 EFETGFDRGGQTREHSMLVKTAGVKHLVILVNKMD 258
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 138 bits (335), Expect = 2e-33
Identities = 63/67 (94%), Positives = 64/67 (95%)
Frame = +1
Query: 31 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 210
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 211 DKLKAER 231
DKLK +
Sbjct: 61 DKLKVTK 67
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 91.9 bits (218), Expect = 2e-19
Identities = 61/157 (38%), Positives = 85/157 (54%), Gaps = 2/157 (1%)
Frame = +1
Query: 43 KTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 216
K ++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 217 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIXAAGTGE 396
K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL+ AA G
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGV 145
Query: 397 FEAGISKNGQTREHALLAFXLGVKQLIVXVNKMDSTE 507
E QT+EH +LA +GVK + + +NK D E
Sbjct: 146 ME-------QTKEHLILAKQVGVKNMAIFINKADLVE 175
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 91.9 bits (218), Expect = 2e-19
Identities = 61/157 (38%), Positives = 85/157 (54%), Gaps = 2/157 (1%)
Frame = +1
Query: 43 KTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 216
K ++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 217 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIXAAGTGE 396
K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL+ AA G
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGV 145
Query: 397 FEAGISKNGQTREHALLAFXLGVKQLIVXVNKMDSTE 507
E QT+EH +LA +GVK + + +NK D E
Sbjct: 146 ME-------QTKEHLILAKQVGVKNMAIFINKADLVE 175
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 87.8 bits (208), Expect = 4e-18
Identities = 57/156 (36%), Positives = 81/156 (51%), Gaps = 2/156 (1%)
Frame = +1
Query: 37 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 216
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 89
Query: 217 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIXAAGTGE 396
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+ AA G
Sbjct: 90 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 149
Query: 397 FEAGISKNGQTREHALLAFXLGV--KQLIVXVNKMD 498
QTREH LLA +GV ++V +NK+D
Sbjct: 150 MP-------QTREHLLLARQVGVPLDNIVVFMNKVD 178
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 87.8 bits (208), Expect = 4e-18
Identities = 57/156 (36%), Positives = 81/156 (51%), Gaps = 2/156 (1%)
Frame = +1
Query: 37 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 216
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 217 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIXAAGTGE 396
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+ AA G
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150
Query: 397 FEAGISKNGQTREHALLAFXLGV--KQLIVXVNKMD 498
QTREH LLA +GV ++V +NK+D
Sbjct: 151 MP-------QTREHLLLARQVGVPLDNIVVFMNKVD 179
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 87.8 bits (208), Expect = 4e-18
Identities = 57/156 (36%), Positives = 81/156 (51%), Gaps = 2/156 (1%)
Frame = +1
Query: 37 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 216
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 217 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIXAAGTGE 396
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+ AA G
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150
Query: 397 FEAGISKNGQTREHALLAFXLGV--KQLIVXVNKMD 498
QTREH LLA +GV ++V +NK+D
Sbjct: 151 MP-------QTREHLLLARQVGVPLDNIVVFMNKVD 179
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 58.4 bits (135), Expect = 3e-09
Identities = 46/148 (31%), Positives = 66/148 (44%)
Frame = +1
Query: 55 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 234
N ++ HVD GKST L+ CG + +K+ +LDKL+ ERE
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPG-----QKQ-------------MLDKLQVERE 85
Query: 235 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIXAAGTGEFEAGIS 414
RGIT+ Y + +ID PGH DF + + D +L+ AA G
Sbjct: 86 RGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG------- 138
Query: 415 KNGQTREHALLAFXLGVKQLIVXVNKMD 498
QT + LAF + Q+I +NK+D
Sbjct: 139 VQAQTIANFWLAFEKNI-QIIPVINKID 165
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 55.6 bits (128), Expect = 2e-08
Identities = 47/148 (31%), Positives = 64/148 (43%)
Frame = +1
Query: 55 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 234
NI + H+DSGK+T T ++Y G ID E+ +G +D + ER+
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRIDSM---------HEV-RGKDDVGATMDFMDLERQ 95
Query: 235 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIXAAGTGEFEAGIS 414
RGITI A + + IID PGH DF + D AVL+ G G G+
Sbjct: 96 RGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLV-LCGVG----GVQ 150
Query: 415 KNGQTREHALLAFXLGVKQLIVXVNKMD 498
T L + + I VNKMD
Sbjct: 151 SQTFTVNRQLARYNV---PFICFVNKMD 175
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 55.2 bits (127), Expect = 3e-08
Identities = 36/90 (40%), Positives = 46/90 (51%)
Frame = +1
Query: 55 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 234
NI VI HVD+GK+T T L+Y G I A + KG+ V D L ERE
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAIHV---------AGHVDKGNT----VTDFLDIERE 73
Query: 235 RGITIDIALWKFETSKYYVTIIDAPGHRDF 324
RGIT+ A + + + +ID PGH DF
Sbjct: 74 RGITVQSAAVNLDWKGHRINLIDTPGHVDF 103
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 41.5 bits (93), Expect(2) = 3e-05
Identities = 37/108 (34%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
Frame = +1
Query: 178 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQ 354
GK + A ++ A GIT I + E +K VT +D PGH F G
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227
Query: 355 ADCAVLIXAAGTGEFEAGISKNGQTREHALLAFXLGVKQLIVXVNKMD 498
AD VL+ AA G E QT + A V QL+V VNK+D
Sbjct: 228 ADIVVLVVAADDGVKE-------QTAQSIKFAKDANV-QLVVAVNKID 267
Score = 23.0 bits (47), Expect(2) = 3e-05
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +1
Query: 58 IVVIGHVDSGKST 96
+ ++GHVD GK+T
Sbjct: 159 VTIMGHVDHGKTT 171
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 43.2 bits (97), Expect = 1e-04
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 13/134 (9%)
Frame = +1
Query: 31 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGK 183
M +++ N+ VI HVD GKST T L+ K G I K +F K+ QE +
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKS 72
Query: 184 GSFKYAWVLDKLKAERERG----ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 351
+ + L+K E +G T+++ K + + + + +ID+PGH DF +
Sbjct: 73 TAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALG 132
Query: 352 QADCAVLIXAAGTG 393
D A+++ +G
Sbjct: 133 VTDGALVVVDCVSG 146
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 42.7 bits (96), Expect = 1e-04
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 13/134 (9%)
Frame = +1
Query: 31 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGK 183
M +++ N+ VI HVD GKST T L+ K G I K +F K+ QE +
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKS 72
Query: 184 GSFKYAWVLDKLKAERERG----ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 351
+ + L+K E +G T+++ K + + + + +ID+PGH DF +
Sbjct: 73 TAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALR 132
Query: 352 QADCAVLIXAAGTG 393
D A+++ +G
Sbjct: 133 VTDGALVVVDCVSG 146
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 40.3 bits (90), Expect = 8e-04
Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 1/153 (0%)
Frame = +1
Query: 52 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 231
+N+ ++GHVDSGK+T T + E+G S A
Sbjct: 14 LNLGILGHVDSGKTTLT-------------------RRIAELGSTSAFDAHATSTTTDGI 54
Query: 232 ERGITIDIALWKFET-SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIXAAGTGEFEAG 408
R T+D+ + S + +ID PGH I+ ++ ++ D A++I + AG
Sbjct: 55 RRN-TLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAG 108
Query: 409 ISKNGQTREHALLAFXLGVKQLIVXVNKMDSTE 507
I QT EH LLA ++I+ +NK D E
Sbjct: 109 IQP--QTAEHLLLASKFCPNRVIIVLNKCDLAE 139
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 37.9 bits (84), Expect = 0.004
Identities = 50/175 (28%), Positives = 73/175 (41%), Gaps = 11/175 (6%)
Frame = +1
Query: 7 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKC---GGIDKRTIEKFEKEAQEM 177
++IRD P K+ + V+G+VD+GKST G L + G RT K E
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTHSALDDGRGAARTKLFRHKHEFES 185
Query: 178 GKGSFKYAWVL------DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMI 339
G+ S +L + + +D + +K VT ID GH ++K I
Sbjct: 186 GRTSSVGNDILGFDVHGNIVNKPDPHNHNLDWVQIGSDCAK-LVTFIDLAGHEKYLKTTI 244
Query: 340 TGTS--QADCAVLIXAAGTGEFEAGISKNGQTREHALLAFXLGVKQLIVXVNKMD 498
G + D +L+ A G G T+EH LA L V +V V K+D
Sbjct: 245 FGMTGHMPDYTMLMIGANMGII-------GTTKEHLSLALSLHVPVYLV-VTKID 291
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 37.5 bits (83), Expect = 0.006
Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 1/114 (0%)
Frame = +1
Query: 37 KEKTHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 213
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59
Query: 214 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 375
+ E+ RGIT+ + + +ID+PGH DF + + +D A+L+
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLL 113
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 37.5 bits (83), Expect = 0.006
Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 1/114 (0%)
Frame = +1
Query: 37 KEKTHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 213
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59
Query: 214 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 375
+ E+ RGIT+ + + +ID+PGH DF + + +D A+L+
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLL 113
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 33.9 bits (74), Expect = 0.069
Identities = 49/176 (27%), Positives = 73/176 (41%), Gaps = 12/176 (6%)
Frame = +1
Query: 7 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKC---GGIDKRTIEKFEKEAQEM 177
++IRD P K+ + V+G+VD+GKST G L + G RT K E
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTHSALDDGRGAARTKLFRHKHEFES 185
Query: 178 GKGSFKYAWVL------DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMI 339
G+ S +L + + +D + +K VT ID GH ++K I
Sbjct: 186 GRTSSVGNDILGFDVHGNIVNKPDPHNHNLDWVQIGSDCAK-LVTFIDLAGHEIYLKTTI 244
Query: 340 TGTSQ---ADCAVLIXAAGTGEFEAGISKNGQTREHALLAFXLGVKQLIVXVNKMD 498
G + + +L+ A G G T+EH LA L V +V V K+D
Sbjct: 245 FGMHRPYARNYTMLMIGANMGII-------GTTKEHLSLALSLHVPVYLV-VTKID 292
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 33.1 bits (72), Expect = 0.12
Identities = 19/71 (26%), Positives = 31/71 (43%)
Frame = +1
Query: 286 YVTIIDAPGHRDFIKNMITGTSQADCAVLIXAAGTGEFEAGISKNGQTREHALLAFXLGV 465
+V+ +D PGH + M+ G + D A L+ A QT EH + +
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQL 181
Query: 466 KQLIVXVNKMD 498
L++ NK+D
Sbjct: 182 NHLMILQNKVD 192
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 32.3 bits (70), Expect = 0.21
Identities = 27/113 (23%), Positives = 46/113 (40%)
Frame = +1
Query: 55 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 234
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 134 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 184
Query: 235 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIXAAGTG 393
+ + I + Y + IID PGH +F M AD V++ A G
Sbjct: 185 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 32.3 bits (70), Expect = 0.21
Identities = 27/113 (23%), Positives = 46/113 (40%)
Frame = +1
Query: 55 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 234
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 9 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 59
Query: 235 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIXAAGTG 393
+ + I + Y + IID PGH +F M AD V++ A G
Sbjct: 60 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 31.9 bits (69), Expect = 0.28
Identities = 49/173 (28%), Positives = 74/173 (42%), Gaps = 8/173 (4%)
Frame = +1
Query: 4 QFVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKC--GGIDKRTIEKFEKEAQEM 177
+ ++R P+ ++ + + V+G D GKST G L C G K I F + E+
Sbjct: 154 EVLVRKVPE-SQQFIEVRLAVVGGCDVGKSTLCGVLTQGCLDDGNGKARIGIF-RFPHEV 211
Query: 178 GKGSFKYAWVLDKLKAERERGITIDIALWKF----ETSKYYVTIIDAPGHRDFIKNMITG 345
G K + V + + RG ++ A E S VT+ID G + K I G
Sbjct: 212 RTG--KTSSVCNDVIGFDNRGKLVNYAQNSLEEMVEKSSKLVTLIDLAGDAKYQKTTIHG 269
Query: 346 TS--QADCAVLIXAAGTGEFEAGISKNGQTREHALLAFXLGVKQLIVXVNKMD 498
+ A L+ AA + GI+ TREH L L + + V + KMD
Sbjct: 270 LTGYTPHFACLVVAA-----DRGIT--WATREHLGLIAALNI-PMFVLITKMD 314
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 133 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 234
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 133 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 234
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical
protein F14D2.15 protein.
Length = 299
Score = 29.5 bits (63), Expect = 1.5
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Frame = -1
Query: 474 ELFDTEGESEQGMLXGLTVLRDTSFEF-----TGTGSXDEHSAISLRGSCDH--VLDEIS 316
E + +E E G+ L V RD F + +GTGS + H ++R DH + +
Sbjct: 24 EHYTSEEEDHFGIKWWLRVTRDDQFLYVDLGKSGTGSTNFHGNFNVRVESDHGVISENFK 83
Query: 315 VSRSINDGNIVLASFELPESNIDCDTTLTLSL*FVQYPSI 196
S S +D E+P ++ C++ +L + +Y SI
Sbjct: 84 FSGSKSDA-------EIPSTSNRCESFKWSNLDYSKYLSI 116
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 2.6
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 52 INIVVIGHVDSGKSTTT 102
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 28.7 bits (61), Expect = 2.6
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -2
Query: 491 LFTXTMSCLTPRXKASKACSRV*PFLEIPASNSPVPAAXMSTA 363
LF T+SC+ + AS S P + PA N VP A +S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 295 IIDAPGHRDFIKNMITGTSQADCAVLI 375
IID PGH F G+S D A+L+
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILV 579
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 4.6
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +1
Query: 289 VTIIDAPGHRDFI--KNMITGTSQADCAVLIXAA 384
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,244,267
Number of Sequences: 27780
Number of extensions: 219386
Number of successful extensions: 642
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 628
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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