Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32410
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    60   1e-11
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    51   8e-09
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                36   2e-04
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    25   0.35 
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    23   2.5  

>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 60.5 bits (140), Expect = 1e-11
 Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
 Frame = +2

Query: 71  YKAPEIINDEPAYPQTDIWSIGVLAYILLSGVSPFRGNDDNETKQNISFVRYRF-EHLYS 247
           Y +PE++  EP     DIW+ GV+ YILL G  PF   D +     I    Y +    + 
Sbjct: 78  YLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKTGSYDYPSPEWD 137

Query: 248 EITQEATRFLMFVFKKVPLKRPTAEECHEHRWLAQSDFIS 367
            +T EA   +  +    P KR TA E  +H W+ Q + ++
Sbjct: 138 TVTPEAKNLINQMLTVNPSKRITASEALKHPWICQRERVA 177


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 50.8 bits (116), Expect = 8e-09
 Identities = 37/119 (31%), Positives = 54/119 (45%), Gaps = 5/119 (4%)
 Frame = +2

Query: 2   VDFGSAHKVTKLGTSVPQVGHLEYKAPEIINDEPAYPQTDIWSIGVLAYILLSGVSPFRG 181
           VDFG A ++     +    G  EY APE+I ++      D WS+GVL + LL+G  PF G
Sbjct: 508 VDFGFAKRLDHGRKTWTFCGTPEYVAPEVILNKGHDISADYWSLGVLMFELLTGTPPFTG 567

Query: 182 NDDNETKQNISFVRYRFEHLYSEITQEATRFLMFVFKKVPLKR-----PTAEECHEHRW 343
            D  +T  NI             IT+ AT  +  + +  P +R         E  +H+W
Sbjct: 568 GDPMKT-YNIILKGIDAIEFPRSITRNATALIKKLCRDNPAERLGYQKGGISEIQKHKW 625


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 36.3 bits (80), Expect = 2e-04
 Identities = 20/59 (33%), Positives = 29/59 (49%)
 Frame = +2

Query: 5   DFGSAHKVTKLGTSVPQVGHLEYKAPEIINDEPAYPQTDIWSIGVLAYILLSGVSPFRG 181
           DFGS+  +          G   Y APE+I      P  DI+S+G++A+ +L    PF G
Sbjct: 198 DFGSSVLIGAPNEIDKFYGTPGYTAPEVIKQNRPTPAADIYSLGIVAWQMLFRKLPFAG 256


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 25.4 bits (53), Expect = 0.35
 Identities = 11/38 (28%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +2

Query: 65  LEYKAPEIINDEPAYPQTDIWSIGVLAYILLS-GVSPF 175
           + + APE I        +D+WS+G++ + ++S G  P+
Sbjct: 802 VRWTAPEAIAFRKFTSASDVWSMGIVCWEVMSYGERPY 839


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 14/51 (27%), Positives = 25/51 (49%)
 Frame = -3

Query: 376  SLLADEVRLR*PTVLVALLGRRTLQGNLLEDEHQESGRLLRDLAVQMLESV 224
            +LLA +++L  P  + +LL    LQG  +  +   S    + +  Q L+ V
Sbjct: 1019 TLLASQIKLVSPGQIKSLLTGHGLQGQTIFIKQSPSSNQSQQIQQQQLKRV 1069


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,190
Number of Sequences: 438
Number of extensions: 3041
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)