Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32409
(322 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68338-1|CAA92757.1| 134|Caenorhabditis elegans Hypothetical pr... 109 6e-25
AF022979-10|AAB69905.3| 651|Caenorhabditis elegans Nematode ast... 28 1.7
Z71186-8|CAA94917.2| 1322|Caenorhabditis elegans Hypothetical pr... 26 5.3
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 26 5.3
Z81458-4|CAB03824.1| 623|Caenorhabditis elegans Hypothetical pr... 26 7.0
Z98877-6|CAD56617.1| 432|Caenorhabditis elegans Hypothetical pr... 25 9.2
Z98877-3|CAB54472.2| 537|Caenorhabditis elegans Hypothetical pr... 25 9.2
Z68003-1|CAA91975.1| 664|Caenorhabditis elegans Hypothetical pr... 25 9.2
U76403-1|AAB39735.1| 664|Caenorhabditis elegans degenerin protein. 25 9.2
U50069-4|AAB37557.1| 355|Caenorhabditis elegans Hypothetical pr... 25 9.2
>Z68338-1|CAA92757.1| 134|Caenorhabditis elegans Hypothetical
protein T24B8.1 protein.
Length = 134
Score = 109 bits (261), Expect = 6e-25
Identities = 49/80 (61%), Positives = 68/80 (85%)
Frame = +2
Query: 2 PNIGYGSNKKTRHMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERA 181
P IG+GS+++TR +LPNG++KVLV NVK+L++L+MQ+ KY EI HGVS+K RK IVERA
Sbjct: 55 PTIGHGSDRRTRFVLPNGYKKVLVQNVKDLDMLLMQSYKYIGEIGHGVSAKSRKGIVERA 114
Query: 182 QQLSIRVTNAAARLRSQENE 241
QL+I++TN ARLR++E+E
Sbjct: 115 AQLNIKLTNGNARLRTEESE 134
>AF022979-10|AAB69905.3| 651|Caenorhabditis elegans Nematode
astacin protease protein32 protein.
Length = 651
Score = 27.9 bits (59), Expect = 1.7
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = -1
Query: 229 GAEASGRIRHSDAELLGSFHDQLPLLRRDTVSDLCAVLPVLHHQDF 92
G E +G H A LG FH Q+ R D V+ +P Q+F
Sbjct: 282 GCEVTGTAAHEIAHTLGLFHTQMRSDRDDYVTIDLTDVPESSQQNF 327
>Z71186-8|CAA94917.2| 1322|Caenorhabditis elegans Hypothetical protein
F23D12.2 protein.
Length = 1322
Score = 26.2 bits (55), Expect = 5.3
Identities = 21/63 (33%), Positives = 33/63 (52%)
Frame = +2
Query: 47 PNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 226
P+ RK+LV NVK L ++ +Y A + + R+ A+QLSI ++ A+R
Sbjct: 1097 PSSTRKILVSNVK-LPAILQSKDEYIA--SQKLMQDLREKTQNLAKQLSI-ISAQASRKS 1152
Query: 227 SQE 235
S E
Sbjct: 1153 SDE 1155
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 26.2 bits (55), Expect = 5.3
Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Frame = +1
Query: 178 SPAAQHQSDECGRSP-PLPGERINIIVLXXXXXXNSRGGPVPNSPYSES 321
+P+ S G SP P P E N +L + GP PN P + S
Sbjct: 1385 NPSVPESSTGGGPSPGPSPNEPSNPSILGPSTGGDPSPGPSPNEPSNPS 1433
>Z81458-4|CAB03824.1| 623|Caenorhabditis elegans Hypothetical
protein C03E10.5 protein.
Length = 623
Score = 25.8 bits (54), Expect = 7.0
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 9 LVTVPTRRPVICSQMDSVRS*FT 77
LVT+ +R VIC Q DS S T
Sbjct: 517 LVTIALKRKVICLQTDSTESCIT 539
>Z98877-6|CAD56617.1| 432|Caenorhabditis elegans Hypothetical
protein Y69H2.3d protein.
Length = 432
Score = 25.4 bits (53), Expect = 9.2
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -3
Query: 77 CELGPYGIHLGAYDGSSCWNRNQC 6
CEL P IH+ A +SC +QC
Sbjct: 317 CELMPMCIHVNACASTSCLVGSQC 340
>Z98877-3|CAB54472.2| 537|Caenorhabditis elegans Hypothetical
protein Y69H2.3a protein.
Length = 537
Score = 25.4 bits (53), Expect = 9.2
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -3
Query: 77 CELGPYGIHLGAYDGSSCWNRNQC 6
CEL P IH+ A +SC +QC
Sbjct: 422 CELMPMCIHVNACASTSCLVGSQC 445
>Z68003-1|CAA91975.1| 664|Caenorhabditis elegans Hypothetical
protein E02H4.1 protein.
Length = 664
Score = 25.4 bits (53), Expect = 9.2
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = -3
Query: 203 SL*C*AAGLFPRSASASSKRHRERSLRSTSCFASSRFPAL*HCELGPYGIHL 48
SL C ++ S +E+ + F S+ FPA+ C L P+ HL
Sbjct: 74 SLVCICLCMYSFSHVKDKYDRKEKIVNVELVFESAPFPAITVCNLNPFKNHL 125
>U76403-1|AAB39735.1| 664|Caenorhabditis elegans degenerin protein.
Length = 664
Score = 25.4 bits (53), Expect = 9.2
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = -3
Query: 203 SL*C*AAGLFPRSASASSKRHRERSLRSTSCFASSRFPAL*HCELGPYGIHL 48
SL C ++ S +E+ + F S+ FPA+ C L P+ HL
Sbjct: 74 SLVCICLCMYSFSHVKDKYDRKEKIVNVELVFESAPFPAITVCNLNPFKNHL 125
>U50069-4|AAB37557.1| 355|Caenorhabditis elegans Hypothetical
protein C09B9.1 protein.
Length = 355
Score = 25.4 bits (53), Expect = 9.2
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1
Query: 208 CGRSPPLPGERINI 249
CGR LPG+RIN+
Sbjct: 151 CGRIATLPGDRINV 164
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,489,010
Number of Sequences: 27780
Number of extensions: 137081
Number of successful extensions: 370
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 370
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 376873630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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