Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32390
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68752-6|CAD27607.1| 322|Caenorhabditis elegans Hypothetical pr... 100 7e-22
AY038065-1|AAK72094.1| 322|Caenorhabditis elegans beta 1,3-gala... 100 7e-22
Z81492-7|CAB04032.1| 384|Caenorhabditis elegans Hypothetical pr... 51 4e-07
Z83102-8|CAB05465.3| 325|Caenorhabditis elegans Hypothetical pr... 51 6e-07
Z71178-12|CAD44086.1| 342|Caenorhabditis elegans Hypothetical p... 48 5e-06
AY241927-1|AAO85276.1| 330|Caenorhabditis elegans beta-1,3-gala... 48 5e-06
AC024746-16|AAF60408.1| 330|Caenorhabditis elegans Squashed vul... 48 5e-06
AL009246-5|CAA15839.1| 357|Caenorhabditis elegans Hypothetical ... 47 9e-06
Z79605-8|CAE18060.2| 340|Caenorhabditis elegans Hypothetical pr... 40 0.001
AL034489-11|CAL49453.1| 340|Caenorhabditis elegans Hypothetical... 40 0.001
AY533304-1|AAS21306.1| 359|Caenorhabditis elegans BRE-2 protein. 39 0.002
AL009246-4|CAA15838.2| 368|Caenorhabditis elegans Hypothetical ... 38 0.003
AC006672-1|AAK84544.1| 305|Caenorhabditis elegans Hypothetical ... 38 0.006
Z83125-4|CAB05616.1| 376|Caenorhabditis elegans Hypothetical pr... 36 0.013
Z81502-4|CAB04107.2| 357|Caenorhabditis elegans Hypothetical pr... 34 0.052
Z81553-1|CAB04490.2| 327|Caenorhabditis elegans Hypothetical pr... 33 0.12
Z81492-10|CAB04029.2| 322|Caenorhabditis elegans Hypothetical p... 33 0.12
Z81553-13|CAB04502.1| 345|Caenorhabditis elegans Hypothetical p... 32 0.21
AL009246-8|CAA15841.1| 345|Caenorhabditis elegans Hypothetical ... 32 0.21
Z74475-3|CAA98957.2| 567|Caenorhabditis elegans Hypothetical pr... 30 0.85
Z70686-2|CAA94610.1| 570|Caenorhabditis elegans Hypothetical pr... 30 0.85
U20142-2|AAB60235.1| 570|Caenorhabditis elegans SPE-26 protein ... 30 0.85
U27312-10|AAA68253.1| 231|Caenorhabditis elegans Hypothetical p... 30 1.1
AL132943-5|CAB81977.1| 367|Caenorhabditis elegans Hypothetical ... 29 1.5
AL110487-12|CAB54430.2| 308|Caenorhabditis elegans Hypothetical... 29 2.0
U64858-7|AAB18285.2| 340|Caenorhabditis elegans Hypothetical pr... 28 3.4
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 28 4.6
U67955-3|AAO91745.1| 655|Caenorhabditis elegans Hypothetical pr... 28 4.6
U67955-2|AAB07583.2| 791|Caenorhabditis elegans Hypothetical pr... 28 4.6
AF039040-4|AAB94182.1| 368|Caenorhabditis elegans Hypothetical ... 28 4.6
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 28 4.6
Z81147-11|CAL69739.1| 323|Caenorhabditis elegans Hypothetical p... 27 6.0
Z35641-2|CAA84707.2| 389|Caenorhabditis elegans Hypothetical pr... 27 8.0
U21323-10|AAW30670.1| 805|Caenorhabditis elegans Hypothetical p... 27 8.0
U21323-9|AAA62553.1| 971|Caenorhabditis elegans Hypothetical pr... 27 8.0
AF269063-1|AAG36940.1| 389|Caenorhabditis elegans core1 UDP-gal... 27 8.0
>Z68752-6|CAD27607.1| 322|Caenorhabditis elegans Hypothetical
protein T12G3.8 protein.
Length = 322
Score = 100 bits (239), Expect = 7e-22
Identities = 50/165 (30%), Positives = 91/165 (55%), Gaps = 3/165 (1%)
Frame = +1
Query: 1 NNTIKTVMSFRWIFQ--HCAEAQHYLFTDDDMYISVQNLLKYVSDVTTASERDGILFAGY 174
NNT+K + + C+ DDD + + NL+K+ +++ +++ G+
Sbjct: 150 NNTLKLFGAIDYAANPNQCSSPDFTFLVDDDYLVHIPNLVKFAK----TKQKEELVYEGF 205
Query: 175 VFKSAPQRFRSSKWRVSLEEYPWDKWPPYVTAGAYVVSNKAMKMLYVGSLFVKHFRFDDI 354
VF ++P R + K +SL EYP+ ++PPYV+AGA ++++ + +K F FDD+
Sbjct: 206 VFDTSPFRLKIHKHSISLNEYPFSRYPPYVSAGAVFLTSETIARFRNSIRKLKMFPFDDV 265
Query: 355 YLGIVAKKMGIVPTHCPHFHFYKKPYEREVYSD-VIASHGYSNHD 486
+ GI+AK + + TH +F F+ + ++ + D VIA HGY+ D
Sbjct: 266 FTGILAKTVNVAATHNENFIFWCRRVSQKEWDDGVIAVHGYARKD 310
>AY038065-1|AAK72094.1| 322|Caenorhabditis elegans beta
1,3-galactosyltransferaseBRE-5 protein.
Length = 322
Score = 100 bits (239), Expect = 7e-22
Identities = 50/165 (30%), Positives = 91/165 (55%), Gaps = 3/165 (1%)
Frame = +1
Query: 1 NNTIKTVMSFRWIFQ--HCAEAQHYLFTDDDMYISVQNLLKYVSDVTTASERDGILFAGY 174
NNT+K + + C+ DDD + + NL+K+ +++ +++ G+
Sbjct: 150 NNTLKLFGAIDYAANPNQCSSPDFTFLVDDDYLVHIPNLVKFAK----TKQKEELVYEGF 205
Query: 175 VFKSAPQRFRSSKWRVSLEEYPWDKWPPYVTAGAYVVSNKAMKMLYVGSLFVKHFRFDDI 354
VF ++P R + K +SL EYP+ ++PPYV+AGA ++++ + +K F FDD+
Sbjct: 206 VFDTSPFRLKIHKHSISLNEYPFSRYPPYVSAGAVFLTSETIARFRNSIRKLKMFPFDDV 265
Query: 355 YLGIVAKKMGIVPTHCPHFHFYKKPYEREVYSD-VIASHGYSNHD 486
+ GI+AK + + TH +F F+ + ++ + D VIA HGY+ D
Sbjct: 266 FTGILAKTVNVAATHNENFIFWCRRVSQKEWDDGVIAVHGYARKD 310
>Z81492-7|CAB04032.1| 384|Caenorhabditis elegans Hypothetical
protein E03H4.11 protein.
Length = 384
Score = 51.2 bits (117), Expect = 4e-07
Identities = 34/126 (26%), Positives = 61/126 (48%), Gaps = 9/126 (7%)
Frame = +1
Query: 118 YVSDVTTASERDGILFA------GYVFKSAPQRFR--SSKWRVSLEEYPWDKWPPYVTAG 273
+ D TA GI+ A GY ++ + FR + +W V Y K+P YV+
Sbjct: 223 FFPDKLTALYEQGIIDATPLCAYGYKIQAGARIFRDKNDRWYVPESSYSCSKFPEYVSGM 282
Query: 274 AYVVSNKAMKMLYVGSLFVKHFRFDDIYL-GIVAKKMGIVPTHCPHFHFYKKPYEREVYS 450
Y+V+ +A + + + + + +D++L GI+A+ +GI + P F+ Y +
Sbjct: 283 LYMVTWEAAQQIIKSTKYRDFIQVEDVFLTGILAEDLGISVRNLPKFYKYPNDIDESKSV 342
Query: 451 DVIASH 468
D+IA H
Sbjct: 343 DIIAWH 348
>Z83102-8|CAB05465.3| 325|Caenorhabditis elegans Hypothetical
protein C54C8.3 protein.
Length = 325
Score = 50.8 bits (116), Expect = 6e-07
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Frame = +1
Query: 196 RFRSSKWRVSLEEYPWDKWPPYVTAGAYVVSNKAMKMLYVGSLFVKHFRFDDIYL-GIVA 372
R ++ +W V Y K+P YV+ Y+V+ +A + + + + + +D++L GI+A
Sbjct: 218 RDKTHRWYVPESSYSCSKFPEYVSGMLYMVTWEAAQQIIKSTKYRDFIQVEDVFLTGILA 277
Query: 373 KKMGIVPTHCPHFHFYKKPYEREVYSDVIASH 468
+ +GI + P F+ Y E DVIA H
Sbjct: 278 EDLGISVKNLPEFYKYPSDIEESNPGDVIAWH 309
>Z71178-12|CAD44086.1| 342|Caenorhabditis elegans Hypothetical
protein B0024.15 protein.
Length = 342
Score = 47.6 bits (108), Expect = 5e-06
Identities = 33/128 (25%), Positives = 62/128 (48%), Gaps = 2/128 (1%)
Frame = +1
Query: 10 IKTVMSFRWIFQHCAEAQHYLFTDDDMYISVQNLLKYVSDVTTASERDGILFAGYVFKSA 189
+ ++S++ HC A L DDDM + + L + + D AS +GI +G ++K++
Sbjct: 164 VHAILSYKQ--SHCQLADFQLKIDDDMAVDMDGLYRSLEDKKQASI-NGI--SGIIWKNS 218
Query: 190 PQ-RFRSSKWRVSLEEYPWDKWPPYVTAGAYVVSNKAM-KMLYVGSLFVKHFRFDDIYLG 363
P R + +W V Y +PPY+ Y++ A+ +ML + + D + G
Sbjct: 219 PPVREKKHRWYVPKTLYSEKFFPPYIDGPIYLIGKNAVPRMLEEAKNYNQWIIEDVFWTG 278
Query: 364 IVAKKMGI 387
++ K + I
Sbjct: 279 VIGKALKI 286
>AY241927-1|AAO85276.1| 330|Caenorhabditis elegans
beta-1,3-galactosyltransferase protein.
Length = 330
Score = 47.6 bits (108), Expect = 5e-06
Identities = 33/133 (24%), Positives = 66/133 (49%)
Frame = +1
Query: 13 KTVMSFRWIFQHCAEAQHYLFTDDDMYISVQNLLKYVSDVTTASERDGILFAGYVFKSAP 192
KT+ F F + + + +L TD D ++ + L+ + + +D +L+ G++ A
Sbjct: 137 KTLACFVHAFANF-KFKFFLKTDIDSFVRITPLIINLKQI-----QDPMLYWGFLDGRA- 189
Query: 193 QRFRSSKWRVSLEEYPWDKWPPYVTAGAYVVSNKAMKMLYVGSLFVKHFRFDDIYLGIVA 372
+ FR KW+ E D++ PY G YV+S + ++ L + + +H+R +D+ +G
Sbjct: 190 KPFRKGKWKEP-EWNLCDRYLPYQLGGGYVLSYELIRFLAINAQLFRHYRNEDVSVGAWI 248
Query: 373 KKMGIVPTHCPHF 411
+ + H P F
Sbjct: 249 GGLDVKYVHDPRF 261
>AC024746-16|AAF60408.1| 330|Caenorhabditis elegans Squashed vulva
protein 2 protein.
Length = 330
Score = 47.6 bits (108), Expect = 5e-06
Identities = 33/133 (24%), Positives = 66/133 (49%)
Frame = +1
Query: 13 KTVMSFRWIFQHCAEAQHYLFTDDDMYISVQNLLKYVSDVTTASERDGILFAGYVFKSAP 192
KT+ F F + + + +L TD D ++ + L+ + + +D +L+ G++ A
Sbjct: 137 KTLACFVHAFANF-KFKFFLKTDIDSFVRITPLIINLKQI-----QDPMLYWGFLDGRA- 189
Query: 193 QRFRSSKWRVSLEEYPWDKWPPYVTAGAYVVSNKAMKMLYVGSLFVKHFRFDDIYLGIVA 372
+ FR KW+ E D++ PY G YV+S + ++ L + + +H+R +D+ +G
Sbjct: 190 KPFRKGKWKEP-EWNLCDRYLPYQLGGGYVLSYELIRFLAINAQLFRHYRNEDVSVGAWI 248
Query: 373 KKMGIVPTHCPHF 411
+ + H P F
Sbjct: 249 GGLDVKYVHDPRF 261
>AL009246-5|CAA15839.1| 357|Caenorhabditis elegans Hypothetical
protein C47F8.6 protein.
Length = 357
Score = 46.8 bits (106), Expect = 9e-06
Identities = 24/97 (24%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Frame = +1
Query: 196 RFRSSKWRVSLEEYPWDKWPPYVTAGAYVVSNKAMKMLYVGSLFVKHFRFDDIYL-GIVA 372
R ++++W V Y ++P Y++ Y+ + +A +ML + + +D+ L GI+A
Sbjct: 233 RDKTNRWYVPESAYSCSQYPAYLSGMYYMATREAAQMLLKSTKHRDFIQVEDVLLTGILA 292
Query: 373 KKMGIVPTHCPHFHFYKKPYEREVYSDVIASHGYSNH 483
+ +GI P + + ++ D+IA H Y N+
Sbjct: 293 EDLGIPIRDMPKLYKFPHDIKKNDNKDIIAWHNYKNN 329
>Z79605-8|CAE18060.2| 340|Caenorhabditis elegans Hypothetical
protein ZK678.8 protein.
Length = 340
Score = 39.9 bits (89), Expect = 0.001
Identities = 27/114 (23%), Positives = 51/114 (44%), Gaps = 2/114 (1%)
Frame = +1
Query: 148 RDGILFAGYVFKSAPQRFRS-SKWRVSLEEYPWDKWPPYVTAGAYVVSNKAMKMLYVGSL 324
+ G + G V + P+ F W V E YP +P +V ++V+S K+L
Sbjct: 218 KKGPVMLGKVSRGYPRIFLPWLTWHVPSEMYPNLCYPLFVQGSSFVLSKDGAKLLVENVC 277
Query: 325 FVKHFRFDDIYLGIVAKKMGIVPTHCPHFHFYKKPYEREVYSDVIASH-GYSNH 483
V DD+++G+++ +G+ H + +++ + D + H YS H
Sbjct: 278 KVPMVHLDDVFMGVLSNCVGLGLIH-------NEGFDKHSFDDFVVYHYQYSRH 324
>AL034489-11|CAL49453.1| 340|Caenorhabditis elegans Hypothetical
protein ZK678.8 protein.
Length = 340
Score = 39.9 bits (89), Expect = 0.001
Identities = 27/114 (23%), Positives = 51/114 (44%), Gaps = 2/114 (1%)
Frame = +1
Query: 148 RDGILFAGYVFKSAPQRFRS-SKWRVSLEEYPWDKWPPYVTAGAYVVSNKAMKMLYVGSL 324
+ G + G V + P+ F W V E YP +P +V ++V+S K+L
Sbjct: 218 KKGPVMLGKVSRGYPRIFLPWLTWHVPSEMYPNLCYPLFVQGSSFVLSKDGAKLLVENVC 277
Query: 325 FVKHFRFDDIYLGIVAKKMGIVPTHCPHFHFYKKPYEREVYSDVIASH-GYSNH 483
V DD+++G+++ +G+ H + +++ + D + H YS H
Sbjct: 278 KVPMVHLDDVFMGVLSNCVGLGLIH-------NEGFDKHSFDDFVVYHYQYSRH 324
>AY533304-1|AAS21306.1| 359|Caenorhabditis elegans BRE-2 protein.
Length = 359
Score = 38.7 bits (86), Expect = 0.002
Identities = 31/147 (21%), Positives = 63/147 (42%), Gaps = 5/147 (3%)
Frame = +1
Query: 79 DDDMYISVQNLLKYVSDVTTASERDGILFAGYVFKSAPQRFR-SSKWRVSLEEYPWDKWP 255
D+D+ L ++D T + I Y A ++KW++S + +P
Sbjct: 189 DEDVLFYPDQLTPLINDKTINTSTFSIYGEKYEAGVAVNHGEDNAKWQISKNSFKCSVYP 248
Query: 256 PYVTAGAYVVSNKAMKMLYVGSLFVKHFRFD--DIYL-GIVAKKMGIVPTHCPHFHFYKK 426
Y++ Y ++ KA K + + K D D+++ G++A +GI P + ++
Sbjct: 249 SYLSGPTYFLTRKAAKRIVEATKHRKFISVDVEDVFITGLLAGDVGIKKNQLPFMYMIEE 308
Query: 427 -PYEREVYSDVIASHGYSNHDELIRVW 504
+RE Y +++A H + I +
Sbjct: 309 ATNDRESY-EILAWHTKKRDQQYIEAF 334
>AL009246-4|CAA15838.2| 368|Caenorhabditis elegans Hypothetical
protein C47F8.5 protein.
Length = 368
Score = 38.3 bits (85), Expect = 0.003
Identities = 25/114 (21%), Positives = 48/114 (42%), Gaps = 3/114 (2%)
Frame = +1
Query: 151 DGILFAGYVFKSAPQ--RFRSSKWRVSLEEYPWDKWPPYVTAGAYVVSNKAMKMLYVGSL 324
D F G + K + + + W V Y +P YV Y+ + KA K++ +
Sbjct: 226 DAAAFYGQLLKEGEPVIKKKDAHWYVPDYAYNCTGYPAYVAGPFYLATRKAAKLVLKFTK 285
Query: 325 FVKHFRFDD-IYLGIVAKKMGIVPTHCPHFHFYKKPYEREVYSDVIASHGYSNH 483
F +D + GI+A +GI + H + + + +++A H + N+
Sbjct: 286 FQNFMTVEDSLITGILANDLGIPRKNLEHVYRHDYDIQDNEGKEILAWHSFKNN 339
>AC006672-1|AAK84544.1| 305|Caenorhabditis elegans Hypothetical
protein K08D12.5 protein.
Length = 305
Score = 37.5 bits (83), Expect = 0.006
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 9/84 (10%)
Frame = +1
Query: 205 SSKWRVSLEEYPWDKWPPYVTAGAYVVSNK---------AMKMLYVGSLFVKHFRFDDIY 357
++KW V Y +P Y + G YV++ K AM + SL + D I+
Sbjct: 172 TTKWAVPEFVYSEPVYPTYCSTGTYVLAGKTVPQSLIKEAMSSPFANSLNFRKLSEDVIF 231
Query: 358 LGIVAKKMGIVPTHCPHFHFYKKP 429
GI+A+K GI H F++ P
Sbjct: 232 TGILAEKAGIKRRHINGLSFFEIP 255
>Z83125-4|CAB05616.1| 376|Caenorhabditis elegans Hypothetical
protein T15D6.5 protein.
Length = 376
Score = 36.3 bits (80), Expect = 0.013
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +1
Query: 196 RFRSSKWRVSLEEYPWDKWPPYVTAGAYVVSNKAMKMLYVGSLFVKHFRFDD-IYLGIVA 372
R + W V Y K+P Y Y+++NKA ++ S F +D + GI+A
Sbjct: 268 RNETKPWYVPETAYNCTKYPVYALGPFYLITNKAANLIVENSRFQNFMTVEDALIAGIIA 327
Query: 373 KKMGI 387
+ +GI
Sbjct: 328 EGLGI 332
>Z81502-4|CAB04107.2| 357|Caenorhabditis elegans Hypothetical
protein F14B6.4 protein.
Length = 357
Score = 34.3 bits (75), Expect = 0.052
Identities = 31/117 (26%), Positives = 46/117 (39%), Gaps = 3/117 (2%)
Frame = +1
Query: 154 GILFA--GYVFKSAPQRFRSSKWRVSLEEYPWDKWPPYVTAGAYVVSNKAMKMLYVGSLF 327
G+LFA GYV++ R W V Y D +PPY Y+V+ A K + +
Sbjct: 220 GMLFAEGGYVYRDKEHR-----WFVPDSTYGCDMFPPYTGGLFYLVTQDAAKKILNATKH 274
Query: 328 VKHFRFDDIYL-GIVAKKMGIVPTHCPHFHFYKKPYEREVYSDVIASHGYSNHDELI 495
+D + GI+A I H P + E V+A H N + +
Sbjct: 275 RIFIPIEDALINGILANDCKIPRIHLPEIYGDHHSLTDEDTRGVLAWHTGKNDQQFL 331
>Z81553-1|CAB04490.2| 327|Caenorhabditis elegans Hypothetical
protein F56H6.1 protein.
Length = 327
Score = 33.1 bits (72), Expect = 0.12
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 13 KTVMSFRWIFQHCAEA-QHYLFTDDDMYISVQNLLKYVSDVTTASERDGILFAGYVFK 183
KT F + + H +++ YL DDD Y ++ +L +Y+S + L+ GYV K
Sbjct: 141 KTTFGFYYSYMHISKSFDWYLKADDDTYFAMDHLKEYLSTLDPTKP----LYLGYVLK 194
>Z81492-10|CAB04029.2| 322|Caenorhabditis elegans Hypothetical
protein E03H4.3 protein.
Length = 322
Score = 33.1 bits (72), Expect = 0.12
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +1
Query: 13 KTVMSFRWIFQHCAEA-QHYLFTDDDMYISVQNLLKYVSDVTTASERDGILFAGYVFKS 186
K++ F + + H + + YL DDD Y ++ +L +Y++ + + L+ GYV KS
Sbjct: 141 KSIFGFYYSYMHISNSFDWYLKADDDTYFAMDHLREYLNTLDPSKP----LYLGYVIKS 195
>Z81553-13|CAB04502.1| 345|Caenorhabditis elegans Hypothetical
protein C47F8.3 protein.
Length = 345
Score = 32.3 bits (70), Expect = 0.21
Identities = 23/98 (23%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Frame = +1
Query: 196 RFRSSKWRVSLEEYPWDKWPPYVTAGAYVVSNKAMKMLYVGSLFVKHFRFDD-IYLGIVA 372
R ++ W V Y +P YV Y+V+ A ++ + + +D + GI+A
Sbjct: 230 RNKTEPWYVPETAYNCTVYPVYVMGPIYLVTKDAASLILDNANHQQFMTVEDALITGIIA 289
Query: 373 KKMGIVPTHCPHFHFYKKPYEREVYSDVIASHGYSNHD 486
+K+GI P+ ++ DV+A H + +D
Sbjct: 290 QKLGIRRYSLPNVFRHRNDITEG--QDVLAWHVQTKND 325
>AL009246-8|CAA15841.1| 345|Caenorhabditis elegans Hypothetical
protein C47F8.3 protein.
Length = 345
Score = 32.3 bits (70), Expect = 0.21
Identities = 23/98 (23%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Frame = +1
Query: 196 RFRSSKWRVSLEEYPWDKWPPYVTAGAYVVSNKAMKMLYVGSLFVKHFRFDD-IYLGIVA 372
R ++ W V Y +P YV Y+V+ A ++ + + +D + GI+A
Sbjct: 230 RNKTEPWYVPETAYNCTVYPVYVMGPIYLVTKDAASLILDNANHQQFMTVEDALITGIIA 289
Query: 373 KKMGIVPTHCPHFHFYKKPYEREVYSDVIASHGYSNHD 486
+K+GI P+ ++ DV+A H + +D
Sbjct: 290 QKLGIRRYSLPNVFRHRNDITEG--QDVLAWHVQTKND 325
>Z74475-3|CAA98957.2| 567|Caenorhabditis elegans Hypothetical
protein R04F11.4 protein.
Length = 567
Score = 30.3 bits (65), Expect = 0.85
Identities = 15/60 (25%), Positives = 28/60 (46%)
Frame = +1
Query: 337 FRFDDIYLGIVAKKMGIVPTHCPHFHFYKKPYEREVYSDVIASHGYSNHDELIRVWNEQN 516
FR + G+V +G FH Y+KPYE+++ ++ G + + ++W N
Sbjct: 52 FRLALPHFGLVLLSIGYTLIGALCFHHYEKPYEQQLRNETSRRIGELKNRVMDQLWRMSN 111
>Z70686-2|CAA94610.1| 570|Caenorhabditis elegans Hypothetical
protein R10H10.2 protein.
Length = 570
Score = 30.3 bits (65), Expect = 0.85
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +1
Query: 151 DGILFAGYVFK-SAPQRFRSSKWRVSLEEYPWDKWPPYVTAGAYVVSNKAMKMLYVGSLF 327
DGIL Y+F S QR R W++S E + WD+ + Y +SN + ++Y G ++
Sbjct: 290 DGIL---YLFGGSTGQRTRCETWKLSTETWQWDRCNNMMEPRNY-ISNSS--VVYDGRIY 343
Query: 328 V 330
V
Sbjct: 344 V 344
>U20142-2|AAB60235.1| 570|Caenorhabditis elegans SPE-26 protein
protein.
Length = 570
Score = 30.3 bits (65), Expect = 0.85
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +1
Query: 151 DGILFAGYVFK-SAPQRFRSSKWRVSLEEYPWDKWPPYVTAGAYVVSNKAMKMLYVGSLF 327
DGIL Y+F S QR R W++S E + WD+ + Y +SN + ++Y G ++
Sbjct: 290 DGIL---YLFGGSTGQRTRCETWKLSTETWQWDRCNNMMEPRNY-ISNSS--VVYDGRIY 343
Query: 328 V 330
V
Sbjct: 344 V 344
>U27312-10|AAA68253.1| 231|Caenorhabditis elegans Hypothetical
protein F26A1.12 protein.
Length = 231
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -3
Query: 283 PRTPRPSRKAATCPRDTPPRTPATCSTG 200
PR PRP+R P PP TPA G
Sbjct: 48 PRPPRPNRPPRPPPATPPPTTPAPSCPG 75
>AL132943-5|CAB81977.1| 367|Caenorhabditis elegans Hypothetical
protein Y116F11B.8 protein.
Length = 367
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -3
Query: 274 PRPSRKAATC-PRDTPPRTPATCSTGTVAAP 185
P P+ +T P +TPP +P T S T +AP
Sbjct: 201 PPPTDPPSTLGPMETPPNSPGTSSAATTSAP 231
>AL110487-12|CAB54430.2| 308|Caenorhabditis elegans Hypothetical
protein Y39E4B.9 protein.
Length = 308
Score = 29.1 bits (62), Expect = 2.0
Identities = 20/90 (22%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
Frame = +1
Query: 79 DDDMYISVQNLLKYVSDVTTASERDGILFAGYVFKSAPQRFR-SSKWRVSLEEYPWDKWP 255
D+D+ L ++D T + I Y A ++KW++S + +P
Sbjct: 189 DEDVLFYPDQLTPLINDKTINTSTFSIYGEKYEAGVAVNHGEDNAKWQISKNSFKCSVYP 248
Query: 256 PYVTAGAYVVSNKAMKMLYVGSLFVKHFRF 345
Y++ Y ++ KA K + + KH +F
Sbjct: 249 SYLSGPTYFLTRKAAKRIVEAT---KHRKF 275
>U64858-7|AAB18285.2| 340|Caenorhabditis elegans Hypothetical
protein C16D9.6 protein.
Length = 340
Score = 28.3 bits (60), Expect = 3.4
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +1
Query: 1 NNTIKTVMSFRWIFQHCA-EAQHYLFTDDDMYISVQNLLKYVSDVTTASERDGILFAGYV 177
N K+ +F I+ + + E YL DDD ++ V+NL ++S + D + GYV
Sbjct: 155 NLFFKSRYAFHHIYTNISSEFDWYLKADDDTFVIVENLRSFLSTLNP----DEPHYLGYV 210
Query: 178 FK 183
K
Sbjct: 211 LK 212
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 27.9 bits (59), Expect = 4.6
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +1
Query: 325 FVKHFRFDDIYLGIVAKKMGIVPTHCPHFHFYKKPYEREVYSD 453
F KH +FD+I G KK GI + H Y+ P R ++D
Sbjct: 74 FAKHIKFDEIDKGKEEKKRGIT-INVAHIG-YESPLRRYSHTD 114
>U67955-3|AAO91745.1| 655|Caenorhabditis elegans Hypothetical
protein C16H3.3b protein.
Length = 655
Score = 27.9 bits (59), Expect = 4.6
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +3
Query: 303 DALRRKLVREAFQIR*HLPRHSREEDGHSADSLSAFPLLQEAVRARG 443
DA RRK REA ++ +EED D A P+L+ +V G
Sbjct: 6 DAARRKAQREAKKLE--ALGEKQEEDDEDPDDSFAMPILESSVDTPG 50
>U67955-2|AAB07583.2| 791|Caenorhabditis elegans Hypothetical
protein C16H3.3a protein.
Length = 791
Score = 27.9 bits (59), Expect = 4.6
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +3
Query: 303 DALRRKLVREAFQIR*HLPRHSREEDGHSADSLSAFPLLQEAVRARG 443
DA RRK REA ++ +EED D A P+L+ +V G
Sbjct: 142 DAARRKAQREAKKLE--ALGEKQEEDDEDPDDSFAMPILESSVDTPG 186
>AF039040-4|AAB94182.1| 368|Caenorhabditis elegans Hypothetical
protein T22B11.2 protein.
Length = 368
Score = 27.9 bits (59), Expect = 4.6
Identities = 12/39 (30%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +1
Query: 13 KTVMSFRWIFQHCAEAQHYLFT-DDDMYISVQNLLKYVS 126
KT ++ +I+++ ++ + F DDD Y+ V+NL +Y++
Sbjct: 160 KTRLALLYIYKYVSKDFDWYFKGDDDTYLIVENLQRYLA 198
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 27.9 bits (59), Expect = 4.6
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +1
Query: 325 FVKHFRFDDIYLGIVAKKMGIVPTHCPHFHFYKKPYEREVYSD 453
F KH +FD+I G KK GI + H Y+ P R ++D
Sbjct: 74 FAKHIKFDEIDKGKEEKKRGIT-INVAHIG-YESPLRRYSHTD 114
>Z81147-11|CAL69739.1| 323|Caenorhabditis elegans Hypothetical
protein T09E11.12 protein.
Length = 323
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/39 (28%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +1
Query: 13 KTVMSFRWIFQHCAEA-QHYLFTDDDMYISVQNLLKYVS 126
K++ F + + H +++ YL DDD Y ++ +L +Y++
Sbjct: 141 KSIFGFYYSYVHISKSFDWYLKADDDTYFAMDHLREYLN 179
>Z35641-2|CAA84707.2| 389|Caenorhabditis elegans Hypothetical
protein C38H2.2 protein.
Length = 389
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +1
Query: 13 KTVMSFRWIFQH-CAEAQHYLFTDDDMYISVQNL 111
KT +F++I+ H + +L DDD Y+ ++NL
Sbjct: 163 KTKGAFKYIYDHHLNDYDWFLKADDDTYVVMENL 196
>U21323-10|AAW30670.1| 805|Caenorhabditis elegans Hypothetical
protein C45G9.10b protein.
Length = 805
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -2
Query: 326 NKLPT*SIFIALFDTTYAPAVT*GGHLSQGYSSK 225
N+LP + I FDT Y +T H+S GY+S+
Sbjct: 473 NELPVEHLSIERFDTVYHVKIT-NKHVSIGYTSE 505
>U21323-9|AAA62553.1| 971|Caenorhabditis elegans Hypothetical
protein C45G9.10a protein.
Length = 971
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -2
Query: 326 NKLPT*SIFIALFDTTYAPAVT*GGHLSQGYSSK 225
N+LP + I FDT Y +T H+S GY+S+
Sbjct: 639 NELPVEHLSIERFDTVYHVKIT-NKHVSIGYTSE 671
>AF269063-1|AAG36940.1| 389|Caenorhabditis elegans core1
UDP-galactose:N-acetylgalactosamine-alpha-R beta
1,3-galactosyltransferase protein.
Length = 389
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +1
Query: 13 KTVMSFRWIFQH-CAEAQHYLFTDDDMYISVQNL 111
KT +F++I+ H + +L DDD Y+ ++NL
Sbjct: 163 KTKGAFKYIYDHHLNDYDWFLKADDDTYVVMENL 196
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,009,775
Number of Sequences: 27780
Number of extensions: 185734
Number of successful extensions: 712
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 707
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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