Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32389
         (353 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.          39   5e-05
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.          39   5e-05
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.          39   5e-05
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.           38   1e-04
Y17705-1|CAA76825.1|  124|Anopheles gambiae opsin protein.             23   4.4  

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 39.1 bits (87), Expect = 5e-05
 Identities = 16/21 (76%), Positives = 17/21 (80%)
 Frame = -1

Query: 332 RMWISKQGSHESGPGIVHRKC 270
           +MWISKQ   ESGP IVHRKC
Sbjct: 355 QMWISKQEYDESGPSIVHRKC 375


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 39.1 bits (87), Expect = 5e-05
 Identities = 16/21 (76%), Positives = 17/21 (80%)
 Frame = -1

Query: 332 RMWISKQGSHESGPGIVHRKC 270
           +MWISKQ   ESGP IVHRKC
Sbjct: 355 QMWISKQEYDESGPSIVHRKC 375


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 39.1 bits (87), Expect = 5e-05
 Identities = 16/21 (76%), Positives = 17/21 (80%)
 Frame = -1

Query: 332 RMWISKQGSHESGPGIVHRKC 270
           +MWISKQ   ESGP IVHRKC
Sbjct: 355 QMWISKQEYDESGPSIVHRKC 375


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score = 37.5 bits (83), Expect = 1e-04
 Identities = 15/20 (75%), Positives = 15/20 (75%)
 Frame = -1

Query: 329 MWISKQGSHESGPGIVHRKC 270
           MWISK    E GPGIVHRKC
Sbjct: 356 MWISKHEYDEGGPGIVHRKC 375


>Y17705-1|CAA76825.1|  124|Anopheles gambiae opsin protein.
          Length = 124

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +2

Query: 197 DGCVQNSDEHNTTQXRGHAXALXT 268
           +GCV++ +EH      G+  +L T
Sbjct: 33  EGCVRSREEHARAGQEGNVASLRT 56


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 315,327
Number of Sequences: 2352
Number of extensions: 5041
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 25794900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)