Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32388
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039040-6|AAB94185.2| 1029|Caenorhabditis elegans Hypothetical ... 258 2e-69
Z78201-4|CAB01590.2| 911|Caenorhabditis elegans Hypothetical pr... 153 5e-38
Z78019-10|CAE46691.1| 911|Caenorhabditis elegans Hypothetical p... 153 5e-38
Z68005-4|CAA91992.2| 430|Caenorhabditis elegans Hypothetical pr... 30 1.1
AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical ... 29 1.5
Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z81497-7|CAB04083.3| 652|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z75955-17|CAB00127.3| 652|Caenorhabditis elegans Hypothetical p... 27 8.0
Z54306-6|CAA91090.2| 321|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical pr... 27 8.0
U58732-4|AAB00595.1| 147|Caenorhabditis elegans Helix loop heli... 27 8.0
AL031268-1|CAD59161.1| 321|Caenorhabditis elegans Hypothetical ... 27 8.0
AF369899-1|AAK72958.1| 147|Caenorhabditis elegans Fer3-like pro... 27 8.0
>AF039040-6|AAB94185.2| 1029|Caenorhabditis elegans Hypothetical
protein T22B11.5 protein.
Length = 1029
Score = 258 bits (631), Expect = 2e-69
Identities = 118/171 (69%), Positives = 138/171 (80%), Gaps = 3/171 (1%)
Frame = +2
Query: 11 GTRVRLSGEDVERGTFSHRHHVLHHQKVDKATYCALAHLYPDQAPYTVCNSSLSEYGVLG 190
G VRLSG+DV+RGTFSHRHHVLH QKVD+ Y L L Q YTVCNSSLSEY VLG
Sbjct: 668 GIHVRLSGQDVQRGTFSHRHHVLHDQKVDQKIYNPLNDLSEGQGEYTVCNSSLSEYAVLG 727
Query: 191 FEVGYSVTNPNALVLWEAQFGDFNNVAQCIIDQFISSGQAKWVRQSGIVLLQPHGMEGMG 370
FE+GYS+ +PN+LV+WEAQFGDF+N AQCIIDQFISSGQ+KW+RQSG+V+L PHG EGMG
Sbjct: 728 FELGYSMVDPNSLVIWEAQFGDFSNTAQCIIDQFISSGQSKWIRQSGLVMLLPHGYEGMG 787
Query: 371 PEHSSARLERFLQMCSDDPDYMPPE---SPDYEVRQLHDCNWIVANCSTPA 514
PEHSSAR ERFLQMC++D + + +E +QLHD NWIVANC+TPA
Sbjct: 788 PEHSSARPERFLQMCNEDDEIDLEKIAFEGTFEAQQLHDTNWIVANCTTPA 838
>Z78201-4|CAB01590.2| 911|Caenorhabditis elegans Hypothetical protein
ZK836.2 protein.
Length = 911
Score = 153 bits (372), Expect = 5e-38
Identities = 74/153 (48%), Positives = 97/153 (63%), Gaps = 1/153 (0%)
Frame = +2
Query: 11 GTRVRLSGEDVERGTFSHRHHVLHHQKVDKATYCALAHLYPDQA-PYTVCNSSLSEYGVL 187
G VR+SG+DV RGTF HRH ++ Q D + L L +Q V N+ LSE +L
Sbjct: 576 GNDVRISGQDVGRGTFCHRHAMMVDQSTDHI-HIPLNELVEEQKNQLEVANNLLSEEAIL 634
Query: 188 GFEVGYSVTNPNALVLWEAQFGDFNNVAQCIIDQFISSGQAKWVRQSGIVLLQPHGMEGM 367
GFE G+S NP L +WEAQFGDF N AQ IID F++S ++KW+ SG+ +L PHG +G
Sbjct: 635 GFEWGFSSENPRRLCIWEAQFGDFFNGAQIIIDTFLASAESKWLTSSGLTMLLPHGFDGA 694
Query: 368 GPEHSSARLERFLQMCSDDPDYMPPESPDYEVR 466
GPEHSS R+ERFLQ+C D P + + +R
Sbjct: 695 GPEHSSCRMERFLQLCDSREDQTPVDGENVNMR 727
>Z78019-10|CAE46691.1| 911|Caenorhabditis elegans Hypothetical
protein ZK836.2 protein.
Length = 911
Score = 153 bits (372), Expect = 5e-38
Identities = 74/153 (48%), Positives = 97/153 (63%), Gaps = 1/153 (0%)
Frame = +2
Query: 11 GTRVRLSGEDVERGTFSHRHHVLHHQKVDKATYCALAHLYPDQA-PYTVCNSSLSEYGVL 187
G VR+SG+DV RGTF HRH ++ Q D + L L +Q V N+ LSE +L
Sbjct: 576 GNDVRISGQDVGRGTFCHRHAMMVDQSTDHI-HIPLNELVEEQKNQLEVANNLLSEEAIL 634
Query: 188 GFEVGYSVTNPNALVLWEAQFGDFNNVAQCIIDQFISSGQAKWVRQSGIVLLQPHGMEGM 367
GFE G+S NP L +WEAQFGDF N AQ IID F++S ++KW+ SG+ +L PHG +G
Sbjct: 635 GFEWGFSSENPRRLCIWEAQFGDFFNGAQIIIDTFLASAESKWLTSSGLTMLLPHGFDGA 694
Query: 368 GPEHSSARLERFLQMCSDDPDYMPPESPDYEVR 466
GPEHSS R+ERFLQ+C D P + + +R
Sbjct: 695 GPEHSSCRMERFLQLCDSREDQTPVDGENVNMR 727
>Z68005-4|CAA91992.2| 430|Caenorhabditis elegans Hypothetical
protein F59F3.2 protein.
Length = 430
Score = 29.9 bits (64), Expect = 1.1
Identities = 26/73 (35%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Frame = +1
Query: 187 GFRGRLLRNEPERPGAVGGPVRR-LQQRGPVHHRPVHLQ--RTGQVGAPVRDCTAAASRH 357
G RG EP RPG G P R + G + R Q RTG G P +
Sbjct: 166 GLRGEA--GEPGRPGTPGDPGRPGTNEPGGIGARGPRGQSGRTGSKGDPGEAGQDFVQLN 223
Query: 358 GGDGPRALLGSFG 396
G GP+ L GS G
Sbjct: 224 GLPGPKGLPGSVG 236
>AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical
protein E01A2.4 protein.
Length = 504
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = -2
Query: 431 SPGRRSTSARTSPNEPRSARGPSPPCREAAAVQSRTGAP 315
SP RR S SP R R SPP + QSR+ +P
Sbjct: 133 SPPRRQVSRSRSPPPRRQQRSRSPPPAKRRRDQSRSKSP 171
>Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical
protein C15A11.1 protein.
Length = 303
Score = 28.7 bits (61), Expect = 2.6
Identities = 23/55 (41%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
Frame = -2
Query: 449 GFPGACSP-GRRSTSARTSPNEPRS-----ARGPSPPCRE-AAAVQSRTGAPTWP 306
G PGA P G+ + TS NEP S GP+ P E AAA +S G P P
Sbjct: 160 GQPGAPGPNGQPGAAGTTSTNEPGSPGPAGPPGPAGPAGEDAAAPESPPGPPGPP 214
>Z81497-7|CAB04083.3| 652|Caenorhabditis elegans Hypothetical
protein R07B7.2 protein.
Length = 652
Score = 27.1 bits (57), Expect = 8.0
Identities = 25/86 (29%), Positives = 34/86 (39%), Gaps = 3/86 (3%)
Frame = -1
Query: 372 GPIPSMP*GCSSTIPDWR-THLACPL-EMNWSMMHWATLLKSPNWASHSTRAFGFVTE*P 199
G PSMP PDW+ H P + MM W + P+ ++S F E P
Sbjct: 339 GMFPSMPNSSGGQGPDWQNNHFIRPFGQPAAGMMSWHPGM-MPSHMNNSAAPSSFF-ESP 396
Query: 198 TSKPRTPYSDSE-LLHTV*GAWSGYR 124
P + + LLH+ AW R
Sbjct: 397 FMPPYDVFMQQQMLLHSQYAAWEQQR 422
>Z75955-17|CAB00127.3| 652|Caenorhabditis elegans Hypothetical
protein R07B7.2 protein.
Length = 652
Score = 27.1 bits (57), Expect = 8.0
Identities = 25/86 (29%), Positives = 34/86 (39%), Gaps = 3/86 (3%)
Frame = -1
Query: 372 GPIPSMP*GCSSTIPDWR-THLACPL-EMNWSMMHWATLLKSPNWASHSTRAFGFVTE*P 199
G PSMP PDW+ H P + MM W + P+ ++S F E P
Sbjct: 339 GMFPSMPNSSGGQGPDWQNNHFIRPFGQPAAGMMSWHPGM-MPSHMNNSAAPSSFF-ESP 396
Query: 198 TSKPRTPYSDSE-LLHTV*GAWSGYR 124
P + + LLH+ AW R
Sbjct: 397 FMPPYDVFMQQQMLLHSQYAAWEQQR 422
>Z54306-6|CAA91090.2| 321|Caenorhabditis elegans Hypothetical
protein B0457.2 protein.
Length = 321
Score = 27.1 bits (57), Expect = 8.0
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 5 EFGTRVRLSGEDVERGTFSHRHHVLHHQK 91
+ TR S + E +SHR H HH+K
Sbjct: 99 DVATRAPPSSNEYEEERYSHRKHKHHHRK 127
>Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical protein
R10E11.1b protein.
Length = 2056
Score = 27.1 bits (57), Expect = 8.0
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -3
Query: 400 PLQTSRGVLGAHPLHAVRLQQYNPGLAHPLGLSAG 296
P+Q G+ G +P + QQ +PGL +P G G
Sbjct: 1783 PMQRPGGLGGMNPQQQPQQQQGHPGLQNPGGRPGG 1817
>Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical protein
R10E11.1a protein.
Length = 2045
Score = 27.1 bits (57), Expect = 8.0
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -3
Query: 400 PLQTSRGVLGAHPLHAVRLQQYNPGLAHPLGLSAG 296
P+Q G+ G +P + QQ +PGL +P G G
Sbjct: 1772 PMQRPGGLGGMNPQQQPQQQQGHPGLQNPGGRPGG 1806
>U58732-4|AAB00595.1| 147|Caenorhabditis elegans Helix loop helix
protein 13 protein.
Length = 147
Score = 27.1 bits (57), Expect = 8.0
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 247 VRRLQQRGPVHHRPVHLQRTGQVGAP 324
+R + G + VH+ RTGQ+GAP
Sbjct: 97 LRTPEDSGQYIQKCVHMARTGQIGAP 122
>AL031268-1|CAD59161.1| 321|Caenorhabditis elegans Hypothetical
protein B0457.2 protein.
Length = 321
Score = 27.1 bits (57), Expect = 8.0
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 5 EFGTRVRLSGEDVERGTFSHRHHVLHHQK 91
+ TR S + E +SHR H HH+K
Sbjct: 99 DVATRAPPSSNEYEEERYSHRKHKHHHRK 127
>AF369899-1|AAK72958.1| 147|Caenorhabditis elegans Fer3-like
protein.
Length = 147
Score = 27.1 bits (57), Expect = 8.0
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 247 VRRLQQRGPVHHRPVHLQRTGQVGAP 324
+R + G + VH+ RTGQ+GAP
Sbjct: 97 LRTPEDSGQYIQKCVHMARTGQIGAP 122
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,584,823
Number of Sequences: 27780
Number of extensions: 327067
Number of successful extensions: 1313
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1307
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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