Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32387
(516 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X06825-1|CAA29971.1| 284|Homo sapiens protein ( Human mRNA for ... 33 0.59
M12126-1|AAA61229.1| 131|Homo sapiens TPM2 protein. 33 0.59
AL133410-4|CAI10977.1| 284|Homo sapiens tropomyosin 2 (beta) pr... 33 0.59
M19714-1|AAA61226.1| 264|Homo sapiens TPM1 protein. 33 0.78
M19713-1|AAA61225.1| 284|Homo sapiens TPM1 protein. 33 0.78
AY640415-1|AAT68295.1| 284|Homo sapiens tropomyosin alpha stria... 33 0.78
AY640414-1|AAT68294.1| 284|Homo sapiens sarcomeric tropomyosin ... 33 0.78
AL133410-3|CAI10976.1| 322|Homo sapiens tropomyosin 2 (beta) pr... 33 0.78
AL133410-1|CAI10975.1| 284|Homo sapiens tropomyosin 2 (beta) pr... 33 0.78
AK129882-1|BAC85248.1| 217|Homo sapiens protein ( Homo sapiens ... 33 0.78
X04201-1|CAA27798.1| 285|Homo sapiens protein ( Human skeletal ... 32 1.0
BC062740-1|AAH62740.1| 158|Homo sapiens TPM3 protein protein. 32 1.0
BC053545-1|AAH53545.1| 245|Homo sapiens tropomyosin 1 (alpha) p... 32 1.0
BC050473-1|AAH50473.1| 287|Homo sapiens TPM1 protein protein. 32 1.0
BC008425-1|AAH08425.1| 285|Homo sapiens tropomyosin 3 protein. 32 1.0
BC008407-1|AAH08407.1| 285|Homo sapiens tropomyosin 3 protein. 32 1.0
AL590431-12|CAH71269.1| 284|Homo sapiens tropomyosin 3 protein. 32 1.0
AL590431-11|CAH71270.1| 242|Homo sapiens tropomyosin 3 protein. 32 1.0
AL590431-4|CAH71262.1| 158|Homo sapiens tropomyosin 3 protein. 32 1.0
AK131384-1|BAD18535.1| 326|Homo sapiens protein ( Homo sapiens ... 32 1.0
AK092690-1|BAC03946.1| 243|Homo sapiens protein ( Homo sapiens ... 32 1.0
AB209041-1|BAD92278.1| 303|Homo sapiens TPM1 protein variant pr... 32 1.0
AL590431-10|CAH71268.1| 247|Homo sapiens tropomyosin 3 protein. 32 1.4
AL590431-9|CAH71267.1| 248|Homo sapiens tropomyosin 3 protein. 32 1.4
AL590431-3|CAH71261.1| 158|Homo sapiens tropomyosin 3 protein. 32 1.4
M12127-1|AAA36774.1| 131|Homo sapiens protein ( Human cytoskele... 31 1.8
>X06825-1|CAA29971.1| 284|Homo sapiens protein ( Human mRNA for
skeletal beta-tropomyosin. ).
Length = 284
Score = 33.1 bits (72), Expect = 0.59
Identities = 27/89 (30%), Positives = 35/89 (39%)
Frame = -1
Query: 510 ESKIVELEEELRVVGNXLKXLXXXXXXXXXXXXXXKNQIKXLPXRXKXXXXXXXXXXRSV 331
ESK +LEEEL++V N LK L + +IK L + K RSV
Sbjct: 187 ESKCGDLEEELKIVTNNLKSLEAQADKYSTKEDKYEEEIKLLEEKLKEAETRAEFAERSV 246
Query: 330 QKLQXXXXXXXXXXXXXXXKXKXIGGDLD 244
KL+ K K I +LD
Sbjct: 247 AKLEKTIDDLEDEVYAQKMKYKAISEELD 275
>M12126-1|AAA61229.1| 131|Homo sapiens TPM2 protein.
Length = 131
Score = 33.1 bits (72), Expect = 0.59
Identities = 27/89 (30%), Positives = 35/89 (39%)
Frame = -1
Query: 510 ESKIVELEEELRVVGNXLKXLXXXXXXXXXXXXXXKNQIKXLPXRXKXXXXXXXXXXRSV 331
ESK +LEEEL++V N LK L + +IK L + K RSV
Sbjct: 34 ESKCGDLEEELKIVTNNLKSLEAQADKYSTKEDKYEEEIKLLEEKLKEAETRAEFAERSV 93
Query: 330 QKLQXXXXXXXXXXXXXXXKXKXIGGDLD 244
KL+ K K I +LD
Sbjct: 94 AKLEKTIDDLEDEVYAQKMKYKAISEELD 122
>AL133410-4|CAI10977.1| 284|Homo sapiens tropomyosin 2 (beta)
protein.
Length = 284
Score = 33.1 bits (72), Expect = 0.59
Identities = 27/89 (30%), Positives = 35/89 (39%)
Frame = -1
Query: 510 ESKIVELEEELRVVGNXLKXLXXXXXXXXXXXXXXKNQIKXLPXRXKXXXXXXXXXXRSV 331
ESK +LEEEL++V N LK L + +IK L + K RSV
Sbjct: 187 ESKCGDLEEELKIVTNNLKSLEAQADKYSTKEDKYEEEIKLLEEKLKEAETRAEFAERSV 246
Query: 330 QKLQXXXXXXXXXXXXXXXKXKXIGGDLD 244
KL+ K K I +LD
Sbjct: 247 AKLEKTIDDLEDEVYAQKMKYKAISEELD 275
>M19714-1|AAA61226.1| 264|Homo sapiens TPM1 protein.
Length = 264
Score = 32.7 bits (71), Expect = 0.78
Identities = 27/89 (30%), Positives = 33/89 (37%)
Frame = -1
Query: 510 ESKIVELEEELRVVGNXLKXLXXXXXXXXXXXXXXKNQIKXLPXRXKXXXXXXXXXXRSV 331
E K ELEEEL+ V N LK L + +IK L + K RSV
Sbjct: 167 EGKCAELEEELKTVTNNLKSLEAQAEKYSQKEDRYEEEIKVLSDKLKEAETRAEFAERSV 226
Query: 330 QKLQXXXXXXXXXXXXXXXKXKXIGGDLD 244
KL+ K K I +LD
Sbjct: 227 TKLEKSIDDLEDELYAQKLKYKAISEELD 255
>M19713-1|AAA61225.1| 284|Homo sapiens TPM1 protein.
Length = 284
Score = 32.7 bits (71), Expect = 0.78
Identities = 27/89 (30%), Positives = 33/89 (37%)
Frame = -1
Query: 510 ESKIVELEEELRVVGNXLKXLXXXXXXXXXXXXXXKNQIKXLPXRXKXXXXXXXXXXRSV 331
E K ELEEEL+ V N LK L + +IK L + K RSV
Sbjct: 187 EGKCAELEEELKTVTNNLKSLEAQAEKYSQKEDRYEEEIKVLSDKLKEAETRAEFAERSV 246
Query: 330 QKLQXXXXXXXXXXXXXXXKXKXIGGDLD 244
KL+ K K I +LD
Sbjct: 247 TKLEKSIDDLEDELYAQKLKYKAISEELD 275
>AY640415-1|AAT68295.1| 284|Homo sapiens tropomyosin alpha striated
muscle isoform protein.
Length = 284
Score = 32.7 bits (71), Expect = 0.78
Identities = 27/89 (30%), Positives = 33/89 (37%)
Frame = -1
Query: 510 ESKIVELEEELRVVGNXLKXLXXXXXXXXXXXXXXKNQIKXLPXRXKXXXXXXXXXXRSV 331
E K ELEEEL+ V N LK L + +IK L + K RSV
Sbjct: 187 EGKCAELEEELKTVTNDLKSLEAQAEKYSQKEDRYEEEIKVLSDKLKEAETRAEFAERSV 246
Query: 330 QKLQXXXXXXXXXXXXXXXKXKXIGGDLD 244
KL+ K K I +LD
Sbjct: 247 TKLEKSIDDLEDELYAQKLKYKAISEELD 275
>AY640414-1|AAT68294.1| 284|Homo sapiens sarcomeric tropomyosin
kappa protein.
Length = 284
Score = 32.7 bits (71), Expect = 0.78
Identities = 27/89 (30%), Positives = 33/89 (37%)
Frame = -1
Query: 510 ESKIVELEEELRVVGNXLKXLXXXXXXXXXXXXXXKNQIKXLPXRXKXXXXXXXXXXRSV 331
E K ELEEEL+ V N LK L + +IK L + K RSV
Sbjct: 187 EGKCAELEEELKTVTNDLKSLEAQAEKYSQKEDRYEEEIKVLSDKLKEAETRAEFAERSV 246
Query: 330 QKLQXXXXXXXXXXXXXXXKXKXIGGDLD 244
KL+ K K I +LD
Sbjct: 247 TKLEKSIDDLEDELYAQKLKYKAISEELD 275
>AL133410-3|CAI10976.1| 322|Homo sapiens tropomyosin 2 (beta)
protein.
Length = 322
Score = 32.7 bits (71), Expect = 0.78
Identities = 22/64 (34%), Positives = 29/64 (45%)
Frame = -1
Query: 510 ESKIVELEEELRVVGNXLKXLXXXXXXXXXXXXXXKNQIKXLPXRXKXXXXXXXXXXRSV 331
ESK +LEEEL++V N LK L + +IK L + K RSV
Sbjct: 187 ESKCGDLEEELKIVTNNLKSLEAQADKYSTKEDKYEEEIKLLEEKLKEAETRAEFAERSV 246
Query: 330 QKLQ 319
KL+
Sbjct: 247 AKLE 250
>AL133410-1|CAI10975.1| 284|Homo sapiens tropomyosin 2 (beta)
protein.
Length = 284
Score = 32.7 bits (71), Expect = 0.78
Identities = 22/64 (34%), Positives = 29/64 (45%)
Frame = -1
Query: 510 ESKIVELEEELRVVGNXLKXLXXXXXXXXXXXXXXKNQIKXLPXRXKXXXXXXXXXXRSV 331
ESK +LEEEL++V N LK L + +IK L + K RSV
Sbjct: 187 ESKCGDLEEELKIVTNNLKSLEAQADKYSTKEDKYEEEIKLLEEKLKEAETRAEFAERSV 246
Query: 330 QKLQ 319
KL+
Sbjct: 247 AKLE 250
>AK129882-1|BAC85248.1| 217|Homo sapiens protein ( Homo sapiens
cDNA FLJ26372 fis, clone HRT06233. ).
Length = 217
Score = 32.7 bits (71), Expect = 0.78
Identities = 27/89 (30%), Positives = 33/89 (37%)
Frame = -1
Query: 510 ESKIVELEEELRVVGNXLKXLXXXXXXXXXXXXXXKNQIKXLPXRXKXXXXXXXXXXRSV 331
E K ELEEEL+ V N LK L + +IK L + K RSV
Sbjct: 120 EGKCAELEEELKTVTNNLKSLEAQAEKYSQKEDRYEEEIKVLSDKLKEAETRAEFAERSV 179
Query: 330 QKLQXXXXXXXXXXXXXXXKXKXIGGDLD 244
KL+ K K I +LD
Sbjct: 180 TKLEKSIDDLEDELYAQKLKYKAISEELD 208
>X04201-1|CAA27798.1| 285|Homo sapiens protein ( Human skeletal
muscle 1.3 kb mRNA for tropomyosin. ).
Length = 285
Score = 32.3 bits (70), Expect = 1.0
Identities = 28/89 (31%), Positives = 34/89 (38%)
Frame = -1
Query: 510 ESKIVELEEELRVVGNXLKXLXXXXXXXXXXXXXXKNQIKXLPXRXKXXXXXXXXXXRSV 331
ESK ELEEEL+ V N LK L + +IK L + K RSV
Sbjct: 188 ESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSV 247
Query: 330 QKLQXXXXXXXXXXXXXXXKXKXIGGDLD 244
KL+ K K I +LD
Sbjct: 248 AKLEKTIDDLEDELYAQKLKYKAISEELD 276
>BC062740-1|AAH62740.1| 158|Homo sapiens TPM3 protein protein.
Length = 158
Score = 32.3 bits (70), Expect = 1.0
Identities = 28/89 (31%), Positives = 34/89 (38%)
Frame = -1
Query: 510 ESKIVELEEELRVVGNXLKXLXXXXXXXXXXXXXXKNQIKXLPXRXKXXXXXXXXXXRSV 331
ESK ELEEEL+ V N LK L + +IK L + K RSV
Sbjct: 61 ESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSV 120
Query: 330 QKLQXXXXXXXXXXXXXXXKXKXIGGDLD 244
KL+ K K I +LD
Sbjct: 121 AKLEKTIDDLEDELYAQKLKYKAISEELD 149
>BC053545-1|AAH53545.1| 245|Homo sapiens tropomyosin 1 (alpha)
protein.
Length = 245
Score = 32.3 bits (70), Expect = 1.0
Identities = 22/64 (34%), Positives = 27/64 (42%)
Frame = -1
Query: 510 ESKIVELEEELRVVGNXLKXLXXXXXXXXXXXXXXKNQIKXLPXRXKXXXXXXXXXXRSV 331
E K ELEEEL+ V N LK L + +IK L + K RSV
Sbjct: 151 EGKCAELEEELKTVTNNLKSLEAQAEKYSQKEDRYEEEIKVLSDKLKEAETRAEFAERSV 210
Query: 330 QKLQ 319
KL+
Sbjct: 211 TKLE 214
>BC050473-1|AAH50473.1| 287|Homo sapiens TPM1 protein protein.
Length = 287
Score = 32.3 bits (70), Expect = 1.0
Identities = 22/64 (34%), Positives = 27/64 (42%)
Frame = -1
Query: 510 ESKIVELEEELRVVGNXLKXLXXXXXXXXXXXXXXKNQIKXLPXRXKXXXXXXXXXXRSV 331
E K ELEEEL+ V N LK L + +IK L + K RSV
Sbjct: 193 EGKCAELEEELKTVTNNLKSLEAQAEKYSQKEDRYEEEIKVLSDKLKEAETRAEFAERSV 252
Query: 330 QKLQ 319
KL+
Sbjct: 253 TKLE 256
>BC008425-1|AAH08425.1| 285|Homo sapiens tropomyosin 3 protein.
Length = 285
Score = 32.3 bits (70), Expect = 1.0
Identities = 28/89 (31%), Positives = 34/89 (38%)
Frame = -1
Query: 510 ESKIVELEEELRVVGNXLKXLXXXXXXXXXXXXXXKNQIKXLPXRXKXXXXXXXXXXRSV 331
ESK ELEEEL+ V N LK L + +IK L + K RSV
Sbjct: 188 ESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSV 247
Query: 330 QKLQXXXXXXXXXXXXXXXKXKXIGGDLD 244
KL+ K K I +LD
Sbjct: 248 AKLEKTIDDLEDELYAQKLKYKAISEELD 276
>BC008407-1|AAH08407.1| 285|Homo sapiens tropomyosin 3 protein.
Length = 285
Score = 32.3 bits (70), Expect = 1.0
Identities = 28/89 (31%), Positives = 34/89 (38%)
Frame = -1
Query: 510 ESKIVELEEELRVVGNXLKXLXXXXXXXXXXXXXXKNQIKXLPXRXKXXXXXXXXXXRSV 331
ESK ELEEEL+ V N LK L + +IK L + K RSV
Sbjct: 188 ESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSV 247
Query: 330 QKLQXXXXXXXXXXXXXXXKXKXIGGDLD 244
KL+ K K I +LD
Sbjct: 248 AKLEKTIDDLEDELYAQKLKYKAISEELD 276
>AL590431-12|CAH71269.1| 284|Homo sapiens tropomyosin 3 protein.
Length = 284
Score = 32.3 bits (70), Expect = 1.0
Identities = 28/89 (31%), Positives = 34/89 (38%)
Frame = -1
Query: 510 ESKIVELEEELRVVGNXLKXLXXXXXXXXXXXXXXKNQIKXLPXRXKXXXXXXXXXXRSV 331
ESK ELEEEL+ V N LK L + +IK L + K RSV
Sbjct: 187 ESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSV 246
Query: 330 QKLQXXXXXXXXXXXXXXXKXKXIGGDLD 244
KL+ K K I +LD
Sbjct: 247 AKLEKTIDDLEDELYAQKLKYKAISEELD 275
>AL590431-11|CAH71270.1| 242|Homo sapiens tropomyosin 3 protein.
Length = 242
Score = 32.3 bits (70), Expect = 1.0
Identities = 28/89 (31%), Positives = 34/89 (38%)
Frame = -1
Query: 510 ESKIVELEEELRVVGNXLKXLXXXXXXXXXXXXXXKNQIKXLPXRXKXXXXXXXXXXRSV 331
ESK ELEEEL+ V N LK L + +IK L + K RSV
Sbjct: 145 ESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSV 204
Query: 330 QKLQXXXXXXXXXXXXXXXKXKXIGGDLD 244
KL+ K K I +LD
Sbjct: 205 AKLEKTIDDLEDELYAQKLKYKAISEELD 233
>AL590431-4|CAH71262.1| 158|Homo sapiens tropomyosin 3 protein.
Length = 158
Score = 32.3 bits (70), Expect = 1.0
Identities = 28/89 (31%), Positives = 34/89 (38%)
Frame = -1
Query: 510 ESKIVELEEELRVVGNXLKXLXXXXXXXXXXXXXXKNQIKXLPXRXKXXXXXXXXXXRSV 331
ESK ELEEEL+ V N LK L + +IK L + K RSV
Sbjct: 61 ESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSV 120
Query: 330 QKLQXXXXXXXXXXXXXXXKXKXIGGDLD 244
KL+ K K I +LD
Sbjct: 121 AKLEKTIDDLEDELYAQKLKYKAISEELD 149
>AK131384-1|BAD18535.1| 326|Homo sapiens protein ( Homo sapiens
cDNA FLJ16459 fis, clone BRCAN2002473, moderately
similar to Tropomyosin, fibroblast isoform 2. ).
Length = 326
Score = 32.3 bits (70), Expect = 1.0
Identities = 22/64 (34%), Positives = 27/64 (42%)
Frame = -1
Query: 510 ESKIVELEEELRVVGNXLKXLXXXXXXXXXXXXXXKNQIKXLPXRXKXXXXXXXXXXRSV 331
E K ELEEEL+ V N LK L + +IK L + K RSV
Sbjct: 229 EGKCAELEEELKTVTNNLKSLEAQAEKYSQKEDRYEEEIKVLSDKLKEAETRAEFAERSV 288
Query: 330 QKLQ 319
KL+
Sbjct: 289 TKLE 292
>AK092690-1|BAC03946.1| 243|Homo sapiens protein ( Homo sapiens
cDNA FLJ35371 fis, clone SKMUS2001740, highly similar to
TROPOMYOSIN ALPHA CHAIN, SKELETAL MUSCLE TYPE. ).
Length = 243
Score = 32.3 bits (70), Expect = 1.0
Identities = 28/89 (31%), Positives = 34/89 (38%)
Frame = -1
Query: 510 ESKIVELEEELRVVGNXLKXLXXXXXXXXXXXXXXKNQIKXLPXRXKXXXXXXXXXXRSV 331
ESK ELEEEL+ V N LK L + +IK L + K RSV
Sbjct: 146 ESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSV 205
Query: 330 QKLQXXXXXXXXXXXXXXXKXKXIGGDLD 244
KL+ K K I +LD
Sbjct: 206 AKLEKTIDDLEDELYAQKLKYKAISEELD 234
>AB209041-1|BAD92278.1| 303|Homo sapiens TPM1 protein variant
protein.
Length = 303
Score = 32.3 bits (70), Expect = 1.0
Identities = 22/64 (34%), Positives = 27/64 (42%)
Frame = -1
Query: 510 ESKIVELEEELRVVGNXLKXLXXXXXXXXXXXXXXKNQIKXLPXRXKXXXXXXXXXXRSV 331
E K ELEEEL+ V N LK L + +IK L + K RSV
Sbjct: 209 EGKCAELEEELKTVTNNLKSLEAQAEKYSQKEDRYEEEIKVLSDKLKEAETRAEFAERSV 268
Query: 330 QKLQ 319
KL+
Sbjct: 269 TKLE 272
>AL590431-10|CAH71268.1| 247|Homo sapiens tropomyosin 3 protein.
Length = 247
Score = 31.9 bits (69), Expect = 1.4
Identities = 23/64 (35%), Positives = 28/64 (43%)
Frame = -1
Query: 510 ESKIVELEEELRVVGNXLKXLXXXXXXXXXXXXXXKNQIKXLPXRXKXXXXXXXXXXRSV 331
ESK ELEEEL+ V N LK L + +IK L + K RSV
Sbjct: 151 ESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSV 210
Query: 330 QKLQ 319
KL+
Sbjct: 211 AKLE 214
>AL590431-9|CAH71267.1| 248|Homo sapiens tropomyosin 3 protein.
Length = 248
Score = 31.9 bits (69), Expect = 1.4
Identities = 23/64 (35%), Positives = 28/64 (43%)
Frame = -1
Query: 510 ESKIVELEEELRVVGNXLKXLXXXXXXXXXXXXXXKNQIKXLPXRXKXXXXXXXXXXRSV 331
ESK ELEEEL+ V N LK L + +IK L + K RSV
Sbjct: 151 ESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSV 210
Query: 330 QKLQ 319
KL+
Sbjct: 211 AKLE 214
>AL590431-3|CAH71261.1| 158|Homo sapiens tropomyosin 3 protein.
Length = 158
Score = 31.9 bits (69), Expect = 1.4
Identities = 23/64 (35%), Positives = 28/64 (43%)
Frame = -1
Query: 510 ESKIVELEEELRVVGNXLKXLXXXXXXXXXXXXXXKNQIKXLPXRXKXXXXXXXXXXRSV 331
ESK ELEEEL+ V N LK L + +IK L + K RSV
Sbjct: 61 ESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSV 120
Query: 330 QKLQ 319
KL+
Sbjct: 121 AKLE 124
>M12127-1|AAA36774.1| 131|Homo sapiens protein ( Human cytoskeletal
tropomyosin isoform (3.0 kb) mRNA, 3' end. ).
Length = 131
Score = 31.5 bits (68), Expect = 1.8
Identities = 22/64 (34%), Positives = 28/64 (43%)
Frame = -1
Query: 510 ESKIVELEEELRVVGNXLKXLXXXXXXXXXXXXXXKNQIKXLPXRXKXXXXXXXXXXRSV 331
ESK +LEEELR V N LK L + +IK L + K R+V
Sbjct: 34 ESKCGDLEEELRTVTNNLKSLEAASEKYSEKEDKYEEEIKLLSDKLKEAETRAEFAERTV 93
Query: 330 QKLQ 319
KL+
Sbjct: 94 AKLE 97
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,820,742
Number of Sequences: 237096
Number of extensions: 763499
Number of successful extensions: 1037
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1037
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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