Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32384
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80839-8|AAB37914.1|  238|Caenorhabditis elegans Hypothetical pr...    36   0.017
U80847-1|AAB37983.2|  738|Caenorhabditis elegans Hypothetical pr...    29   1.5  
U53332-4|ABS83852.1|  215|Caenorhabditis elegans Hypothetical pr...    27   6.0  
U53332-3|ABS83853.1|  218|Caenorhabditis elegans Hypothetical pr...    27   6.0  
Z22180-3|CAA80175.1|  228|Caenorhabditis elegans Hypothetical pr...    27   8.0  

>U80839-8|AAB37914.1|  238|Caenorhabditis elegans Hypothetical
           protein ZC204.10 protein.
          Length = 238

 Score = 35.9 bits (79), Expect = 0.017
 Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
 Frame = -3

Query: 226 DILRLNYYS-VYLLC-SNLKVVDLVQVPLLIDIENFLRNIHECSSSRSSDRVF*CFLGHR 53
           D+  LN++S V LL  S ++V D + +  +  +E  + N+    SS SSD +  CFL ++
Sbjct: 159 DVPLLNFFSSVELLSVSEIRVSDFIIIQNVRSLELHVVNLDYILSSNSSDILLYCFLSNK 218

Query: 52  PDPSSLQKQQQKRSNPK 2
            D + L KQ  K S P+
Sbjct: 219 -DLNLLMKQWIKGSMPR 234


>U80847-1|AAB37983.2|  738|Caenorhabditis elegans Hypothetical
           protein C17H11.2 protein.
          Length = 738

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = +1

Query: 82  CPNFDLNCIREYFSRNSQCQLVRGPVPDPLPLSYYRVDI 198
           C   + N  R+ ++   +CQ++R  VP P P+S   V +
Sbjct: 140 CLEAEENSFRDCYNLYKKCQMLRPGVPVPRPMSLLNVSV 178


>U53332-4|ABS83852.1|  215|Caenorhabditis elegans Hypothetical
           protein F59G1.8a protein.
          Length = 215

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = +1

Query: 331 LASPKTIFKYNRKAKEPIVRSDALEVDYGTLTFTAVFPSISDLQL 465
           L + K +   NR+    I+ SDA E  + T+  +++FP +  LQL
Sbjct: 168 LKTAKILKARNRRQLSSIILSDAHETKFSTIAHSSLFP-LLHLQL 211


>U53332-3|ABS83853.1|  218|Caenorhabditis elegans Hypothetical
           protein F59G1.8b protein.
          Length = 218

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = +1

Query: 331 LASPKTIFKYNRKAKEPIVRSDALEVDYGTLTFTAVFPSISDLQL 465
           L + K +   NR+    I+ SDA E  + T+  +++FP +  LQL
Sbjct: 171 LKTAKILKARNRRQLSSIILSDAHETKFSTIAHSSLFP-LLHLQL 214


>Z22180-3|CAA80175.1|  228|Caenorhabditis elegans Hypothetical
           protein K11H3.2 protein.
          Length = 228

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
 Frame = +1

Query: 151 GPVPDPLPLSYYRVDIPNSNLT-VEYHDVKT-RGFDTI--KIIEFYINSKTEKLVLAA-- 312
           G + DP   + Y++ + NS L  +E   VKT   F  +   IIE   N + E +      
Sbjct: 36  GALKDPKLCAIYKMILQNSALLLIEKSGVKTVEEFQKVFGPIIEEQKNKEDEIIEFEEFE 95

Query: 313 EVQSLK--LASPKTIFKYNRKAKEPIVRS 393
           E++  +  LASP +  KY+    EP+  S
Sbjct: 96  EIEKARAELASPTSFTKYSMMLDEPLSAS 124


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,897,164
Number of Sequences: 27780
Number of extensions: 215115
Number of successful extensions: 587
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 568
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 587
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)