Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32383
(516 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0060 + 20593519-20594667,20594898-20594927,20595237-20595326 29 2.9
03_01_0459 + 3533718-3533916,3535009-3535150,3535290-3535410,353... 29 2.9
02_01_0742 + 5524149-5524214,5524609-5524641,5524750-5524880,552... 29 2.9
10_08_0934 + 21667688-21667860,21667995-21668093,21668528-216687... 28 3.9
05_05_0034 - 21741148-21741275,21741890-21741928,21742007-217421... 28 3.9
02_05_0337 - 28060009-28060716,28061055-28061498,28061732-280617... 28 3.9
09_06_0061 + 20596360-20596618,20597039-20597158,20597329-205974... 28 5.1
08_02_0296 - 15466693-15466878,15467046-15467315 28 5.1
12_02_1149 - 26467252-26468319,26468452-26469147,26469263-264694... 27 6.8
06_03_0467 - 21066354-21066501,21066831-21066893,21067223-210672... 27 6.8
03_02_1023 + 13265179-13265330,13265526-13265637,13265752-132660... 27 6.8
06_01_0692 - 5047162-5047441,5047602-5047726,5048257-5048327,504... 27 8.9
05_05_0030 - 21698625-21698752,21699589-21699627,21699708-216998... 27 8.9
05_04_0251 - 19381397-19381904,19382003-19382157,19382897-193830... 27 8.9
03_03_0249 + 15832086-15833261 27 8.9
01_01_0788 + 6111890-6112002,6112121-6112265,6113012-6113086,611... 27 8.9
>09_06_0060 + 20593519-20594667,20594898-20594927,20595237-20595326
Length = 422
Score = 28.7 bits (61), Expect = 2.9
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 7/106 (6%)
Frame = +3
Query: 87 VMALMEATPETEPCVVSLDGNQAVRLPLME-CVRRTKAVSQAMADKNWDLAV------QL 245
+++++ +T PC + L + + RLPL E V + + A ++ LAV +L
Sbjct: 122 LLSVLSSTASYFPCALHLLRDVSTRLPLPEPLVLASHNLLIEAAARSGHLAVSISLFHRL 181
Query: 246 RGRSFARNLETYKMLTRLKPPKGAFDESGKPSEGLTLAVMHVGAPA 383
R + N ETY++LT+ +G + + L ++H G PA
Sbjct: 182 RSLHVSPNAETYRILTQSLCRRGQV----RTAANLLDEMLHRGIPA 223
>03_01_0459 +
3533718-3533916,3535009-3535150,3535290-3535410,
3535513-3535575,3535677-3535823
Length = 223
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -2
Query: 359 SQRQTFRRFSGFIKRSLWWLQTGQHLICFQI 267
SQ Q FR+ I+R +WW LI F I
Sbjct: 174 SQAQDFRKAGTKIRRKMWWENMKMKLIVFGI 204
>02_01_0742 +
5524149-5524214,5524609-5524641,5524750-5524880,
5525174-5525282,5525406-5525522,5525896-5525961,
5526314-5526376,5526459-5526503,5526690-5526751,
5526974-5527067,5527375-5527467,5527561-5527630,
5527816-5527892,5527976-5528033,5528135-5528166,
5528245-5528376
Length = 415
Score = 28.7 bits (61), Expect = 2.9
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +3
Query: 195 AVSQAMADKNWDLAVQLRGRSFARNLETYKMLTRLKPPKGAFDESGKPS 341
A+ Q D+NW+ A++ +FAR + Y + P AF +SG S
Sbjct: 171 AIRQKGIDENWEAALEHNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQS 219
>10_08_0934 +
21667688-21667860,21667995-21668093,21668528-21668736,
21668786-21668925
Length = 206
Score = 28.3 bits (60), Expect = 3.9
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Frame = +3
Query: 162 LPLMECVRRTKAVSQAMADKNWDLAVQL------RGRSFARNLETYKMLTRLKP 305
L + C + A+ +WDL V+L +G F ++ +T+K + RL+P
Sbjct: 10 LTTLRCATHFSSDESAVIGWDWDLVVRLLVFVYVQGVPFLQSFDTWKFIRRLEP 63
>05_05_0034 -
21741148-21741275,21741890-21741928,21742007-21742121,
21742227-21742292,21743213-21743371,21743573-21743609,
21743757-21744194,21744735-21744817,21744920-21744956,
21745146-21745214,21745316-21745407,21745481-21745565,
21745903-21745982,21746327-21746724,21746813-21747717,
21747825-21747915,21748617-21750680,21750681-21750749,
21750850-21751273,21751644-21751763
Length = 1832
Score = 28.3 bits (60), Expect = 3.9
Identities = 13/30 (43%), Positives = 22/30 (73%)
Frame = -1
Query: 327 IHQTLPLVASNGSTSYMFPNYVQSYDRGAV 238
++QT+P ++S G+T+Y+ PN + Y GAV
Sbjct: 791 LYQTMPSLSSLGATNYL-PNALVPYVGGAV 819
>02_05_0337 -
28060009-28060716,28061055-28061498,28061732-28061793,
28061896-28062007,28062144-28062263
Length = 481
Score = 28.3 bits (60), Expect = 3.9
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +3
Query: 18 HVQRGGSP-SAFDRILGCRMGAEAVMALMEATPETEPCVVSLDGNQA 155
HV GGSP S+ DR GC + L P T+ + + D +A
Sbjct: 211 HVDGGGSPASSVDREDGCLSPSIPTAELAMQAPNTKMSIATTDAKEA 257
>09_06_0061 + 20596360-20596618,20597039-20597158,20597329-20597462,
20597578-20597730,20597816-20597927,20598022-20598352,
20598524-20598737,20598842-20598931,20599669-20599924,
20600029-20600141,20600733-20600831,20600915-20600980,
20601018-20601167,20601278-20601368,20601710-20601749,
20603888-20605247,20605478-20605507,20605834-20605885,
20606264-20606397,20606513-20606665,20607089-20607202
Length = 1356
Score = 27.9 bits (59), Expect = 5.1
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Frame = +3
Query: 87 VMALMEATPETEPCVVSLDGNQAVRLPLME-CVRRTKAVSQAMADKNWDLAV------QL 245
+++++ +T PC + L + + RLPL E V + + A ++ LAV +L
Sbjct: 935 LLSVLSSTASYFPCALHLLRDVSTRLPLPEPLVLASHNLLIEAATRSGHLAVSISLFHRL 994
Query: 246 RGRSFARNLETYKMLTR 296
R + N ETY++LT+
Sbjct: 995 RSLHVSPNAETYRILTQ 1011
>08_02_0296 - 15466693-15466878,15467046-15467315
Length = 151
Score = 27.9 bits (59), Expect = 5.1
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = -3
Query: 244 SC-TARSQ-FLSAIACETAFVRRTHSINGKRTAWLPSSETTHGSVSGVASI 98
SC A++Q + S+ CE A T S+ G WL S+ G+ +G ++
Sbjct: 97 SCGAAKTQLYNSSTFCERAPPNSTPSLGGAEAVWLSSNSRRGGAGAGAGAV 147
>12_02_1149 -
26467252-26468319,26468452-26469147,26469263-26469409,
26470936-26471274
Length = 749
Score = 27.5 bits (58), Expect = 6.8
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +3
Query: 273 ETYKMLTRLKPPKGAFDESGKPSEGLTLAVMHVGAPACGMNAAVRSFVRNCI--YRGDTV 446
E +++ L P G+ + S PS LTL+++ +G P +A+ RS V + GD+V
Sbjct: 140 EEVEIILPLSVPNGSSESS--PSLHLTLSLVELGPPHQSPDASQRSAVTAPLSPSSGDSV 197
Query: 447 LGIHDXIEGFINGNI 491
D + I +
Sbjct: 198 PSSKDEVSSVIKAGL 212
>06_03_0467 -
21066354-21066501,21066831-21066893,21067223-21067291,
21067666-21067742,21069451-21069558,21070008-21070274,
21071964-21072607,21073370-21073550,21073688-21073834
Length = 567
Score = 27.5 bits (58), Expect = 6.8
Identities = 20/69 (28%), Positives = 30/69 (43%)
Frame = -3
Query: 283 LYVSKLRAKLRPRSCTARSQFLSAIACETAFVRRTHSINGKRTAWLPSSETTHGSVSGVA 104
L VSK+ + +PR C A +A A +A RRT S+ + A ++ S
Sbjct: 241 LVVSKIFYQTQPRQCAAAD--AAATASASAVDRRTTSLRDRAAAAAAAAAAAAPMASANV 298
Query: 103 SIKAITASA 77
S+ A A
Sbjct: 299 SVAAFHGGA 307
>03_02_1023 + 13265179-13265330,13265526-13265637,13265752-13266048,
13266361-13266623,13267637-13267847,13268420-13268590,
13268671-13268748,13269275-13269520,13269763-13271868,
13272122-13273904,13274113-13274216,13274752-13275108,
13275210-13275328,13276175-13276436,13276669-13276893,
13277075-13277214,13278087-13278159,13278431-13278532,
13278647-13279018,13279183-13279230,13279516-13279900,
13280440-13280558
Length = 2574
Score = 27.5 bits (58), Expect = 6.8
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = -2
Query: 440 IASVNTIPYKRTYGRIHAAGRRAHVHHSQRQTFRRFSGFIKRSLWWLQTGQHLICFQ 270
+ + N IP+ R YG ++ + + TF FSG + L Q CFQ
Sbjct: 1161 VCAKNDIPFSRLYGSNFTLKAKSLSAYLRDYTFPLFSGTSAKCNGRLVLAQQATCFQ 1217
>06_01_0692 -
5047162-5047441,5047602-5047726,5048257-5048327,
5048453-5048834,5049389-5050126
Length = 531
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -1
Query: 318 TLPLVASNGSTSYMFPNYVQSYDRGAVQLGPNFYQP 211
+L V SNG T M PN V + + A + P+ +P
Sbjct: 3 SLNKVVSNGDTRSMLPNKVTALNPNAAEFVPSCIRP 38
>05_05_0030 -
21698625-21698752,21699589-21699627,21699708-21699822,
21699927-21699992,21701064-21701203,21701424-21701473,
21701608-21702045,21702757-21702839,21702941-21702977,
21703366-21703457,21703531-21703615,21703950-21704029,
21704049-21704105,21704350-21704747,21706322-21707223,
21707331-21707421,21708123-21710273,21710375-21710813,
21711180-21711299
Length = 1836
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = -1
Query: 327 IHQTLPLVASNGSTSYMFPNYVQSYDRGAV 238
+ QT+P ++S G+T+Y+ PN + Y GAV
Sbjct: 802 LSQTMPSLSSLGATNYL-PNALVPYVGGAV 830
>05_04_0251 -
19381397-19381904,19382003-19382157,19382897-19383012,
19383185-19383286,19384321-19384438,19384622-19384735
Length = 370
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = -1
Query: 297 NGSTSYMFPNYVQSYDRGAVQLGPNFYQPLPVRQLSFVERIPL 169
+G T F ++ R +QLG +QP +E IPL
Sbjct: 77 SGETFIFFNKQIKGNKREIIQLGVPLFQPTTEESNCHIEAIPL 119
>03_03_0249 + 15832086-15833261
Length = 391
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +1
Query: 400 PYVRLYGIVFTEAIPCLAFTTALKVSLMGTS 492
P V LYG + A+PCLA VS G +
Sbjct: 154 PLVPLYGRHYVPAVPCLAGNPVFHVSDTGVA 184
>01_01_0788 +
6111890-6112002,6112121-6112265,6113012-6113086,
6114171-6114250,6115500-6115569,6115664-6115759,
6116633-6116756,6116921-6116967,6117044-6117127,
6117199-6117252,6117451-6117551,6118744-6118834,
6119989-6120153,6121341-6121412,6122025-6122111,
6122899-6122952,6122992-6123062,6123882-6124029
Length = 558
Score = 27.1 bits (57), Expect = 8.9
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +3
Query: 162 LPLMECVRRTKAVSQAMADKNWDLAVQLRGRSFARNLETYKM-LTRLKPP 308
+PL C R +AV +A+ + A L GR ++ TY + LK P
Sbjct: 458 IPLTSCDRDMEAVRKAIIAGAFAYACHLEGRFYSHTSPTYSQNVISLKKP 507
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,313,417
Number of Sequences: 37544
Number of extensions: 311997
Number of successful extensions: 1023
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1023
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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