Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32379
(346 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 109 5e-25
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 109 5e-25
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 109 5e-25
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 107 2e-24
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 107 2e-24
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 107 2e-24
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 107 2e-24
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 107 2e-24
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 107 2e-24
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 107 2e-24
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 107 2e-24
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 107 2e-24
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 105 6e-24
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 105 6e-24
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 105 8e-24
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 60 4e-10
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 54 2e-08
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 49 1e-06
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 34 0.031
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 32 0.13
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 32 0.13
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 31 0.17
AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical ... 30 0.51
AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 29 0.68
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 2.1
AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical ... 28 2.1
Z81551-1|CAB04483.2| 335|Caenorhabditis elegans Hypothetical pr... 26 6.3
U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein ... 26 8.3
U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein ... 26 8.3
Z54237-5|CAN86900.1| 273|Caenorhabditis elegans Hypothetical pr... 22 9.8
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 109 bits (262), Expect = 5e-25
Identities = 49/49 (100%), Positives = 49/49 (100%)
Frame = +3
Query: 54 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG 200
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG 49
Score = 105 bits (253), Expect = 6e-24
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = +1
Query: 205 KDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTXYNELRV 345
KDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHT YNELRV
Sbjct: 51 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV 97
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 109 bits (262), Expect = 5e-25
Identities = 49/49 (100%), Positives = 49/49 (100%)
Frame = +3
Query: 54 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG 200
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG 49
Score = 81.0 bits (191), Expect = 2e-16
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +1
Query: 205 KDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKI 312
KDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 51 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 109 bits (262), Expect = 5e-25
Identities = 49/49 (100%), Positives = 49/49 (100%)
Frame = +3
Query: 54 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG 200
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG 49
Score = 75.4 bits (177), Expect = 1e-14
Identities = 32/33 (96%), Positives = 33/33 (100%)
Frame = +1
Query: 205 KDSYVGDEAQSKRGILTLKYPIEHGIITNWDDM 303
KDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDM
Sbjct: 51 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 107 bits (258), Expect = 2e-24
Identities = 48/49 (97%), Positives = 49/49 (100%)
Frame = +3
Query: 54 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG 200
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG 49
Score = 105 bits (253), Expect = 6e-24
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = +1
Query: 205 KDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTXYNELRV 345
KDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHT YNELRV
Sbjct: 51 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV 97
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 107 bits (258), Expect = 2e-24
Identities = 48/49 (97%), Positives = 49/49 (100%)
Frame = +3
Query: 54 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG 200
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG 49
Score = 105 bits (253), Expect = 6e-24
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = +1
Query: 205 KDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTXYNELRV 345
KDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHT YNELRV
Sbjct: 51 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV 97
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 107 bits (258), Expect = 2e-24
Identities = 48/49 (97%), Positives = 49/49 (100%)
Frame = +3
Query: 54 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG 200
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG 49
Score = 105 bits (253), Expect = 6e-24
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = +1
Query: 205 KDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTXYNELRV 345
KDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHT YNELRV
Sbjct: 51 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV 97
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 107 bits (258), Expect = 2e-24
Identities = 48/49 (97%), Positives = 49/49 (100%)
Frame = +3
Query: 54 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG 200
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG 49
Score = 105 bits (253), Expect = 6e-24
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = +1
Query: 205 KDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTXYNELRV 345
KDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHT YNELRV
Sbjct: 51 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV 97
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 107 bits (258), Expect = 2e-24
Identities = 47/49 (95%), Positives = 49/49 (100%)
Frame = +3
Query: 54 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG 200
MCDDDVAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG 49
Score = 105 bits (253), Expect = 6e-24
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = +1
Query: 205 KDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTXYNELRV 345
KDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHT YNELRV
Sbjct: 51 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV 97
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 107 bits (258), Expect = 2e-24
Identities = 48/49 (97%), Positives = 49/49 (100%)
Frame = +3
Query: 54 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG 200
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG 49
Score = 105 bits (253), Expect = 6e-24
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = +1
Query: 205 KDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTXYNELRV 345
KDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHT YNELRV
Sbjct: 51 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV 97
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 107 bits (258), Expect = 2e-24
Identities = 48/49 (97%), Positives = 49/49 (100%)
Frame = +3
Query: 54 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG 200
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG 49
Score = 105 bits (253), Expect = 6e-24
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = +1
Query: 205 KDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTXYNELRV 345
KDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHT YNELRV
Sbjct: 51 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV 97
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 107 bits (258), Expect = 2e-24
Identities = 48/49 (97%), Positives = 49/49 (100%)
Frame = +3
Query: 54 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG 200
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG 49
Score = 81.0 bits (191), Expect = 2e-16
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +1
Query: 205 KDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKI 312
KDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 51 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 107 bits (258), Expect = 2e-24
Identities = 48/49 (97%), Positives = 49/49 (100%)
Frame = +3
Query: 54 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG 200
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG 49
Score = 81.0 bits (191), Expect = 2e-16
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +1
Query: 205 KDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKI 312
KDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 51 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 105 bits (253), Expect = 6e-24
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = +1
Query: 205 KDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTXYNELRV 345
KDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHT YNELRV
Sbjct: 7 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV 53
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 105 bits (253), Expect = 6e-24
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = +1
Query: 205 KDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTXYNELRV 345
KDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHT YNELRV
Sbjct: 37 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV 83
Score = 68.9 bits (161), Expect = 9e-13
Identities = 30/31 (96%), Positives = 31/31 (100%)
Frame = +3
Query: 108 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG 200
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMG
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG 35
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 105 bits (252), Expect = 8e-24
Identities = 44/47 (93%), Positives = 46/47 (97%)
Frame = +1
Query: 205 KDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTXYNELRV 345
KDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHT YNELR+
Sbjct: 50 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRI 96
Score = 98.7 bits (235), Expect = 1e-21
Identities = 43/47 (91%), Positives = 47/47 (100%)
Frame = +3
Query: 60 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG 200
++++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG 48
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 60.1 bits (139), Expect = 4e-10
Identities = 20/38 (52%), Positives = 31/38 (81%)
Frame = +1
Query: 208 DSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHH 321
D ++G +A+S RG+ +++YP+EHGI+ NW DMEKIW +
Sbjct: 54 DIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEY 91
Score = 52.4 bits (120), Expect = 8e-08
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 3/48 (6%)
Frame = +3
Query: 60 DDDVAA---LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 194
D DV A +V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G
Sbjct: 2 DYDVIANQPVVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAG 49
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 54.4 bits (125), Expect = 2e-08
Identities = 26/68 (38%), Positives = 40/68 (58%)
Frame = +1
Query: 121 PATTRPAPSSRPSWVALATRA*WSVWAIKDSYVGDEAQSKRGILTLKYPIEHGIITNWDD 300
PA P+ RP + +T+ ++ IKD VG+E R +L + YP+++GI+ NWDD
Sbjct: 28 PAHIFPSMVGRP--IVRSTQRVGNI-EIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDD 84
Query: 301 MEKIWHHT 324
M +W HT
Sbjct: 85 MAHVWDHT 92
Score = 45.6 bits (103), Expect = 1e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +3
Query: 78 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 170
+VVDNG+G K G+AG + P +FPS+VGRP
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 48.8 bits (111), Expect = 1e-06
Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +1
Query: 208 DSYVGDEAQSKRGI-LTLKYPIEHGIITNWDDMEKIWHHTXYNELR 342
D ++GDEA S T+KYPI HGI+ +WD ME+ W + LR
Sbjct: 64 DFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLR 109
Score = 35.5 bits (78), Expect = 0.010
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 54 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 161
M + A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 33.9 bits (74), Expect = 0.031
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 63 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 161
D+V+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 31.9 bits (69), Expect = 0.13
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 223 DEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHT 324
+E K + ++ PIE G + NWD ++IW T
Sbjct: 49 EECSDKFSLFYVR-PIERGYVVNWDTQQQIWEKT 81
Score = 26.2 bits (55), Expect = 6.3
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +3
Query: 69 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGH 203
+ ++ DNG K G ++PR V P+ + + +H+ V + H
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLV-PNSIVKAKHEKKRVFVAH 46
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 31.9 bits (69), Expect = 0.13
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 223 DEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHT 324
+E K + ++ PIE G + NWD ++IW T
Sbjct: 49 EECSDKFSLFYVR-PIERGYVVNWDTQQQIWEKT 81
Score = 26.2 bits (55), Expect = 6.3
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +3
Query: 69 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGH 203
+ ++ DNG K G ++PR V P+ + + +H+ V + H
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLV-PNSIVKAKHEKKRVFVAH 46
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 31.5 bits (68), Expect = 0.17
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 85 STMAPACARPVSPATTRPAPSSRP 156
+T AP PATTRPAP+S+P
Sbjct: 317 ATRAPPATTRAPPATTRPAPASQP 340
>AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical
protein T08D2.8 protein.
Length = 388
Score = 29.9 bits (64), Expect = 0.51
Identities = 18/36 (50%), Positives = 20/36 (55%)
Frame = +1
Query: 76 RL*STMAPACARPVSPATTRPAPSSRPSWVALATRA 183
RL S +AP A P S A TR APS + VA RA
Sbjct: 231 RLSSAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRA 266
>AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical
protein F59E12.1 protein.
Length = 811
Score = 29.5 bits (63), Expect = 0.68
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -1
Query: 199 PIPTITPWWRGRPTMDGKTARGASSPAKPALHMPEPL 89
P T TP RGRP + ++ P P P+PL
Sbjct: 336 PPATQTPRSRGRPRIHSSASKKTEKPETPRAESPDPL 372
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 2.1
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 108 KAGFAGDDAPRAVFPSIVGRPRHQG 182
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical
protein F54A3.1 protein.
Length = 425
Score = 27.9 bits (59), Expect = 2.1
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +1
Query: 85 STMAPACARPVSPATTRPAPSSRPSWVALATRA 183
S +AP A P S A TR APS + VA RA
Sbjct: 238 SAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRA 270
>Z81551-1|CAB04483.2| 335|Caenorhabditis elegans Hypothetical
protein F56A12.1 protein.
Length = 335
Score = 26.2 bits (55), Expect = 6.3
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +1
Query: 289 NWDDMEKIWHHTXYNE 336
+++D++ IWHH Y E
Sbjct: 172 HYNDLQDIWHHARYKE 187
>U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein 363,
isoform b protein.
Length = 2692
Score = 25.8 bits (54), Expect = 8.3
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 346 RHAAHCXRCGARSSPCHP 293
+HAAH RC A++ C P
Sbjct: 2046 KHAAHAVRCFAKALMCSP 2063
>U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein 363,
isoform a protein.
Length = 2695
Score = 25.8 bits (54), Expect = 8.3
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 346 RHAAHCXRCGARSSPCHP 293
+HAAH RC A++ C P
Sbjct: 2049 KHAAHAVRCFAKALMCSP 2066
>Z54237-5|CAN86900.1| 273|Caenorhabditis elegans Hypothetical
protein T11B7.3b protein.
Length = 273
Score = 22.2 bits (45), Expect(2) = 9.8
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +2
Query: 176 PGRDGRYGPLKTPTWVTRPRAR 241
PGRDG+Y P +++ +R
Sbjct: 246 PGRDGQYCPCPPRSFILAANSR 267
Score = 21.8 bits (44), Expect(2) = 9.8
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +2
Query: 167 PSPPGRDGRYG 199
P PPGR G+ G
Sbjct: 216 PGPPGRPGKVG 226
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,540,945
Number of Sequences: 27780
Number of extensions: 175790
Number of successful extensions: 803
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 802
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 451081596
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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