Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32376
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U27353-1|AAA68610.1|  108|Caenorhabditis elegans rotamase protein.    117   4e-27
AL034393-20|CAA22330.1|  108|Caenorhabditis elegans Hypothetical...   117   4e-27
Z92832-2|CAB07371.1|  431|Caenorhabditis elegans Hypothetical pr...    97   5e-21
Z68760-1|CAA92994.1|  139|Caenorhabditis elegans Hypothetical pr...    92   2e-19
AL034393-19|CAA22328.1|  290|Caenorhabditis elegans Hypothetical...    80   8e-16
AF016430-1|AAB65370.1|  261|Caenorhabditis elegans Fk506-binding...    69   2e-12
U80445-9|AAB37799.1|  264|Caenorhabditis elegans Fk506-binding p...    59   2e-09
U80445-8|AAK68259.1|  300|Caenorhabditis elegans Fk506-binding p...    59   2e-09
Z75554-8|CAA99959.2|  259|Caenorhabditis elegans Hypothetical pr...    58   4e-09
Z35598-2|CAA84651.2|  656|Caenorhabditis elegans Hypothetical pr...    29   1.5  
U23147-4|AAC46689.1|  464|Caenorhabditis elegans Hypothetical pr...    28   3.4  
Z81565-3|CAH60773.1|  489|Caenorhabditis elegans Hypothetical pr...    28   4.6  
Z81565-2|CAB04581.1|  507|Caenorhabditis elegans Hypothetical pr...    28   4.6  

>U27353-1|AAA68610.1|  108|Caenorhabditis elegans rotamase protein.
          Length = 108

 Score =  117 bits (282), Expect = 4e-27
 Identities = 53/76 (69%), Positives = 63/76 (82%)
 Frame = +1

Query: 115 TLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYGQQGHP 294
           TL NGKK DSSRDRG PFKF+IGK EVI+GWD+GVA+MSVGE++KLT S D  YG +G P
Sbjct: 30  TLENGKKIDSSRDRGTPFKFKIGKGEVIKGWDQGVAQMSVGEKSKLTISADLGYGPRGVP 89

Query: 295 GVIPPNSTLIFDVELL 342
             IP N+TL+F+VELL
Sbjct: 90  PQIPANATLVFEVELL 105



 Score = 32.7 bits (71), Expect = 0.16
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +3

Query: 27  MGVTVETISPGDESTYPKSGQTVVVHY 107
           MGV  + +  GD  T PK+GQTV  HY
Sbjct: 1   MGVDRQILVEGDNVTKPKNGQTVTCHY 27


>AL034393-20|CAA22330.1|  108|Caenorhabditis elegans Hypothetical
           protein Y18D10A.19 protein.
          Length = 108

 Score =  117 bits (282), Expect = 4e-27
 Identities = 53/76 (69%), Positives = 63/76 (82%)
 Frame = +1

Query: 115 TLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYGQQGHP 294
           TL NGKK DSSRDRG PFKF+IGK EVI+GWD+GVA+MSVGE++KLT S D  YG +G P
Sbjct: 30  TLENGKKIDSSRDRGTPFKFKIGKGEVIKGWDQGVAQMSVGEKSKLTISADLGYGPRGVP 89

Query: 295 GVIPPNSTLIFDVELL 342
             IP N+TL+F+VELL
Sbjct: 90  PQIPANATLVFEVELL 105



 Score = 32.7 bits (71), Expect = 0.16
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +3

Query: 27  MGVTVETISPGDESTYPKSGQTVVVHY 107
           MGV  + +  GD  T PK+GQTV  HY
Sbjct: 1   MGVDRQILVEGDNVTKPKNGQTVTCHY 27


>Z92832-2|CAB07371.1|  431|Caenorhabditis elegans Hypothetical
           protein F31D4.3 protein.
          Length = 431

 Score = 97.5 bits (232), Expect = 5e-21
 Identities = 45/77 (58%), Positives = 53/77 (68%)
 Frame = +1

Query: 109 LGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYGQQG 288
           +GTL NG KFDSSRDRG  F F +G+  VI+GWD GVA M+ GE A+ T   DY YG  G
Sbjct: 41  VGTLENGTKFDSSRDRGDQFSFNLGRGNVIKGWDLGVATMTKGEVAEFTIRSDYGYGDAG 100

Query: 289 HPGVIPPNSTLIFDVEL 339
            P  IP  +TLIF+VEL
Sbjct: 101 SPPKIPGGATLIFEVEL 117


>Z68760-1|CAA92994.1|  139|Caenorhabditis elegans Hypothetical
           protein F36H1.1 protein.
          Length = 139

 Score = 92.3 bits (219), Expect = 2e-19
 Identities = 44/89 (49%), Positives = 60/89 (67%)
 Frame = +1

Query: 85  DRL*LFITLGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSP 264
           D+L +  T GTL +G +FDSSR R + F F +G+  VI+GWD+G+  M VGER  LT  P
Sbjct: 46  DQLHMHYT-GTLLDGTEFDSSRTRNEEFTFTLGQGNVIKGWDQGLLNMCVGERRILTIPP 104

Query: 265 DYAYGQQGHPGVIPPNSTLIFDVELLRLE 351
              YG++G P  IP NS L FDVEL++++
Sbjct: 105 HLGYGERGAPPKIPGNSVLKFDVELMKID 133


>AL034393-19|CAA22328.1|  290|Caenorhabditis elegans Hypothetical
           protein Y18D10A.25 protein.
          Length = 290

 Score = 80.2 bits (189), Expect = 8e-16
 Identities = 36/63 (57%), Positives = 47/63 (74%)
 Frame = +1

Query: 118 LTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYGQQGHPG 297
           L +G K DSSRDR  PFKF+IGK EVI+GWD+GVA+MSV E++KLT +P + + +   P 
Sbjct: 227 LVDGTKIDSSRDRETPFKFKIGKGEVIKGWDQGVAQMSVKEKSKLTIAPAFGFEKGKLPA 286

Query: 298 VIP 306
            IP
Sbjct: 287 GIP 289



 Score = 54.4 bits (125), Expect = 5e-08
 Identities = 29/66 (43%), Positives = 37/66 (56%)
 Frame = +1

Query: 142 SSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYGQQGHPGVIPPNSTL 321
           S+ +   P  F+IG  EVI G D G+ KM VGE A    S  Y YG+ G  G+IP N++L
Sbjct: 121 SNYESQNPIIFKIGFGEVIPGLDIGIPKMKVGEIATFHVSGKYGYGRAGFRGLIPRNASL 180

Query: 322 IFDVEL 339
              V L
Sbjct: 181 TCKVRL 186



 Score = 27.9 bits (59), Expect = 4.6
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +3

Query: 27  MGVTVETISPGDESTYPKSGQTVVVHY 107
           +GV  + +  GD  T  K+GQTV  HY
Sbjct: 197 IGVDRQILVQGDNVTKSKNGQTVTCHY 223


>AF016430-1|AAB65370.1|  261|Caenorhabditis elegans Fk506-binding
           protein family protein3 protein.
          Length = 261

 Score = 69.3 bits (162), Expect = 2e-12
 Identities = 33/77 (42%), Positives = 46/77 (59%)
 Frame = +1

Query: 118 LTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYGQQGHPG 297
           L +G   DSS  R +PF F++G  +VI+G D  +  M  GE+ K+   P+ AYG+ G P 
Sbjct: 177 LEDGSFIDSSWSRNRPFIFKMGSGQVIKGMDIAMEGMCQGEKRKVVIPPELAYGENGRPP 236

Query: 298 VIPPNSTLIFDVELLRL 348
            IP NS L FD+ L +L
Sbjct: 237 AIPGNSYLHFDLSLEKL 253



 Score = 41.5 bits (93), Expect = 3e-04
 Identities = 22/60 (36%), Positives = 32/60 (53%)
 Frame = +1

Query: 160 KPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVEL 339
           KP+ F +GK EVI G +  +  M VGE+ K+   P+  + + G   V     TL + VEL
Sbjct: 72  KPYTFTLGKGEVIHGMEIAMEGMCVGEQRKVIIPPEQGFDEDGDE-VEGKGETLYYFVEL 130


>U80445-9|AAB37799.1|  264|Caenorhabditis elegans Fk506-binding
           protein family protein5, isoform a protein.
          Length = 264

 Score = 59.3 bits (137), Expect = 2e-09
 Identities = 29/77 (37%), Positives = 41/77 (53%)
 Frame = +1

Query: 118 LTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYGQQGHPG 297
           L +G   DSS  R  PF F++  +EVI+G D  +  M  GER ++    D+ YG  G   
Sbjct: 182 LEDGTFVDSSFSRNAPFIFKLNNNEVIKGMDIAMTGMCEGERRQVVIPSDFGYGDDGRAP 241

Query: 298 VIPPNSTLIFDVELLRL 348
            IP  + L FD+ L +L
Sbjct: 242 AIPGKARLYFDITLEKL 258



 Score = 41.9 bits (94), Expect = 3e-04
 Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
 Frame = +1

Query: 124 NGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYGQQGHP-GV 300
           +GK+  S+ ++ KP+ F +GK +VI G +  +  M  GE+ K+    +  +G +G     
Sbjct: 63  DGKEIGSNFNK-KPYTFTLGKGQVIPGMERAMTGMCKGEKRKVVIPGNLGFGDKGRERDN 121

Query: 301 IPPNSTLIFDVELLRL 348
           I  + TL + V+L+ L
Sbjct: 122 IKEDQTLYYTVQLVDL 137


>U80445-8|AAK68259.1|  300|Caenorhabditis elegans Fk506-binding
           protein family protein5, isoform b protein.
          Length = 300

 Score = 59.3 bits (137), Expect = 2e-09
 Identities = 29/77 (37%), Positives = 41/77 (53%)
 Frame = +1

Query: 118 LTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYGQQGHPG 297
           L +G   DSS  R  PF F++  +EVI+G D  +  M  GER ++    D+ YG  G   
Sbjct: 218 LEDGTFVDSSFSRNAPFIFKLNNNEVIKGMDIAMTGMCEGERRQVVIPSDFGYGDDGRAP 277

Query: 298 VIPPNSTLIFDVELLRL 348
            IP  + L FD+ L +L
Sbjct: 278 AIPGKARLYFDITLEKL 294



 Score = 41.9 bits (94), Expect = 3e-04
 Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
 Frame = +1

Query: 124 NGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYGQQGHP-GV 300
           +GK+  S+ ++ KP+ F +GK +VI G +  +  M  GE+ K+    +  +G +G     
Sbjct: 99  DGKEIGSNFNK-KPYTFTLGKGQVIPGMERAMTGMCKGEKRKVVIPGNLGFGDKGRERDN 157

Query: 301 IPPNSTLIFDVELLRL 348
           I  + TL + V+L+ L
Sbjct: 158 IKEDQTLYYTVQLVDL 173


>Z75554-8|CAA99959.2|  259|Caenorhabditis elegans Hypothetical
           protein ZC455.10 protein.
          Length = 259

 Score = 58.0 bits (134), Expect = 4e-09
 Identities = 29/70 (41%), Positives = 38/70 (54%)
 Frame = +1

Query: 139 DSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYGQQGHPGVIPPNST 318
           DSS  R  PF FR+   EVI G D  +  M  GER ++    +Y YG QG P  IP  + 
Sbjct: 184 DSSYSRNAPFVFRLRNREVIDGMDIAMDGMCEGERRRVVIPSEYGYGSQGSPPEIPGGAR 243

Query: 319 LIFDVELLRL 348
           L F++ L +L
Sbjct: 244 LFFEIVLEKL 253



 Score = 34.7 bits (76), Expect = 0.040
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = +1

Query: 118 LTNGKKFDSSRDRGK-PFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYGQ 282
           LT+ K  +   + GK P+ F +G+++VI G D  +  M +GE  K+   P   + +
Sbjct: 61  LTDEKGVEIGSNFGKKPYTFTLGRNQVIPGMDRAMRGMCIGEIRKVVIPPKLGFAK 116


>Z35598-2|CAA84651.2|  656|Caenorhabditis elegans Hypothetical
           protein F10F2.4 protein.
          Length = 656

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = +2

Query: 65  VDLPQIRTDCSCSLHWEHSRTVKSLTHR 148
           VDL    +    SLHW H RT+KSL  R
Sbjct: 480 VDLDISNSGLEFSLHWRHLRTLKSLILR 507


>U23147-4|AAC46689.1|  464|Caenorhabditis elegans Hypothetical
           protein C18H9.5 protein.
          Length = 464

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
 Frame = +1

Query: 73  TPNQDRL*LFITLGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDE-GVAKMSVGERAK 249
           TPN  +      L T+ +GK F+SS+ R +  KF    +++ + W+   ++   VG    
Sbjct: 225 TPNDHKNVSSTELRTIRDGKIFESSKHRPQNVKF----TQIFKNWEVFEISLAIVGGSTS 280

Query: 250 LTCSPDY 270
           + C  +Y
Sbjct: 281 VICLNNY 287


>Z81565-3|CAH60773.1|  489|Caenorhabditis elegans Hypothetical
           protein K06G5.1b protein.
          Length = 489

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 19/67 (28%), Positives = 29/67 (43%)
 Frame = +1

Query: 115 TLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYGQQGHP 294
           TL NGK  D+S    K   F +  S   + +      + V        SP+  YG  G  
Sbjct: 88  TLYNGKVADNST---KITTFTVADSGTTKSYTSSTQYIYVEYTQDNATSPNAYYGSIGAG 144

Query: 295 GVIPPNS 315
           G++PP++
Sbjct: 145 GLLPPST 151


>Z81565-2|CAB04581.1|  507|Caenorhabditis elegans Hypothetical
           protein K06G5.1a protein.
          Length = 507

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 19/67 (28%), Positives = 29/67 (43%)
 Frame = +1

Query: 115 TLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYGQQGHP 294
           TL NGK  D+S    K   F +  S   + +      + V        SP+  YG  G  
Sbjct: 88  TLYNGKVADNST---KITTFTVADSGTTKSYTSSTQYIYVEYTQDNATSPNAYYGSIGAG 144

Query: 295 GVIPPNS 315
           G++PP++
Sbjct: 145 GLLPPST 151


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,411,073
Number of Sequences: 27780
Number of extensions: 259494
Number of successful extensions: 657
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 626
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 657
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)