Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32376
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    25   0.46 
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    25   0.46 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    24   1.1  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           23   1.9  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   1.9  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   7.5  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   7.5  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    21   10.0 
AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter...    21   10.0 

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 25.0 bits (52), Expect = 0.46
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -2

Query: 194 TSDFPILNLKGLPRSRDESNFLPFVSVPSVMN 99
           + ++  L LKG      ES+ + F+  PSVMN
Sbjct: 288 SEEYSYLRLKGQMLYIPESDLVTFLCYPSVMN 319


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 25.0 bits (52), Expect = 0.46
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -2

Query: 194 TSDFPILNLKGLPRSRDESNFLPFVSVPSVMN 99
           + ++  L LKG      ES+ + F+  PSVMN
Sbjct: 288 SEEYSYLRLKGQMLYIPESDLVTFLCYPSVMN 319


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +1

Query: 235  GERAKLTCSPDYAYGQQGHPGVIPPNST 318
            GER  L  S DY Y  +G  G    +ST
Sbjct: 1579 GERVMLKASEDYRYSVRGLCGNFDHDST 1606


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +1

Query: 172 FRIGKSEVIRGWDEGVAKMSVGERAKLTCSP 264
           FRI   E  R W     K+ + +  KL C P
Sbjct: 249 FRIQVDECDRLWILDSGKVDIAKGGKLACPP 279


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 15/62 (24%), Positives = 26/62 (41%)
 Frame = -2

Query: 359 CIYSRRRSSTSKISVELGGMTPGWPC*P*A*SGEQVNLARSPTDIFATPSSQPRITSDFP 180
           C   R+  S S   +E G   P  P           + + +PT + ++P S+ +   D P
Sbjct: 568 CPRFRKLDSPSDSGIESGTEKPDKPA--------SSSASSAPTSVCSSPRSEDKEVEDMP 619

Query: 179 IL 174
           +L
Sbjct: 620 VL 621


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 115 TLTNGKKFDSSRDRGKPFKFRI 180
           T+ NG   +  R+  KPF  +I
Sbjct: 469 TINNGLLLEEQRNDDKPFLIKI 490


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 115 TLTNGKKFDSSRDRGKPFKFRI 180
           T+ NG   +  R+  KPF  +I
Sbjct: 469 TINNGLLLEEQRNDDKPFLIKI 490


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2

Query: 452 YVIKNNVISCDLEFQRAIDITMML 381
           Y+IKN  I+C ++     D  +M+
Sbjct: 237 YLIKNQTITCPIKVSWRADGQIMV 260


>AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter
           transporter-1A protein.
          Length = 203

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 7/36 (19%), Positives = 15/36 (41%)
 Frame = +3

Query: 291 PWSHTSQLYTYFRCRTSTSRINTICNQKLLQHHCYV 398
           PW   +  +    C     R +  C  ++ +HH ++
Sbjct: 97  PWGSCNNYWNTKNCVNPYDRDSLSCWLQMTKHHNFI 132


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,685
Number of Sequences: 438
Number of extensions: 3231
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)