Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32374
(360 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 218 2e-58
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 124 3e-30
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 100 6e-23
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 73 1e-14
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 65 4e-12
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 64 6e-12
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc... 55 3e-09
SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr... 31 0.054
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po... 27 0.88
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 25 2.7
SPCC1840.12 ||SPCC965.02|OPT oligopeptide transporter family|Sch... 25 3.5
SPBC1683.09c |frp1||ferric-chelate reductase Frp1|Schizosaccharo... 25 3.5
SPAC821.03c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 4.7
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 25 4.7
SPAP27G11.03 |||D123 family|Schizosaccharomyces pombe|chr 1|||Ma... 24 6.2
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 24 6.2
SPBC1289.01c |chr4|cfh3, SPBC1539.11c|chitin synthase regulatory... 24 8.2
SPCC1827.07c ||SPCP1E11.01c|SPX/EXS domain protein|Schizosacchar... 24 8.2
SPAC637.12c |mst1||histone acetyltransferase Mst1|Schizosaccharo... 24 8.2
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 218 bits (532), Expect = 2e-58
Identities = 94/106 (88%), Positives = 101/106 (95%)
Frame = +1
Query: 43 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 222
++++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRH G+MVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGIMVGMGQKDSYVGDEAQSK 61
Query: 223 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVXPEEHPVLFTE 360
RGILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRV PEEHP L TE
Sbjct: 62 RGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPCLLTE 107
>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 124 bits (300), Expect = 3e-30
Identities = 56/105 (53%), Positives = 74/105 (70%), Gaps = 1/105 (0%)
Frame = +1
Query: 49 DVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 228
D + +DNGSG KAGFAGDD P+ +FP+ VGR +H+ VM QKD +VG EAQ+ RG
Sbjct: 8 DNQPICIDNGSGFIKAGFAGDDIPKCLFPTCVGRIKHERVMPSSIQKDMFVGSEAQNLRG 67
Query: 229 ILTLKYPIEHGIITNWDDMEKIWHHTFYN-ELRVXPEEHPVLFTE 360
+L ++ PIE GII NW DME+IW + + + +L PEEHP+L TE
Sbjct: 68 LLKIQRPIERGIIQNWSDMEEIWSYIYSDQQLNTLPEEHPLLLTE 112
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 100 bits (240), Expect = 6e-23
Identities = 46/104 (44%), Positives = 71/104 (68%), Gaps = 2/104 (1%)
Frame = +1
Query: 55 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRG 228
A +V+DNG+G K G+A D+ PR FPSIVGRP R + + KD VGDEA++ R
Sbjct: 4 APIVLDNGTGFVKVGYAKDNFPRFQFPSIVGRPILRAEEKTGNVQIKDVMVGDEAEAVRS 63
Query: 229 ILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVXPEEHPVLFTE 360
+L +KYP+E+GII ++++M ++W +TF+ +L++ P +L TE
Sbjct: 64 LLQVKYPMENGIIRDFEEMNQLWDYTFFEKLKIDPRGRKILLTE 107
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 72.9 bits (171), Expect = 1e-14
Identities = 44/124 (35%), Positives = 62/124 (50%), Gaps = 24/124 (19%)
Frame = +1
Query: 61 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG---------MGQK-------- 189
+++DNG+G K G+AG+DAP VFP+++ R G G M K
Sbjct: 8 IIMDNGTGYSKLGYAGNDAPSYVFPTVIAT-RSAGASSGPAVSSKPSYMASKGSGHLSSK 66
Query: 190 ------DSYVGDEAQSKRGI-LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVXPEEHPV 348
D ++G++A K +L YPI HG I NWD ME+ W + + LR PE+H
Sbjct: 67 RATEDLDFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYF 126
Query: 349 LFTE 360
L TE
Sbjct: 127 LLTE 130
>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 64.9 bits (151), Expect = 4e-12
Identities = 35/105 (33%), Positives = 56/105 (53%)
Frame = +1
Query: 46 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 225
D+V+A+V+D GS + GF+G+D P+ V PS G + G + Y+ +S
Sbjct: 9 DEVSAIVIDPGSKWTRIGFSGEDIPKCVLPSYCGEFSDGRRLFG----EEYI---YKSNP 61
Query: 226 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVXPEEHPVLFTE 360
G + +K I +G + NWD +W + +L+ P EHP+L TE
Sbjct: 62 G-MEIKNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHPILITE 105
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 64.1 bits (149), Expect = 6e-12
Identities = 36/111 (32%), Positives = 64/111 (57%), Gaps = 1/111 (0%)
Frame = +1
Query: 31 FKMCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE 210
F+ +D+ LV+DNGS +AG+ G+ P+ VF ++V R R + + + + VG++
Sbjct: 18 FQNVSNDIP-LVIDNGSWQLRAGWGGEKDPKLVFDNLVSRYRDR----KLSRTSTLVGND 72
Query: 211 AQSKRGILTL-KYPIEHGIITNWDDMEKIWHHTFYNELRVXPEEHPVLFTE 360
+ G ++ + P E +I+NWD ME++ +TF +L + EHP+ TE
Sbjct: 73 TLIEVGSRSIARSPFERNVISNWDLMEQVLDYTFL-KLGIDRMEHPICMTE 122
>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
Arp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 55.2 bits (127), Expect = 3e-09
Identities = 31/107 (28%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Frame = +1
Query: 46 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 225
+++ +LV+D GS + G+AG+++P + PS + GV + ++ YV DE Q
Sbjct: 8 EEIPSLVIDPGSCWTRFGYAGEESPMTILPS------YYGVRSDVTGRNKYVVDELQIHA 61
Query: 226 GI--LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVXPEEHPVLFTE 360
I + +K +GII +W+ W +L+V P E+ ++ TE
Sbjct: 62 PIPGMEVKNGKSNGIIQDWESTLYTWERGLKEKLQVNPTEYAMMITE 108
>SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1517
Score = 31.1 bits (67), Expect = 0.054
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +1
Query: 106 GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 249
G+ PRA F ++ P H G+++ M KD G+E S +G + + P
Sbjct: 502 GNQNPRATFVPLLCLPEHGGMVISM--KDWIGGEEFMSPKGFKSPRTP 547
>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 401
Score = 27.1 bits (57), Expect = 0.88
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Frame = +1
Query: 61 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 240
+V+DNG+ KAGFAG P+ + R + G + ++G+E + TL
Sbjct: 8 IVLDNGAYHIKAGFAGGKV--VEIPNCLTRSKD-------GNR-LFLGNELANCNDFTTL 57
Query: 241 KYPIEH--GIITNWDDMEKIW 297
++ H G + +W +W
Sbjct: 58 QFRRAHEKGYLVHWSTETAVW 78
>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
Arp9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 523
Score = 25.4 bits (53), Expect = 2.7
Identities = 6/21 (28%), Positives = 13/21 (61%)
Frame = +1
Query: 247 PIEHGIITNWDDMEKIWHHTF 309
PI+ G + +W+ ++ W H +
Sbjct: 113 PIQRGRVVDWEALKAFWKHLY 133
>SPCC1840.12 ||SPCC965.02|OPT oligopeptide transporter
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 791
Score = 25.0 bits (52), Expect = 3.5
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -2
Query: 302 WCQIFS-MSSQLVMIPCSMGYFRVRIPLLL-WASSPT*ESFWPIPTITPWW 156
WC+ S + SQ+ + +G F PL L WA + + P ITPWW
Sbjct: 304 WCKPSSAVLSQIFGVKTGLGLF----PLTLDWAQISSLSN----PLITPWW 346
>SPBC1683.09c |frp1||ferric-chelate reductase
Frp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 564
Score = 25.0 bits (52), Expect = 3.5
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 166 VMVGMGQKDSYVGDEAQSKRGILTLKYPI 252
+M+G +Y+G AQ KR +LT + I
Sbjct: 165 IMIGAIHGFAYIGLAAQGKRALLTARVTI 193
>SPAC821.03c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 485
Score = 24.6 bits (51), Expect = 4.7
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 5/56 (8%)
Frame = +1
Query: 73 NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG-----QKDSYVGDEAQSKR 225
N +GM + R F S VG + VG Q+DSY+ D++ S+R
Sbjct: 318 NATGMYGVSKGHSSSTRRPFFSDVGSSQPAEEFVGSSSSHGRQQDSYIADDSDSER 373
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 24.6 bits (51), Expect = 4.7
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -1
Query: 270 GDDTVLDGVLQSEDTSLALGLVTHVGVFLAHTDHH 166
GDD+VLD V +D L L AH D H
Sbjct: 676 GDDSVLDTVTAGKDVYAFLNLFFAKFPQYAHLDFH 710
>SPAP27G11.03 |||D123 family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 319
Score = 24.2 bits (50), Expect = 6.2
Identities = 8/31 (25%), Positives = 17/31 (54%)
Frame = +1
Query: 244 YPIEHGIITNWDDMEKIWHHTFYNELRVXPE 336
YP G++ +W ++E + E+R+ P+
Sbjct: 244 YPRTDGLLFSWSELESMNSENMKPEIRLIPK 274
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 24.2 bits (50), Expect = 6.2
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 149 RPTMDGKTARGASSPAKPALHMPEPL 72
RP+ DG+ A G A P++ P P+
Sbjct: 950 RPSNDGRKASGPRPAAPPSIPPPLPV 975
>SPBC1289.01c |chr4|cfh3, SPBC1539.11c|chitin synthase regulatory
factor |Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 23.8 bits (49), Expect = 8.2
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1
Query: 303 VVPDLLHVIPVGDDTVLDGVLQSED 229
VV DL +PV D+ LD + +ED
Sbjct: 192 VVADLPFPLPVSDEEQLDWIRANED 216
>SPCC1827.07c ||SPCP1E11.01c|SPX/EXS domain
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 682
Score = 23.8 bits (49), Expect = 8.2
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = -1
Query: 120 GRVVAGETGLAHAGAIVDYKRSNIVVA 40
G+V+ G++ A A DYK+ ++A
Sbjct: 4 GKVIEGQSVAEWASAYFDYKKGKKIIA 30
>SPAC637.12c |mst1||histone acetyltransferase
Mst1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 463
Score = 23.8 bits (49), Expect = 8.2
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 68 STMAPACARPVSPATTRPAPSS 133
S AP+ P +P+T +P PS+
Sbjct: 107 SITAPSKTEPSTPSTEKPEPST 128
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,532,708
Number of Sequences: 5004
Number of extensions: 30295
Number of successful extensions: 111
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 106
length of database: 2,362,478
effective HSP length: 65
effective length of database: 2,037,218
effective search space used: 110009772
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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