Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32366
         (315 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF047657-7|AAK18943.1|  424|Caenorhabditis elegans Hypothetical ...    32   0.100
Z49938-5|CAD31752.1| 1467|Caenorhabditis elegans Hypothetical pr...    25   8.7  
Z49938-4|CAA90189.3| 2180|Caenorhabditis elegans Hypothetical pr...    25   8.7  
Z49938-1|CAD59171.1| 1216|Caenorhabditis elegans Hypothetical pr...    25   8.7  
Z46811-2|CAD31753.1| 1467|Caenorhabditis elegans Hypothetical pr...    25   8.7  
Z46811-1|CAA86842.3| 2180|Caenorhabditis elegans Hypothetical pr...    25   8.7  
AL032618-2|CAA21485.1|  640|Caenorhabditis elegans Hypothetical ...    25   8.7  
AF316540-1|AAK01633.1| 1487|Caenorhabditis elegans PTP-3B protein.     25   8.7  
AF316539-1|AAK01632.1| 2200|Caenorhabditis elegans PTP-3A protein.     25   8.7  

>AF047657-7|AAK18943.1|  424|Caenorhabditis elegans Hypothetical
           protein F37B4.7 protein.
          Length = 424

 Score = 31.9 bits (69), Expect = 0.100
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +2

Query: 23  IDWRKGVRRSLSQNDVMSYFMEDVDLNTYMYYLHM 127
           ++W++   + L  N+V     E VD ++YM YL M
Sbjct: 183 VEWKEAYEKKLEDNNVQGNLKEIVDQSSYMDYLRM 217


>Z49938-5|CAD31752.1| 1467|Caenorhabditis elegans Hypothetical protein
            C09D8.1b protein.
          Length = 1467

 Score = 25.4 bits (53), Expect = 8.7
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 151  RRIRHKQGASWRDHDVRQPATP 216
            R I+H Q  +W DH V    TP
Sbjct: 1066 REIKHLQYTAWPDHGVPDHPTP 1087


>Z49938-4|CAA90189.3| 2180|Caenorhabditis elegans Hypothetical protein
            C09D8.1a protein.
          Length = 2180

 Score = 25.4 bits (53), Expect = 8.7
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 151  RRIRHKQGASWRDHDVRQPATP 216
            R I+H Q  +W DH V    TP
Sbjct: 1779 REIKHLQYTAWPDHGVPDHPTP 1800


>Z49938-1|CAD59171.1| 1216|Caenorhabditis elegans Hypothetical
           protein C09D8.1c protein.
          Length = 1216

 Score = 25.4 bits (53), Expect = 8.7
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 151 RRIRHKQGASWRDHDVRQPATP 216
           R I+H Q  +W DH V    TP
Sbjct: 815 REIKHLQYTAWPDHGVPDHPTP 836


>Z46811-2|CAD31753.1| 1467|Caenorhabditis elegans Hypothetical protein
            C09D8.1b protein.
          Length = 1467

 Score = 25.4 bits (53), Expect = 8.7
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 151  RRIRHKQGASWRDHDVRQPATP 216
            R I+H Q  +W DH V    TP
Sbjct: 1066 REIKHLQYTAWPDHGVPDHPTP 1087


>Z46811-1|CAA86842.3| 2180|Caenorhabditis elegans Hypothetical protein
            C09D8.1a protein.
          Length = 2180

 Score = 25.4 bits (53), Expect = 8.7
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 151  RRIRHKQGASWRDHDVRQPATP 216
            R I+H Q  +W DH V    TP
Sbjct: 1779 REIKHLQYTAWPDHGVPDHPTP 1800


>AL032618-2|CAA21485.1|  640|Caenorhabditis elegans Hypothetical
           protein Y42A5A.2 protein.
          Length = 640

 Score = 25.4 bits (53), Expect = 8.7
 Identities = 14/57 (24%), Positives = 27/57 (47%)
 Frame = +2

Query: 83  MEDVDLNTYMYYLHMNYPFWMTDDAYGINKERRGEIMMYANQQLLARMRLERLSHKM 253
           M  V +++   Y H+N  F+  +  +GI K    E+++ AN   + R   E    ++
Sbjct: 116 MNGVLIHSICSYRHLNVTFYTLNTQFGIGK---SEVLIDANMTEMERKMSEMTDRRI 169


>AF316540-1|AAK01633.1| 1487|Caenorhabditis elegans PTP-3B protein.
          Length = 1487

 Score = 25.4 bits (53), Expect = 8.7
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 151  RRIRHKQGASWRDHDVRQPATP 216
            R I+H Q  +W DH V    TP
Sbjct: 1086 REIKHLQYTAWPDHGVPDHPTP 1107


>AF316539-1|AAK01632.1| 2200|Caenorhabditis elegans PTP-3A protein.
          Length = 2200

 Score = 25.4 bits (53), Expect = 8.7
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 151  RRIRHKQGASWRDHDVRQPATP 216
            R I+H Q  +W DH V    TP
Sbjct: 1799 REIKHLQYTAWPDHGVPDHPTP 1820


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,487,484
Number of Sequences: 27780
Number of extensions: 104887
Number of successful extensions: 234
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 228
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 234
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 355337994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)