Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32358
(516 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0724 - 5415218-5415280,5415398-5415523,5415614-5415710,541... 122 1e-28
06_03_1146 - 28004896-28005554,28005664-28005844 33 0.18
10_08_0577 + 18894171-18894917 31 0.42
02_05_1304 + 35581172-35581345,35582504-35582748,35583148-355838... 31 0.73
05_03_0458 + 14280953-14281866,14281964-14282912 30 0.96
05_01_0344 - 2699464-2699520,2699788-2699939,2700592-2701039 29 1.7
10_08_1018 + 22298098-22298691 29 2.2
09_04_0071 - 14313737-14315091,14316131-14316207,14316604-143167... 29 2.9
08_01_1034 - 10482670-10483400,10483442-10483964 29 2.9
07_03_1359 - 25985936-25986083,25986424-25986782,25987026-259871... 29 2.9
01_06_1469 - 37578597-37578700,37578893-37579019,37579177-375792... 29 2.9
07_03_0756 - 21272122-21272784 28 3.9
09_04_0512 + 18226981-18227143,18227648-18229555,18229649-182302... 28 5.1
06_03_0470 - 21113186-21114183,21114273-21115824 28 5.1
11_08_0022 + 27733247-27733935,27735722-27735981,27736213-277364... 27 6.8
03_01_0009 - 89127-89924,90090-90518,90582-90716,91102-91382,916... 27 6.8
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 27 6.8
01_06_0453 + 29501600-29502403 27 6.8
01_01_0650 - 4948852-4950012 27 6.8
08_01_0441 + 3890231-3890845,3891253-3894220,3906625-3906713,390... 27 8.9
05_03_0074 + 8095355-8096575,8096664-8096901,8096990-8097667,809... 27 8.9
02_03_0388 + 18429538-18430598,18430971-18431081,18431165-184312... 27 8.9
>02_01_0724 -
5415218-5415280,5415398-5415523,5415614-5415710,
5415797-5415861,5415964-5416026,5416127-5416197,
5416430-5416489,5416564-5416663,5416863-5416938,
5417284-5417358,5417451-5417575,5417664-5417722,
5418031-5418109,5418303-5418533
Length = 429
Score = 122 bits (295), Expect = 1e-28
Identities = 53/116 (45%), Positives = 76/116 (65%)
Frame = +1
Query: 25 IQTEKSPVVTTVCRSNYRYMYWTVKQQLAQQTVTGCNLRPGDLLGSGTISGEAADSFGSM 204
I+ ++ + V +SN++++YWT+ QQLA TV GCNLRPGD+ +GT+SG +S G +
Sbjct: 316 IKPKEQSEPSMVAKSNFKHLYWTLTQQLAHHTVNGCNLRPGDMFATGTLSGPETESLGCL 375
Query: 205 LELSWKGTKPVRLSTGEERKFIQDGDTVTLRGHCLNATGLRIGFGRCEGKLLPAIP 372
LEL+W G K + + RKF++DGD V L C G +GFG C GK+LPA+P
Sbjct: 376 LELTWNGQKEISVG-NSTRKFLEDGDEVILTA-CCKGEGYNVGFGTCTGKVLPALP 429
>06_03_1146 - 28004896-28005554,28005664-28005844
Length = 279
Score = 32.7 bits (71), Expect = 0.18
Identities = 20/75 (26%), Positives = 31/75 (41%)
Frame = -2
Query: 350 PSHLPNPILSPVALRQWPRNVTVSPSCMNFLSSPVERRTGLVPFQDNSNMLPKESAASPL 171
P +P+P SP + +++PS + SP + + P + P A
Sbjct: 154 PVPMPSPASSPPSPAPAAATPSLAPSPVATTPSPSPSVSPMAPAPAPTTSTPSSPPAPAA 213
Query: 170 MVPEPSKSPGLRLQP 126
M P PS +PG QP
Sbjct: 214 MAPSPSTTPGGVAQP 228
>10_08_0577 + 18894171-18894917
Length = 248
Score = 31.5 bits (68), Expect = 0.42
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = -1
Query: 195 ERVRRLPADGARAEQVSRSEVAARDSLLRQLLFHR 91
E+VRR A+ AR EQ+ R V RDS LR R
Sbjct: 24 EKVRRDEAEAAREEQLQREAVRRRDSDLRLAALRR 58
>02_05_1304 +
35581172-35581345,35582504-35582748,35583148-35583829,
35583908-35584262,35584558-35584649,35584889-35585083,
35585167-35585840,35586134-35586224
Length = 835
Score = 30.7 bits (66), Expect = 0.73
Identities = 17/37 (45%), Positives = 17/37 (45%)
Frame = +2
Query: 263 NSYRTETRSHCAATASTRPDSE*GSGDARGNYYRPYL 373
N TETRSH AA TRPD DA P L
Sbjct: 620 NREPTETRSHAAAVTPTRPDEVILKDDASNKTVAPSL 656
>05_03_0458 + 14280953-14281866,14281964-14282912
Length = 620
Score = 30.3 bits (65), Expect = 0.96
Identities = 21/64 (32%), Positives = 28/64 (43%)
Frame = -2
Query: 296 RNVTVSPSCMNFLSSPVERRTGLVPFQDNSNMLPKESAASPLMVPEPSKSPGLRLQPVTV 117
RN SP N S+P T VP + P S +SP +P +P L P T+
Sbjct: 27 RNAAPSPPSSN--STPTSSTTPTVPPSLTTTSSPSSSPSSPPPLPPLQPTPP-PLPPTTL 83
Query: 116 CCAS 105
C+S
Sbjct: 84 SCSS 87
>05_01_0344 - 2699464-2699520,2699788-2699939,2700592-2701039
Length = 218
Score = 29.5 bits (63), Expect = 1.7
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 182 RRTLSEACWNCPGRAPSPFAFRLVR-RGNSYRTETRSHCAATASTRPDSE 328
R T S A PG R VR RGN ++ RSHC+ +A P SE
Sbjct: 15 RNTRSRATRRQPGLQE---LLRTVRGRGNEQDSKGRSHCSRSAPASPSSE 61
>10_08_1018 + 22298098-22298691
Length = 197
Score = 29.1 bits (62), Expect = 2.2
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Frame = -2
Query: 356 SFPSHLPNPILSPVALRQWPRNVTVSPSCMNFLSSPVERRTGLVPFQDN--SNMLPKESA 183
SFP+ LP IL + L ++ + ++FLS + RR L+ ++ S+ + +S+
Sbjct: 29 SFPTLLPVFILFVLLLCFL--SIFLVRDLLHFLSLCLRRRRLLLRHGEDHDSSSVSMQSS 86
Query: 182 ASPLMVPEPSKSPGL 138
ASP+ P K PGL
Sbjct: 87 ASPINAQAPRKPPGL 101
>09_04_0071 -
14313737-14315091,14316131-14316207,14316604-14316725,
14316838-14316924,14317000-14317066,14317135-14317290,
14318689-14318837
Length = 670
Score = 28.7 bits (61), Expect = 2.9
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = -2
Query: 332 PILSPVALRQWPRNVTVSPSCMNFLSSPVERRTGLVPFQDNSNMLPKESAASPLMVPEPS 153
P L V + V SP C + +P +VPF +M+P +SA P + +P+
Sbjct: 602 PCLEIVVSTPSEQVVNQSPGCQSQSPAPY---LAIVPFDAAHDMVPLQSADPPGLTDDPT 658
Query: 152 KSPGL 138
+ G+
Sbjct: 659 ITSGI 663
>08_01_1034 - 10482670-10483400,10483442-10483964
Length = 417
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 289 TLRGHCLNATGLRIGFGRCEGKLLPAIPFQE 381
+L+ L++ GLRIGFG G+LL P E
Sbjct: 314 SLKNLYLSSDGLRIGFGDVSGRLLRRCPAVE 344
>07_03_1359 -
25985936-25986083,25986424-25986782,25987026-25987153,
25987609-25987727,25988253-25988320
Length = 273
Score = 28.7 bits (61), Expect = 2.9
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 10/60 (16%)
Frame = +3
Query: 192 FRKHVGIVLEGHQARSPFDW*-------GEEIHTGRRHG---HIARPLPQRDRTQNRVRE 341
F + + +++E H A +P + E+ + HG H+ RP P +D QNR R+
Sbjct: 176 FPQQLPVIIEQHYAATPRELQLFPESATSEDSEPSQEHGISDHVTRPQPSKDAWQNRSRD 235
>01_06_1469 -
37578597-37578700,37578893-37579019,37579177-37579274,
37579373-37579540,37579872-37579981,37580072-37580124,
37581131-37581250
Length = 259
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = -2
Query: 218 QDNSNMLPKESAASPLMVPEPSKSPGLRLQPVTVCCASCCFTVQ 87
++ S +P AA + +P+KSP P T +CC +Q
Sbjct: 4 KEESTSIPLSQAAEAVDPEDPAKSPPRPSSPTTSTRKACCAVLQ 47
>07_03_0756 - 21272122-21272784
Length = 220
Score = 28.3 bits (60), Expect = 3.9
Identities = 18/38 (47%), Positives = 19/38 (50%)
Frame = -1
Query: 228 GALPGQFQHASERVRRLPADGARAEQVSRSEVAARDSL 115
GA G Q RVRR ADGAR + R V R SL
Sbjct: 52 GARAGPLQQG--RVRRAGADGARRRRAGRVRVRVRLSL 87
>09_04_0512 +
18226981-18227143,18227648-18229555,18229649-18230295,
18230710-18231949,18232085-18232419,18232500-18232577,
18232872-18232978,18233020-18233062
Length = 1506
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -2
Query: 212 NSNMLPKESAASPLMVPEPSKSPGLRLQPVTVCCAS 105
NS P SAASP ++P + G QP CC S
Sbjct: 524 NSQCSPSRSAASPDLLPLRLVNSGDVYQPSFSCCKS 559
>06_03_0470 - 21113186-21114183,21114273-21115824
Length = 849
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = -2
Query: 272 CMNFLSS---PVERRTGLVPFQDNSNMLPKESAASPLM 168
C+ F++ PVER GLV +D +++ KE+ S LM
Sbjct: 362 CLRFVNKAGQPVERFLGLVHVEDTTSLTLKEAIKSLLM 399
>11_08_0022 +
27733247-27733935,27735722-27735981,27736213-27736404,
27737695-27738686
Length = 710
Score = 27.5 bits (58), Expect = 6.8
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -3
Query: 133 CSP*QSAAPVAVSPSNTCTDSSNGK 59
CS AP VSP++ C +++NG+
Sbjct: 269 CSSTSRVAPACVSPNSYCVNTTNGQ 293
>03_01_0009 -
89127-89924,90090-90518,90582-90716,91102-91382,
91634-91809,91899-92011,92157-92278,92375-92594
Length = 757
Score = 27.5 bits (58), Expect = 6.8
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +2
Query: 251 VRRGNSYRTETRSHC-AATASTRPDSE*GSGDARGNYYRPYLSKNEIYI 394
V +GNSY T T AT+S + + GSG A G Y+ YL+ + + I
Sbjct: 428 VLQGNSYSTFTWEEIDNATSSFADNLKIGSG-ANGTVYKGYLNHSAVAI 475
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 27.5 bits (58), Expect = 6.8
Identities = 19/51 (37%), Positives = 23/51 (45%)
Frame = +2
Query: 215 PGRAPSPFAFRLVRRGNSYRTETRSHCAATASTRPDSE*GSGDARGNYYRP 367
P R+PSP + VRRG + T S S PD G RG+ RP
Sbjct: 646 PSRSPSPDGSKRVRRGRGF-THRYSFARQYRSPSPDHSFRYG-GRGDRDRP 694
>01_06_0453 + 29501600-29502403
Length = 267
Score = 27.5 bits (58), Expect = 6.8
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +2
Query: 161 RAPSAGRRRTLS-EACWNCPGRAPSPFAFRLVRRGNSYRTETRSHCAATAST 313
RAP+ +R+ L + P RAP+P R V+ ET ATAS+
Sbjct: 181 RAPAQAQRQVLQVQRAQPPPPRAPAPAPARAVKSAAREEVETAQVGLATASS 232
>01_01_0650 - 4948852-4950012
Length = 386
Score = 27.5 bits (58), Expect = 6.8
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Frame = -2
Query: 353 FPSHLPNPILSPVALRQWPRNVTVSPSCMNFLSSPVERRTGLVPFQDNSNMLPKESAASP 174
F +H P+ + A + PR+V SP ++ SP+ RR + + M S S
Sbjct: 169 FFAHTPDQLRVLPAQQSSPRSVASSPLAESYDGSPL-RRQAFESYLTKTIM--SSSPTST 225
Query: 173 LMVP---EPSKSPGL 138
LM P PS+SP L
Sbjct: 226 LMSPPKSPPSESPPL 240
>08_01_0441 +
3890231-3890845,3891253-3894220,3906625-3906713,
3908317-3908337
Length = 1230
Score = 27.1 bits (57), Expect = 8.9
Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 8/86 (9%)
Frame = -2
Query: 365 AGNSFPSHLPNPILSPVALRQWPRNVTVSP-SCMN-------FLSSPVERRTGLVPFQDN 210
AGN+ + P P+ +PV + R P C N P RR +VP Q N
Sbjct: 498 AGNNIRNQAPRPVAAPVQQQPAKREQGSKPVVCFNCGDPGHYADKCPKPRRVKVVPAQSN 557
Query: 209 SNMLPKESAASPLMVPEPSKSPGLRL 132
S + ++ + + E +P + L
Sbjct: 558 SAVPASKARVNHVAAAEAQDAPDVIL 583
>05_03_0074 +
8095355-8096575,8096664-8096901,8096990-8097667,
8097787-8097974
Length = 774
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -2
Query: 269 MNFLSSPVERRTGLVPFQDNSNMLPKESAASPLM 168
+N PVER GLV +D +++ KE+ S L+
Sbjct: 366 VNMTGQPVERFLGLVHVEDTTSLTLKEAIKSLLI 399
>02_03_0388 +
18429538-18430598,18430971-18431081,18431165-18431237,
18431513-18431695
Length = 475
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/58 (20%), Positives = 23/58 (39%)
Frame = -2
Query: 296 RNVTVSPSCMNFLSSPVERRTGLVPFQDNSNMLPKESAASPLMVPEPSKSPGLRLQPV 123
+ +++ PS NF + D L K S+ VP+ + P ++P+
Sbjct: 181 KKISIDPSVKNFFRGMSAPAKEAIKLSDYERTLKKASSGKSKPVPQLGEQPNQEIEPL 238
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,319,919
Number of Sequences: 37544
Number of extensions: 347330
Number of successful extensions: 1188
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1186
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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