Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32352
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 345 2e-95
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 345 2e-95
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 344 2e-95
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 344 2e-95
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 344 2e-95
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 344 2e-95
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 343 3e-95
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 343 3e-95
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 343 3e-95
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 343 3e-95
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 322 7e-89
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 198 3e-51
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 196 8e-51
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 116 1e-26
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 90 8e-19
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 66 2e-11
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 66 2e-11
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 64 6e-11
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 32 0.28
AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical ... 31 0.37
U80448-9|AAB37822.2| 577|Caenorhabditis elegans Hypothetical pr... 29 2.0
AY349016-1|AAQ55496.1| 394|Caenorhabditis elegans NHR-41 protein. 27 8.0
AY349015-1|AAQ55495.1| 459|Caenorhabditis elegans NHR-41B protein. 27 8.0
AY349014-1|AAQ55494.1| 583|Caenorhabditis elegans NHR-41A protein. 27 8.0
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 345 bits (847), Expect = 2e-95
Identities = 163/171 (95%), Positives = 169/171 (98%)
Frame = +3
Query: 3 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 182
ETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRD
Sbjct: 126 ETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRD 185
Query: 183 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPD 362
LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPD
Sbjct: 186 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPD 245
Query: 363 GQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYA 515
GQVIT+GNERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYA
Sbjct: 246 GQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYA 296
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 345 bits (847), Expect = 2e-95
Identities = 163/171 (95%), Positives = 169/171 (98%)
Frame = +3
Query: 3 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 182
ETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRD
Sbjct: 126 ETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRD 185
Query: 183 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPD 362
LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPD
Sbjct: 186 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPD 245
Query: 363 GQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYA 515
GQVIT+GNERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYA
Sbjct: 246 GQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYA 296
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 344 bits (846), Expect = 2e-95
Identities = 162/171 (94%), Positives = 169/171 (98%)
Frame = +3
Query: 3 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 182
ETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRD
Sbjct: 126 ETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRD 185
Query: 183 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPD 362
LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPD
Sbjct: 186 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPD 245
Query: 363 GQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYA 515
GQVIT+GNERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYA
Sbjct: 246 GQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYA 296
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 344 bits (846), Expect = 2e-95
Identities = 162/171 (94%), Positives = 169/171 (98%)
Frame = +3
Query: 3 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 182
ETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRD
Sbjct: 82 ETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRD 141
Query: 183 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPD 362
LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPD
Sbjct: 142 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPD 201
Query: 363 GQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYA 515
GQVIT+GNERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYA
Sbjct: 202 GQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYA 252
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 344 bits (846), Expect = 2e-95
Identities = 162/171 (94%), Positives = 169/171 (98%)
Frame = +3
Query: 3 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 182
ETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRD
Sbjct: 112 ETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRD 171
Query: 183 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPD 362
LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPD
Sbjct: 172 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPD 231
Query: 363 GQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYA 515
GQVIT+GNERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYA
Sbjct: 232 GQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYA 282
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 344 bits (846), Expect = 2e-95
Identities = 162/171 (94%), Positives = 169/171 (98%)
Frame = +3
Query: 3 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 182
ETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRD
Sbjct: 126 ETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRD 185
Query: 183 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPD 362
LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPD
Sbjct: 186 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPD 245
Query: 363 GQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYA 515
GQVIT+GNERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYA
Sbjct: 246 GQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYA 296
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 343 bits (844), Expect = 3e-95
Identities = 161/171 (94%), Positives = 169/171 (98%)
Frame = +3
Query: 3 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 182
ETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRD
Sbjct: 126 ETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRD 185
Query: 183 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPD 362
LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPD
Sbjct: 186 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPD 245
Query: 363 GQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYA 515
GQVIT+GNERFRCPEA+FQPSFLGMES GIHET YNSIMKCD+DIRKDLYA
Sbjct: 246 GQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYA 296
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 343 bits (844), Expect = 3e-95
Identities = 161/171 (94%), Positives = 169/171 (98%)
Frame = +3
Query: 3 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 182
ETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRD
Sbjct: 126 ETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRD 185
Query: 183 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPD 362
LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPD
Sbjct: 186 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPD 245
Query: 363 GQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYA 515
GQVIT+GNERFRCPEA+FQPSFLGMES GIHET YNSIMKCD+DIRKDLYA
Sbjct: 246 GQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYA 296
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 343 bits (844), Expect = 3e-95
Identities = 161/171 (94%), Positives = 169/171 (98%)
Frame = +3
Query: 3 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 182
ETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRD
Sbjct: 126 ETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRD 185
Query: 183 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPD 362
LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPD
Sbjct: 186 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPD 245
Query: 363 GQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYA 515
GQVIT+GNERFRCPEA+FQPSFLGMES GIHET YNSIMKCD+DIRKDLYA
Sbjct: 246 GQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYA 296
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 343 bits (844), Expect = 3e-95
Identities = 161/171 (94%), Positives = 169/171 (98%)
Frame = +3
Query: 3 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 182
ETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRD
Sbjct: 126 ETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRD 185
Query: 183 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPD 362
LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPD
Sbjct: 186 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPD 245
Query: 363 GQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYA 515
GQVIT+GNERFRCPEA+FQPSFLGMES GIHET YNSIMKCD+DIRKDLYA
Sbjct: 246 GQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYA 296
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 322 bits (792), Expect = 7e-89
Identities = 151/171 (88%), Positives = 161/171 (94%)
Frame = +3
Query: 3 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 182
ETFN+PAMYV IQAVLSLYASGRTTGIVLD+GDGV+HTVPIYEGYALPHAI RLDLAGRD
Sbjct: 125 ETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVPIYEGYALPHAIQRLDLAGRD 184
Query: 183 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPD 362
LTDY+MKILTERGY+FTTTAEREIVRDIKEKLCYVA DFE E+A AA+S+SLEKSYELPD
Sbjct: 185 LTDYMMKILTERGYTFTTTAEREIVRDIKEKLCYVAHDFESELAAAASSSSLEKSYELPD 244
Query: 363 GQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYA 515
GQVITIGNERFRCPE LFQP+F+GME GIHET Y SIMKCDVDIRKDLYA
Sbjct: 245 GQVITIGNERFRCPEVLFQPAFIGMEGAGIHETTYQSIMKCDVDIRKDLYA 295
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 198 bits (482), Expect = 3e-51
Identities = 89/170 (52%), Positives = 119/170 (70%)
Frame = +3
Query: 3 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 182
E + ++YVA+QAVL+LYA G TG+V+DSGDGV+H P+YEG+AL H RLD+AGRD
Sbjct: 129 EQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLDIAGRD 188
Query: 183 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPD 362
+T YL+K+L +RGY+F +A+ E VR +KEKLCY+A D EQE A +T L + Y LPD
Sbjct: 189 ITKYLIKLLLQRGYNFNHSADFETVRQMKEKLCYIAYDVEQEERLALETTVLSQQYTLPD 248
Query: 363 GQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLY 512
G+VI +G ERF PE LFQP + +E G+ E ++ I D+D R D Y
Sbjct: 249 GRVIRLGGERFEAPEILFQPHLINVEKAGLSELLFGCIQASDIDTRLDFY 298
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 196 bits (478), Expect = 8e-51
Identities = 95/171 (55%), Positives = 121/171 (70%)
Frame = +3
Query: 3 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 182
ETFN PA+Y+ +QAVLSLYA+GRTTG+VLDSGDGV+H VPI +G+A+ HAI R+DLAGRD
Sbjct: 129 ETFNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIVKGFAMKHAIQRMDLAGRD 188
Query: 183 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPD 362
+T+YL +L GY F + E EIVR++KE CY+ALD T + S++ SY LPD
Sbjct: 189 VTEYLRVLLRREGYEFHRSNEFEIVREMKENACYLALD-----PTKVENNSVKSSYALPD 243
Query: 363 GQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYA 515
I I N FR PE LF+P +G E G+ V SIMKCDVD+R+ LY+
Sbjct: 244 TTKIEISNSLFRAPEVLFKPDLIGTEWPGMAHVVNQSIMKCDVDLRQTLYS 294
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 116 bits (279), Expect = 1e-26
Identities = 68/187 (36%), Positives = 101/187 (54%), Gaps = 17/187 (9%)
Frame = +3
Query: 3 ETFNSPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAIL 158
E+FN P +Y+A+QAVL+L AS + TG+V+DSGDGV+H +P+ +GY + I
Sbjct: 139 ESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHCIPVADGYVIGSCIK 198
Query: 159 RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSL 338
+ +AGRD+T ++ +L +R ++ E+ + IKEK CYV D +E T
Sbjct: 199 HIPIAGRDITYFIQSLLRDREHTIPAEQSYEVAKMIKEKFCYVCPDVMKEF--VKYDTDA 256
Query: 339 EKSYELPDG-QVIT-------IGNERFRCPEALFQPSFLGME-SCGIHETVYNSIMKCDV 491
K DG IT +G ERF PE F P F E + I +T+ I +C +
Sbjct: 257 AKWLRTYDGINSITKKPFNVDVGYERFLGPEIFFHPEFCNPEFTTPISDTIDTLIQQCPI 316
Query: 492 DIRKDLY 512
D+R+ LY
Sbjct: 317 DVRRGLY 323
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 90.2 bits (214), Expect = 8e-19
Identities = 54/164 (32%), Positives = 88/164 (53%), Gaps = 6/164 (3%)
Frame = +3
Query: 39 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 218
Q L LYA TTG+V+D G+ V+ VP+ +GY + AI + + + D L L+
Sbjct: 310 QPSLILYAYDVTTGVVVDIGERVN-IVPVIDGYVVESAICSIPYGSQQMGDSLRASLSAH 368
Query: 219 G---YSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAAST--SLEKSYELPDGQV-ITI 380
Y+F + E+ I+R E+ YV D+++E + T SL+ P Q I
Sbjct: 369 NKGLYAFQSPVEKLILRFALEQTTYVPEDYQKEEKSENKETRISLDAFTPSPGMQTRFDI 428
Query: 381 GNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLY 512
N RF C E LF+P G+++ G+H+ ++ +I++C +D R+ LY
Sbjct: 429 DNSRFLCTEGLFKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLY 472
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 65.7 bits (153), Expect = 2e-11
Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 22/165 (13%)
Frame = +3
Query: 81 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 260
+V+DSG + G + +++R+D+ G+ LT+ L ++ R + E ++
Sbjct: 146 VVVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKALTNKLKDWVSYR--QLNVSEETYVIN 203
Query: 261 DIKEKLCYVALDFEQEMATAA---ASTSLEKSYELPD------GQV-------------I 374
+ KE LC+V+ +F++ M A + K Y +PD G V I
Sbjct: 204 ECKEDLCFVSQNFDESMKEARNRFQENTTMKRYIMPDFHSTFRGVVKDVKEPHDPQIPSI 263
Query: 375 TIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDL 509
+G ERF PE LF PS + ++ CG+ E V SI +C +R L
Sbjct: 264 HLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPAL 308
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 65.7 bits (153), Expect = 2e-11
Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 22/165 (13%)
Frame = +3
Query: 81 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 260
+V+DSG + G + +++R+D+ G+ LT+ L ++ R + E ++
Sbjct: 146 VVVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKALTNKLKDWVSYR--QLNVSEETYVIN 203
Query: 261 DIKEKLCYVALDFEQEMATAA---ASTSLEKSYELPD------GQV-------------I 374
+ KE LC+V+ +F++ M A + K Y +PD G V I
Sbjct: 204 ECKEDLCFVSQNFDESMKEARNRFQGNTTMKRYIMPDFHSTFRGVVKDVKEPHDPQIPSI 263
Query: 375 TIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDL 509
+G ERF PE LF PS + ++ CG+ E V SI +C +R L
Sbjct: 264 HLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPAL 308
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 64.1 bits (149), Expect = 6e-11
Identities = 27/72 (37%), Positives = 48/72 (66%)
Frame = +3
Query: 3 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 182
E F PA Y++ VLS +A GRT G+++DSG + VP+++GYA+ HA+++ + G
Sbjct: 148 EKFQVPAYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPVFDGYAVTHAVVKCPIGGDL 207
Query: 183 LTDYLMKILTER 218
+T+ L ++L ++
Sbjct: 208 ITEQLAQMLDQQ 219
Score = 29.5 bits (63), Expect = 1.5
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Frame = +3
Query: 348 YELPDGQVITIGNERFRCPEALFQPSFLGMES-----CGIHETVYNSIMKCDVDIRKDLY 512
Y P+G G ER + PE LF +L E + + S D+DIR L+
Sbjct: 293 YAFPNGYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLF 352
Query: 513 A 515
+
Sbjct: 353 S 353
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 31.9 bits (69), Expect = 0.28
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3
Query: 106 TPSPESSTIPVVRPEAYSESTAWMATYMAGEL 11
TP P SST+PVV P ++ T +Y+A L
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYLANTL 896
>AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical
protein W02F12.4a protein.
Length = 378
Score = 31.5 bits (68), Expect = 0.37
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -2
Query: 251 FPLSGGGERVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGY 117
F L+GG + DL + G++ ++V E G+ Q + F+D Y
Sbjct: 187 FRLAGGKVAHNAIKYDLRVIYGELQRNEVLEEFGIPQDIYFIDSY 231
>U80448-9|AAB37822.2| 577|Caenorhabditis elegans Hypothetical
protein F59A3.8 protein.
Length = 577
Score = 29.1 bits (62), Expect = 2.0
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +2
Query: 113 HRTHLRRLRSAPRHPPSGLGWSRLDRLPHEDPHREGLLVHHHR*EGNRS*HQGEALLCRP 292
++ +L++ S PR PP G + ++P+ DP G V+ + + + H E+L P
Sbjct: 72 NKPNLKKSPSNPRIPPGGSHPRKKPKVPNRDP--SGKHVNSDKKKPSAEAHDKESLSSPP 129
Query: 293 RLRAG 307
+ AG
Sbjct: 130 QTDAG 134
>AY349016-1|AAQ55496.1| 394|Caenorhabditis elegans NHR-41 protein.
Length = 394
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -2
Query: 215 LGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYG 114
+GED V+G V S T GVG S + D G
Sbjct: 75 IGEDEMTVIGLVPPSASPTSSGVGSSSSISDDSG 108
>AY349015-1|AAQ55495.1| 459|Caenorhabditis elegans NHR-41B protein.
Length = 459
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -2
Query: 215 LGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYG 114
+GED V+G V S T GVG S + D G
Sbjct: 172 IGEDEMTVIGLVPPSASPTSSGVGSSSSISDDSG 205
>AY349014-1|AAQ55494.1| 583|Caenorhabditis elegans NHR-41A protein.
Length = 583
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -2
Query: 215 LGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYG 114
+GED V+G V S T GVG S + D G
Sbjct: 296 IGEDEMTVIGLVPPSASPTSSGVGSSSSISDDSG 329
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,234,616
Number of Sequences: 27780
Number of extensions: 201520
Number of successful extensions: 707
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 702
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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