Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32347
         (474 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U82010-1|AAC51330.1|  443|Homo sapiens heme A: farnesyltransfera...    50   4e-06
U09466-1|AAA21148.1|  443|Homo sapiens heme A:farnesyltransferas...    50   4e-06
BT006985-1|AAP35631.1|  443|Homo sapiens COX10 homolog, cytochro...    50   4e-06
BC006394-1|AAH06394.1|  443|Homo sapiens COX10 homolog, cytochro...    50   4e-06
BC000060-1|AAH00060.1|  443|Homo sapiens COX10 homolog, cytochro...    50   4e-06
AF007191-1|AAC02269.1|  589|Homo sapiens intestinal mucin protein.     29   8.2  

>U82010-1|AAC51330.1|  443|Homo sapiens heme A: farnesyltransferase
           protein.
          Length = 443

 Score = 50.0 bits (114), Expect = 4e-06
 Identities = 31/70 (44%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
 Frame = +2

Query: 266 KVTQDTRVWKETPS--YDRKSNTGQYCLMLSKSRLTSLVVLTSMAGYALXPAPFXLTTFA 439
           K T++ + WKE     YD      Q    LSK +LT+LVV T+ AG+AL P PF    F 
Sbjct: 135 KETKEEKRWKEMKLQVYDLPGILAQ----LSKIKLTALVVSTTAAGFALAPGPFDWPCFL 190

Query: 440 FCAVGTGLVS 469
             +VGTGL S
Sbjct: 191 LTSVGTGLAS 200


>U09466-1|AAA21148.1|  443|Homo sapiens heme A:farnesyltransferase
           protein.
          Length = 443

 Score = 50.0 bits (114), Expect = 4e-06
 Identities = 31/70 (44%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
 Frame = +2

Query: 266 KVTQDTRVWKETPS--YDRKSNTGQYCLMLSKSRLTSLVVLTSMAGYALXPAPFXLTTFA 439
           K T++ + WKE     YD      Q    LSK +LT+LVV T+ AG+AL P PF    F 
Sbjct: 135 KETKEEKRWKEMKLQVYDLPGILAQ----LSKIKLTALVVSTTAAGFALAPGPFDWPCFL 190

Query: 440 FCAVGTGLVS 469
             +VGTGL S
Sbjct: 191 LTSVGTGLAS 200


>BT006985-1|AAP35631.1|  443|Homo sapiens COX10 homolog, cytochrome
           c oxidase assembly protein, heme A: farnesyltransfera
           protein.
          Length = 443

 Score = 50.0 bits (114), Expect = 4e-06
 Identities = 31/70 (44%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
 Frame = +2

Query: 266 KVTQDTRVWKETPS--YDRKSNTGQYCLMLSKSRLTSLVVLTSMAGYALXPAPFXLTTFA 439
           K T++ + WKE     YD      Q    LSK +LT+LVV T+ AG+AL P PF    F 
Sbjct: 135 KETKEEKRWKEMKLQVYDLPGILAQ----LSKIKLTALVVSTTAAGFALAPGPFDWPCFL 190

Query: 440 FCAVGTGLVS 469
             +VGTGL S
Sbjct: 191 LTSVGTGLAS 200


>BC006394-1|AAH06394.1|  443|Homo sapiens COX10 homolog, cytochrome
           c oxidase assembly protein, heme A: farnesyltransfera
           protein.
          Length = 443

 Score = 50.0 bits (114), Expect = 4e-06
 Identities = 31/70 (44%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
 Frame = +2

Query: 266 KVTQDTRVWKETPS--YDRKSNTGQYCLMLSKSRLTSLVVLTSMAGYALXPAPFXLTTFA 439
           K T++ + WKE     YD      Q    LSK +LT+LVV T+ AG+AL P PF    F 
Sbjct: 135 KETKEEKRWKEMKLQVYDLPGILAQ----LSKIKLTALVVSTTAAGFALAPGPFDWPCFL 190

Query: 440 FCAVGTGLVS 469
             +VGTGL S
Sbjct: 191 LTSVGTGLAS 200


>BC000060-1|AAH00060.1|  443|Homo sapiens COX10 homolog, cytochrome
           c oxidase assembly protein, heme A: farnesyltransfera
           protein.
          Length = 443

 Score = 50.0 bits (114), Expect = 4e-06
 Identities = 31/70 (44%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
 Frame = +2

Query: 266 KVTQDTRVWKETPS--YDRKSNTGQYCLMLSKSRLTSLVVLTSMAGYALXPAPFXLTTFA 439
           K T++ + WKE     YD      Q    LSK +LT+LVV T+ AG+AL P PF    F 
Sbjct: 135 KETKEEKRWKEMKLQVYDLPGILAQ----LSKIKLTALVVSTTAAGFALAPGPFDWPCFL 190

Query: 440 FCAVGTGLVS 469
             +VGTGL S
Sbjct: 191 LTSVGTGLAS 200


>AF007191-1|AAC02269.1|  589|Homo sapiens intestinal mucin protein.
          Length = 589

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 9/70 (12%)
 Frame = +2

Query: 230 PLKT--QTTATVKNKVTQDTRVWKETPSYDRKSNTGQYCL---MLSKSRLTSLV----VL 382
           PL T   TT TVK  VT  T  ++ET +    ++     L   M S +RLTS +     L
Sbjct: 331 PLSTIVATTGTVKTTVTSSTATFRETTTLTSTTDISTESLMTAMTSTTRLTSAITSKTTL 390

Query: 383 TSMAGYALXP 412
           TS+   A  P
Sbjct: 391 TSLKTTASRP 400


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,653,392
Number of Sequences: 237096
Number of extensions: 1385879
Number of successful extensions: 5880
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5880
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4156838854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)