Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32347
         (474 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058639-1|AAL13868.1|  391|Drosophila melanogaster LD33876p pro...    66   2e-11
AE014134-1840|AAF52915.1|  391|Drosophila melanogaster CG5037-PA...    66   2e-11
BT023904-1|ABA81838.1|  563|Drosophila melanogaster IP14421p pro...    30   1.4  
AY113532-1|AAM29537.1|  518|Drosophila melanogaster RE60854p pro...    30   1.4  
AE014296-574|AAN11534.1|  512|Drosophila melanogaster CG15812-PB...    30   1.4  
AE014296-573|AAF47724.2|  518|Drosophila melanogaster CG15812-PA...    30   1.4  
AY071291-1|AAL48913.1|  535|Drosophila melanogaster RE31829p pro...    28   5.6  

>AY058639-1|AAL13868.1|  391|Drosophila melanogaster LD33876p
           protein.
          Length = 391

 Score = 66.1 bits (154), Expect = 2e-11
 Identities = 45/100 (45%), Positives = 55/100 (55%), Gaps = 5/100 (5%)
 Frame = +2

Query: 188 LARISTAQNWRSKVPLKTQTTATVKN--KVTQ--DTRV-WKETPSYDRKSNTGQYCLMLS 352
           L R STA    S+      T + V    KV    D+++ W  +P Y     T      LS
Sbjct: 22  LIRYSTAATIASQDDKGVTTASPVSQAGKVQHLPDSQITWMPSP-YTMPGKTLSQYKKLS 80

Query: 353 KSRLTSLVVLTSMAGYALXPAPFXLTTFAFCAVGTGLVSA 472
           K RLTSLVV+T+M GYA+ PA F  TTFA C +GTGLVSA
Sbjct: 81  KFRLTSLVVITTMGGYAMAPAAFDPTTFAMCTLGTGLVSA 120


>AE014134-1840|AAF52915.1|  391|Drosophila melanogaster CG5037-PA
           protein.
          Length = 391

 Score = 66.1 bits (154), Expect = 2e-11
 Identities = 45/100 (45%), Positives = 55/100 (55%), Gaps = 5/100 (5%)
 Frame = +2

Query: 188 LARISTAQNWRSKVPLKTQTTATVKN--KVTQ--DTRV-WKETPSYDRKSNTGQYCLMLS 352
           L R STA    S+      T + V    KV    D+++ W  +P Y     T      LS
Sbjct: 22  LIRYSTAATIASQDDKGVTTASPVSQAGKVQHLPDSQITWMPSP-YTMPGKTLSQYKKLS 80

Query: 353 KSRLTSLVVLTSMAGYALXPAPFXLTTFAFCAVGTGLVSA 472
           K RLTSLVV+T+M GYA+ PA F  TTFA C +GTGLVSA
Sbjct: 81  KFRLTSLVVITTMGGYAMAPAAFDPTTFAMCTLGTGLVSA 120


>BT023904-1|ABA81838.1|  563|Drosophila melanogaster IP14421p
           protein.
          Length = 563

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 14/29 (48%), Positives = 21/29 (72%)
 Frame = +2

Query: 152 LFKITNNTLFQHLARISTAQNWRSKVPLK 238
           LF+I  +TL++HL R +T+QN + K  LK
Sbjct: 526 LFEIPKSTLWRHLQRPTTSQNKKVKKELK 554


>AY113532-1|AAM29537.1|  518|Drosophila melanogaster RE60854p
           protein.
          Length = 518

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 14/29 (48%), Positives = 21/29 (72%)
 Frame = +2

Query: 152 LFKITNNTLFQHLARISTAQNWRSKVPLK 238
           LF+I  +TL++HL R +T+QN + K  LK
Sbjct: 481 LFEIPKSTLWRHLQRRTTSQNKKVKKELK 509


>AE014296-574|AAN11534.1|  512|Drosophila melanogaster CG15812-PB,
           isoform B protein.
          Length = 512

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 14/29 (48%), Positives = 21/29 (72%)
 Frame = +2

Query: 152 LFKITNNTLFQHLARISTAQNWRSKVPLK 238
           LF+I  +TL++HL R +T+QN + K  LK
Sbjct: 475 LFEIPKSTLWRHLQRRTTSQNKKVKKELK 503


>AE014296-573|AAF47724.2|  518|Drosophila melanogaster CG15812-PA,
           isoform A protein.
          Length = 518

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 14/29 (48%), Positives = 21/29 (72%)
 Frame = +2

Query: 152 LFKITNNTLFQHLARISTAQNWRSKVPLK 238
           LF+I  +TL++HL R +T+QN + K  LK
Sbjct: 481 LFEIPKSTLWRHLQRRTTSQNKKVKKELK 509


>AY071291-1|AAL48913.1|  535|Drosophila melanogaster RE31829p
           protein.
          Length = 535

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 20/69 (28%), Positives = 26/69 (37%), Gaps = 3/69 (4%)
 Frame = +2

Query: 209 QNWRSKVPLKTQTTATVKNKVTQDTRVWKETPSYDRKSNTGQYCLMLSKS---RLTSLVV 379
           +NW       T     V  K   + R W       RK    Q CL+   +   + T+L V
Sbjct: 87  ENWMESFEPATSDDLAVHPKKVGELRDWLRHCEAVRKKFPAQMCLLTGPTGAGKTTTLRV 146

Query: 380 LTSMAGYAL 406
           LT   GY L
Sbjct: 147 LTKEFGYQL 155


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,964,586
Number of Sequences: 53049
Number of extensions: 417536
Number of successful extensions: 912
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 911
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1622204766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)