Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32345
(357 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 228 1e-60
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 226 3e-60
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 226 3e-60
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 226 3e-60
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 226 3e-60
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 226 3e-60
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 226 3e-60
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 226 3e-60
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 217 2e-57
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 187 2e-48
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 186 3e-48
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 185 9e-48
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 185 9e-48
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 181 2e-46
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 133 4e-32
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 120 3e-28
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 88 2e-18
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 75 1e-14
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 46 6e-06
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 46 6e-06
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 46 1e-05
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 31 0.18
AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical ... 30 0.55
AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 29 0.72
AF125960-3|AAD14737.1| 446|Caenorhabditis elegans Hypothetical ... 29 1.3
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 2.2
AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical ... 28 2.2
U80836-8|AAL32206.2| 212|Caenorhabditis elegans Hypothetical pr... 26 6.7
AF043699-3|AAB97566.1| 1220|Caenorhabditis elegans Temporarily a... 26 6.7
Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical pr... 26 8.9
Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical p... 26 8.9
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 26 8.9
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 228 bits (557), Expect = 1e-60
Identities = 101/105 (96%), Positives = 103/105 (98%)
Frame = +2
Query: 41 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 220
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 221 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNXLRVVPEEHPVL 355
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYN LRV PEEHPVL
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVL 105
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 226 bits (553), Expect = 3e-60
Identities = 100/105 (95%), Positives = 103/105 (98%)
Frame = +2
Query: 41 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 220
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 221 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNXLRVVPEEHPVL 355
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYN LRV PEEHPVL
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVL 105
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 226 bits (553), Expect = 3e-60
Identities = 100/105 (95%), Positives = 103/105 (98%)
Frame = +2
Query: 41 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 220
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 221 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNXLRVVPEEHPVL 355
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYN LRV PEEHPVL
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVL 105
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 226 bits (553), Expect = 3e-60
Identities = 100/105 (95%), Positives = 103/105 (98%)
Frame = +2
Query: 41 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 220
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 221 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNXLRVVPEEHPVL 355
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYN LRV PEEHPVL
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVL 105
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 226 bits (553), Expect = 3e-60
Identities = 100/105 (95%), Positives = 103/105 (98%)
Frame = +2
Query: 41 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 220
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 221 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNXLRVVPEEHPVL 355
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYN LRV PEEHPVL
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVL 105
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 226 bits (553), Expect = 3e-60
Identities = 99/105 (94%), Positives = 103/105 (98%)
Frame = +2
Query: 41 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 220
MCDDDVAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 221 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNXLRVVPEEHPVL 355
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYN LRV PEEHPVL
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVL 105
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 226 bits (553), Expect = 3e-60
Identities = 100/105 (95%), Positives = 103/105 (98%)
Frame = +2
Query: 41 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 220
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 221 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNXLRVVPEEHPVL 355
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYN LRV PEEHPVL
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVL 105
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 226 bits (553), Expect = 3e-60
Identities = 100/105 (95%), Positives = 103/105 (98%)
Frame = +2
Query: 41 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 220
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 221 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNXLRVVPEEHPVL 355
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYN LRV PEEHPVL
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVL 105
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 217 bits (529), Expect = 2e-57
Identities = 94/103 (91%), Positives = 101/103 (98%)
Frame = +2
Query: 47 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARSK 226
++++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+SK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 227 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNXLRVVPEEHPVL 355
RGILTLKYPIEHGI+TNWDDMEKIWHHTFYN LR+ PEEHPVL
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVL 104
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 187 bits (456), Expect = 2e-48
Identities = 82/87 (94%), Positives = 85/87 (97%)
Frame = +2
Query: 95 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARSKRGILTLKYPIEHGIIT 274
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+SKRGILTLKYPIEHGI+T
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 275 NWDDMEKIWHHTFYNXLRVVPEEHPVL 355
NWDDMEKIWHHTFYN LRV PEEHPVL
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVL 91
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 186 bits (454), Expect = 3e-48
Identities = 84/86 (97%), Positives = 86/86 (100%)
Frame = +2
Query: 41 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 220
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 221 SKRGILTLKYPIEHGIITNWDDMEKI 298
SKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 185 bits (450), Expect = 9e-48
Identities = 83/86 (96%), Positives = 86/86 (100%)
Frame = +2
Query: 41 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 220
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 221 SKRGILTLKYPIEHGIITNWDDMEKI 298
SKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 185 bits (450), Expect = 9e-48
Identities = 83/86 (96%), Positives = 86/86 (100%)
Frame = +2
Query: 41 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 220
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 221 SKRGILTLKYPIEHGIITNWDDMEKI 298
SKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 181 bits (440), Expect = 2e-46
Identities = 81/83 (97%), Positives = 83/83 (100%)
Frame = +2
Query: 41 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 220
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 221 SKRGILTLKYPIEHGIITNWDDM 289
SKRGILTLKYPIEHGI+TNWDDM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDM 83
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 133 bits (321), Expect = 4e-32
Identities = 57/61 (93%), Positives = 59/61 (96%)
Frame = +2
Query: 173 MVGMGQKDSYVGDEARSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNXLRVVPEEHPV 352
MVGMGQKDSYVGDEA+SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYN LRV PEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 353 L 355
L
Sbjct: 61 L 61
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 120 bits (289), Expect = 3e-28
Identities = 54/107 (50%), Positives = 75/107 (70%), Gaps = 4/107 (3%)
Frame = +2
Query: 47 DDDVAA---LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 217
D DV A +V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A
Sbjct: 2 DYDVIANQPVVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKA 61
Query: 218 RSKRGILTLKYPIEHGIITNWDDMEKIWHHTF-YNXLRVVPEEHPVL 355
S RG+ +++YP+EHGI+ NW DMEKIW + F + L++ PEEHPVL
Sbjct: 62 ESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVL 108
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 87.8 bits (208), Expect = 2e-18
Identities = 44/100 (44%), Positives = 63/100 (63%), Gaps = 3/100 (3%)
Frame = +2
Query: 65 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM-VGMGQ-KDSYVGDEARSKRGIL 238
+VVDNG+G K G+AG + P +FPS+VGRP + VG + KD VG+E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 239 TLKYPIEHGIITNWDDMEKIWHHTF-YNXLRVVPEEHPVL 355
+ YP+++GI+ NWDDM +W HTF L + P+E +L
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLL 108
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 75.4 bits (177), Expect = 1e-14
Identities = 42/115 (36%), Positives = 58/115 (50%), Gaps = 13/115 (11%)
Frame = +2
Query: 41 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGM 184
M + A V+DNG+G K G+AG+ P+ + PS V Q V G+
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60
Query: 185 GQKDSYVGDEARSKRGI-LTLKYPIEHGIITNWDDMEKIWHHTFYNXLRVVPEEH 346
D ++GDEA S T+KYPI HGI+ +WD ME+ W + LR PE+H
Sbjct: 61 DDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDH 115
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 46.4 bits (105), Expect = 6e-06
Identities = 26/86 (30%), Positives = 43/86 (50%)
Frame = +2
Query: 56 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARSKRGI 235
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 236 LTLKYPIEHGIITNWDDMEKIWHHTF 313
++ PIE G + NWD ++IW TF
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF 82
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 46.4 bits (105), Expect = 6e-06
Identities = 26/86 (30%), Positives = 43/86 (50%)
Frame = +2
Query: 56 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARSKRGI 235
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 236 LTLKYPIEHGIITNWDDMEKIWHHTF 313
++ PIE G + NWD ++IW TF
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF 82
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 45.6 bits (103), Expect = 1e-05
Identities = 36/119 (30%), Positives = 55/119 (46%), Gaps = 17/119 (14%)
Frame = +2
Query: 50 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR--S 223
D+V+ LV D GS + GFAG++ P+ PS + Q+ GD ++ +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQT 68
Query: 224 KR------GILTLKYP---------IEHGIITNWDDMEKIWHHTFYNXLRVVPEEHPVL 355
KR G + P ++ G+I +W+ EKI H++ N L P EHPVL
Sbjct: 69 KREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVL 127
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 31.5 bits (68), Expect = 0.18
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 72 STMAPACARPVSPATTRPAPSSRP 143
+T AP PATTRPAP+S+P
Sbjct: 317 ATRAPPATTRAPPATTRPAPASQP 340
>AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical
protein T08D2.8 protein.
Length = 388
Score = 29.9 bits (64), Expect = 0.55
Identities = 18/36 (50%), Positives = 20/36 (55%)
Frame = +3
Query: 63 RL*STMAPACARPVSPATTRPAPSSRPSWVALATRA 170
RL S +AP A P S A TR APS + VA RA
Sbjct: 231 RLSSAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRA 266
>AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical
protein F59E12.1 protein.
Length = 811
Score = 29.5 bits (63), Expect = 0.72
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -1
Query: 186 PIPTITPWWRGRPTMDGKTARGASSPAKPALHMPEPL 76
P T TP RGRP + ++ P P P+PL
Sbjct: 336 PPATQTPRSRGRPRIHSSASKKTEKPETPRAESPDPL 372
>AF125960-3|AAD14737.1| 446|Caenorhabditis elegans Hypothetical
protein T12B3.1 protein.
Length = 446
Score = 28.7 bits (61), Expect = 1.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 266 IITNWDDMEKIWHHTFYNXLRVVPE 340
++ NWD EK W TF+ L+ + E
Sbjct: 382 VLQNWDQTEKDWSPTFWFLLKCIRE 406
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 2.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 95 KAGFAGDDAPRAVFPSIVGRPRHQG 169
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical
protein F54A3.1 protein.
Length = 425
Score = 27.9 bits (59), Expect = 2.2
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +3
Query: 72 STMAPACARPVSPATTRPAPSSRPSWVALATRA 170
S +AP A P S A TR APS + VA RA
Sbjct: 238 SAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRA 270
>U80836-8|AAL32206.2| 212|Caenorhabditis elegans Hypothetical
protein B0432.9 protein.
Length = 212
Score = 26.2 bits (55), Expect = 6.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 259 LDGVLQSEDTSLAPGLVTHVGVFLAHTDHHA 167
L+ V + ++ +AP VTHV V H DH A
Sbjct: 44 LEIVQKLQELHVAPSTVTHVVVTHGHLDHCA 74
>AF043699-3|AAB97566.1| 1220|Caenorhabditis elegans Temporarily
assigned gene nameprotein 203 protein.
Length = 1220
Score = 26.2 bits (55), Expect = 6.7
Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +2
Query: 110 GDDAPRAVFPS--IVGRPRHQGVMVGMGQKDSYVGDEARSKRGILTLKYPIE 259
G R + P +VG PR + +M+G ++ V R LT+ P+E
Sbjct: 109 GKTGCRRIVPGHFLVGDPRGRALMIGAVERQKLVYIMNRDSEAHLTISSPLE 160
>Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 25.8 bits (54), Expect = 8.9
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +2
Query: 149 GRPRHQGVMVGMGQKDSYVGD----EARSKRGILTLKYPIEHGIITNWDDMEKIWHHTF 313
G PRH+ + G+ ++++V + EA + + K HG +WD++ K + TF
Sbjct: 629 GIPRHE-ISHGVSDEEAFVREASIIEAVKLKNLRNKKAGEFHGTTKSWDNITKSEYGTF 686
>Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 25.8 bits (54), Expect = 8.9
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +2
Query: 149 GRPRHQGVMVGMGQKDSYVGD----EARSKRGILTLKYPIEHGIITNWDDMEKIWHHTF 313
G PRH+ + G+ ++++V + EA + + K HG +WD++ K + TF
Sbjct: 629 GIPRHE-ISHGVSDEEAFVREASIIEAVKLKNLRNKKAGEFHGTTKSWDNITKSEYGTF 686
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 25.8 bits (54), Expect = 8.9
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1
Query: 154 PSPPGRDGRYGPE 192
P PPG+DG GP+
Sbjct: 267 PGPPGKDGEAGPD 279
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,673,758
Number of Sequences: 27780
Number of extensions: 183376
Number of successful extensions: 811
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 806
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 482051610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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