Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32344
         (516 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0593 + 22596372-22596384,22596856-22597037,22597119-225973...    29   2.2  
07_03_0681 + 20659789-20659839,20660030-20660170,20661294-206613...    28   5.1  
01_06_0639 + 30772804-30772904,30773386-30775675                       28   5.1  
12_01_1048 + 10770461-10770612,10770721-10770730,10771457-107716...    27   6.8  
04_04_1693 + 35404336-35404515,35405732-35406019,35406189-354062...    27   6.8  

>06_03_0593 +
           22596372-22596384,22596856-22597037,22597119-22597344,
           22597429-22597855,22598075-22598429,22598511-22599089
          Length = 593

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = -2

Query: 113 DDSVGIRADWGSDSYGDEESDN 48
           DD V + +DW SDS  DEESD+
Sbjct: 239 DDHVPLESDWNSDS-DDEESDD 259


>07_03_0681 +
           20659789-20659839,20660030-20660170,20661294-20661399,
           20661625-20661806,20661888-20662113,20662198-20662624,
           20662844-20663189,20663271-20663849
          Length = 685

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -2

Query: 113 DDSVGIRADWGSDSYGDEESDNEE 42
           DD V + +DW SDS  +E  D +E
Sbjct: 334 DDHVPLESDWNSDSDDEEPDDLDE 357


>01_06_0639 + 30772804-30772904,30773386-30775675
          Length = 796

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 19/63 (30%), Positives = 30/63 (47%)
 Frame = +1

Query: 97  MPTLSSSVQDNDNIGVEGYNTGYETSNGIKAQETGQLKNIGTENEALEVRGEFAYIGPDG 276
           +P    S +  +N GV GY TG+   +G     +G   N     +A + R ++ Y GP G
Sbjct: 214 LPNSQYSRRQGNNSGVSGYGTGHH-YHGSDTYRSGY--NTQNNQQAYDSR-QYGY-GPSG 268

Query: 277 VTY 285
            +Y
Sbjct: 269 QSY 271


>12_01_1048 +
           10770461-10770612,10770721-10770730,10771457-10771624,
           10771668-10772017,10772107-10772508,10772940-10773318,
           10773801-10774046
          Length = 568

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -1

Query: 342 GNVRCRRLESTLVSDVGHSVSNTVRADVRKFSAN 241
           G   CRR +S  ++  GHS++ T    V  F +N
Sbjct: 174 GEACCRREKSQAIAGPGHSIAVTTSGAVYTFGSN 207


>04_04_1693 +
           35404336-35404515,35405732-35406019,35406189-35406278,
           35406487-35406564,35406638-35406718,35407300-35407350,
           35407788-35407933,35408169-35408235,35408328-35408387,
           35408472-35408501,35408776-35408835,35408936-35409052,
           35409790-35409903,35410068-35410166,35410572-35410697,
           35410774-35410848,35410958-35411029,35411167-35411277,
           35411760-35411843,35413149-35413256,35414207-35414308,
           35414393-35414455,35414524-35414598,35414901-35414972,
           35415063-35415187,35415251-35415302,35415380-35415448,
           35415525-35415540,35415941-35415989,35416607-35417180
          Length = 1077

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = -2

Query: 161 PVLYPSTPMLSLSCTDDDSVGIRADWGSDSYGDEESDNEERFH 33
           P L P T + ++S +DDD     A+   +S+ D + D + RFH
Sbjct: 323 PRLIP-TLLSNMSYSDDDESLADAEVEDESFPDRDQDLKPRFH 364


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,070,516
Number of Sequences: 37544
Number of extensions: 213651
Number of successful extensions: 606
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 605
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)