Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32338
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 62 3e-10
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 62 3e-10
U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 61 5e-10
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 56 2e-08
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 48 4e-06
Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical pr... 40 0.001
DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin p... 40 0.001
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 39 0.002
U40942-4|AAC47069.2| 486|Caenorhabditis elegans Hypothetical pr... 36 0.023
L16679-1|AAA28092.5| 2104|Caenorhabditis elegans Muscle position... 29 1.5
AF289202-1|AAK69172.1| 2104|Caenorhabditis elegans transmembrane... 29 1.5
Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical pr... 29 2.6
AL132895-2|CAC14404.1| 613|Caenorhabditis elegans Hypothetical ... 29 2.6
U21321-11|AAG00044.1| 460|Caenorhabditis elegans Hypothetical p... 28 3.4
U40421-1|AAA81437.2| 178|Caenorhabditis elegans Helix loop heli... 27 6.0
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 27 6.0
AF037063-1|AAC26105.1| 178|Caenorhabditis elegans twist protein. 27 6.0
AF000262-7|AAN60523.1| 544|Caenorhabditis elegans Hypothetical ... 27 6.0
Z70686-3|CAA94611.1| 364|Caenorhabditis elegans Hypothetical pr... 27 8.0
AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein. 27 8.0
AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor o... 27 8.0
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 61.7 bits (143), Expect = 3e-10
Identities = 38/114 (33%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
Frame = +2
Query: 170 SGSCD-RYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPCLERSSLQPPQPTEL 346
+G C ++ C G A CP L +NP + C +P +V E + L PQPT
Sbjct: 257 NGVCSTNFLTCSGGIARIMDCPASLVFNPTI----LVCDWPRDVA--ECAGLPTPQPT-- 308
Query: 347 CPHQFGYFKLGDARNCSGFRNCVNGVGYDFVCPDXLAFNSETYRCEWPDEVADC 508
C GYF G S F C NG CP L F+ T RC++ V++C
Sbjct: 309 CEED-GYFSFGQCS--SSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSEC 359
Score = 30.7 bits (66), Expect = 0.65
Identities = 14/50 (28%), Positives = 20/50 (40%)
Frame = +2
Query: 362 GYFKLGDARNCSGFRNCVNGVGYDFVCPDXLAFNSETYRCEWPDEVADCD 511
G + LG+ F C G+ CP L +N C+W V C+
Sbjct: 30 GLYALGECE--PQFLTCSGGIARIMDCPADLIYNEPLLICDWRHNVIGCE 77
Score = 30.7 bits (66), Expect = 0.65
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +2
Query: 407 NCVNGVGYDFVCPDXLAFNSETYRCEWPDEVADC 508
+C NG F CP L FN ++ C++P C
Sbjct: 421 SCQNGHVDIFECPSSLVFNDQSLICDYPQTSLKC 454
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 61.7 bits (143), Expect = 3e-10
Identities = 38/114 (33%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
Frame = +2
Query: 170 SGSCD-RYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPCLERSSLQPPQPTEL 346
+G C ++ C G A CP L +NP + C +P +V E + L PQPT
Sbjct: 257 NGVCSTNFLTCSGGIARIMDCPASLVFNPTI----LVCDWPRDVA--ECAGLPTPQPT-- 308
Query: 347 CPHQFGYFKLGDARNCSGFRNCVNGVGYDFVCPDXLAFNSETYRCEWPDEVADC 508
C GYF G S F C NG CP L F+ T RC++ V++C
Sbjct: 309 CEED-GYFSFGQCS--SSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSEC 359
Score = 30.7 bits (66), Expect = 0.65
Identities = 14/50 (28%), Positives = 20/50 (40%)
Frame = +2
Query: 362 GYFKLGDARNCSGFRNCVNGVGYDFVCPDXLAFNSETYRCEWPDEVADCD 511
G + LG+ F C G+ CP L +N C+W V C+
Sbjct: 30 GLYALGECE--PQFLTCSGGIARIMDCPADLIYNEPLLICDWRHNVIGCE 77
Score = 30.7 bits (66), Expect = 0.65
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +2
Query: 407 NCVNGVGYDFVCPDXLAFNSETYRCEWPDEVADC 508
+C NG F CP L FN ++ C++P C
Sbjct: 421 SCQNGHVDIFECPSSLVFNDQSLICDYPQTSLKC 454
>U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical
protein R02F2.4 protein.
Length = 431
Score = 60.9 bits (141), Expect = 5e-10
Identities = 36/109 (33%), Positives = 51/109 (46%), Gaps = 1/109 (0%)
Frame = +2
Query: 188 YIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYP-NEVPCLERSSLQPPQPTELCPHQFG 364
+ C G A + CP L +NP ++ C +P N + C E+S + PQ C G
Sbjct: 194 FFSCSEGIAHRRNCPANLVFNPAIS----SCDWPKNVMDCSEKS--EKPQN---CGEVDG 244
Query: 365 YFKLGDARNCSGFRNCVNGVGYDFVCPDXLAFNSETYRCEWPDEVADCD 511
YF G R S F C NG+ CPD L F+ + C++ V +CD
Sbjct: 245 YFSFG--RCSSSFSACTNGIPIVMFCPDGLMFSEKNQMCDYEWNVDECD 291
Score = 39.9 bits (89), Expect = 0.001
Identities = 37/137 (27%), Positives = 52/137 (37%), Gaps = 3/137 (2%)
Frame = +2
Query: 107 GTSTSQAYWDNAGE-LNERXPVSGSCDR-YIECINGTAEEKLCPDGLRYNPNVNFDVYPC 280
G S+ +N E L + SG+C YI C +G+ C L Y+P C
Sbjct: 107 GESSGDELLENVCESLKDGVYSSGTCSSSYIICNSGSPRFLSCSTPLIYDPTNK----KC 162
Query: 281 QYPNEVP-CLERSSLQPPQPTELCPHQFGYFKLGDARNCSGFRNCVNGVGYDFVCPDXLA 457
+ + C + S E C G + N F +C G+ + CP L
Sbjct: 163 SWKGMIDECSQVSG-------EYCESD-GNISKSECSNV--FFSCSEGIAHRRNCPANLV 212
Query: 458 FNSETYRCEWPDEVADC 508
FN C+WP V DC
Sbjct: 213 FNPAISSCDWPKNVMDC 229
Score = 36.3 bits (80), Expect = 0.013
Identities = 33/128 (25%), Positives = 49/128 (38%), Gaps = 4/128 (3%)
Frame = +2
Query: 137 NAGELNERXPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYP-NEVPC-LE 310
N GE++ + C NG CPDGL ++ C Y N C LE
Sbjct: 238 NCGEVDGYFSFGRCSSSFSACTNGIPIVMFCPDGLMFSEKNQM----CDYEWNVDECDLE 293
Query: 311 RSS-LQPPQPTELCPHQFGYFKLGDARNCSG-FRNCVNGVGYDFVCPDXLAFNSETYRCE 484
S ++ + +E A +C+ +C NG F CP L FN + C+
Sbjct: 294 SSGFMENYKASEALTPCTNMDNGLYALDCTPRVLSCQNGRENIFECPPSLVFNENSLICD 353
Query: 485 WPDEVADC 508
+P+ C
Sbjct: 354 YPETSLKC 361
Score = 31.9 bits (69), Expect = 0.28
Identities = 12/32 (37%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +2
Query: 173 GSCD-RYIECINGTAEEKLCPDGLRYNPNVNF 265
G+C+ R++ C++G A CP+ L Y+ N+ F
Sbjct: 36 GACEPRFLACVSGEARYMDCPEDLVYHKNLEF 67
Score = 29.5 bits (63), Expect = 1.5
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +2
Query: 401 FRNCVNGVGYDFVCPDXLAFNSETYRCEWPDEVADC 508
F CV+G CP+ L ++ C+W V +C
Sbjct: 42 FLACVSGEARYMDCPEDLVYHKNLEFCDWRHNVFEC 77
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 55.6 bits (128), Expect = 2e-08
Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 15/133 (11%)
Frame = +2
Query: 140 AGELNERXPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVY-------------PC 280
+G+ + P S +C ++ C++ + CP GL+Y+ ++ + P
Sbjct: 482 SGKSDGFYPNSNNCGLFVLCLSSKSYSMSCPSGLQYSASLKYCTTSTASGCSVTTTRAPT 541
Query: 281 QYPNEVPCLERSSLQPPQPTEL--CPHQFGYFKLGDARNCSGFRNCVNGVGYDFVCPDXL 454
P + ++ P T C G+F G +C F CVNG+ Y+F CP+ L
Sbjct: 542 TTTKSAPTVTTTTRAPTTTTPAFKCTKD-GFF--GVPSDCLKFIRCVNGISYNFECPNGL 598
Query: 455 AFNSETYRCEWPD 493
+F+++T C+ PD
Sbjct: 599 SFHADTMMCDRPD 611
Score = 31.5 bits (68), Expect = 0.37
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +2
Query: 167 VSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPC 304
V C ++I C+NG + CP+GL ++ D C P+ C
Sbjct: 574 VPSDCLKFIRCVNGISYNFECPNGLSFHA----DTMMCDRPDPSKC 615
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 48.0 bits (109), Expect = 4e-06
Identities = 33/111 (29%), Positives = 40/111 (36%), Gaps = 1/111 (0%)
Frame = +2
Query: 179 CDRYIECINGTA-EEKLCPDGLRYNPNVNFDVYPCQYPNEVPCLERSSLQPPQPTELCPH 355
C ++C G E C L +N C YP +V E Q C
Sbjct: 1196 CSAILQCFGGELFEHPSCQSSLAFNQLTG----KCDYPQKVSGCENHG----QTNGECS- 1246
Query: 356 QFGYFKLGDARNCSGFRNCVNGVGYDFVCPDXLAFNSETYRCEWPDEVADC 508
+ G F + DA NC F CV G CP FN C+WP V C
Sbjct: 1247 EHGSF-IADANNCEVFYRCVWGRKVVMTCPSGTVFNPLLSVCDWPSAVPSC 1296
Score = 39.5 bits (88), Expect = 0.001
Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 7/120 (5%)
Frame = +2
Query: 173 GSCD-RYIECINGTAEEKLCPDGLRYNPN-----VNFDVYPCQYPNEVPCLERSSLQPPQ 334
G C +Y+ C G ++ + C + ++ + V V C P P +++ Q
Sbjct: 1120 GVCSSKYLRCSYGASKLQQCSEDRVFSNDKLECIVRESVSACTVPKN-PSIKKYYTSNDQ 1178
Query: 335 PTELCPHQFGYFKLGDARNCSGFRNCVNGVGYDFV-CPDXLAFNSETYRCEWPDEVADCD 511
+ G ++ + R+CS C G ++ C LAFN T +C++P +V+ C+
Sbjct: 1179 SAFCDGKEDGLYR--NERDCSAILQCFGGELFEHPSCQSSLAFNQLTGKCDYPQKVSGCE 1236
Score = 36.3 bits (80), Expect = 0.013
Identities = 34/113 (30%), Positives = 45/113 (39%), Gaps = 5/113 (4%)
Frame = +2
Query: 176 SCDR-YIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPCLERSSLQ--PPQPTEL 346
+C R Y C+NG + C D + + + P E E + P +
Sbjct: 43 ACSREYSICVNGVRQAATCSDDSVFYED---ECVPVDESPECRVDENTEEDDTPYAEFDC 99
Query: 347 CPHQFGYFKLGDARNCSG-FRNCVNGVGYDFVCPDXLAFNSETYRC-EWPDEV 499
Q G + +G CS F +CV G Y CPD L FN T C E DEV
Sbjct: 100 TSKQDGIYSIG----CSNQFISCVAGGAYMAKCPDSLVFNERTQDCRESCDEV 148
Score = 35.5 bits (78), Expect = 0.023
Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Frame = +2
Query: 251 PNVNFDVYPCQYP-NEVPCLERSSLQPPQPTELCPHQFGYFKLGDARNCSGFRNCVNGVG 427
PN +++ Y QY N+VP S+ P G F LG ++ + C NG
Sbjct: 665 PN-SYESYTTQYSSNDVP----STSAAPIGDRCSLDASGLFSLGCSQK---YIQCSNGAA 716
Query: 428 YDFVCPDXLAFNSETYRCEWPDEVADC 508
C + L FN T C + DEV +C
Sbjct: 717 IVRRCGESLYFNEATQECTYRDEVPEC 743
Score = 33.1 bits (72), Expect = 0.12
Identities = 29/108 (26%), Positives = 46/108 (42%), Gaps = 12/108 (11%)
Frame = +2
Query: 44 VYTQTQYQPFGQTNRFQNQYQGTSTSQAYWD----NAGELNERXPVSGS------CD-RY 190
V TQ+ + T + N Y+ +T + D +A + +R + S C +Y
Sbjct: 649 VTTQSTWNDQPSTTQAPNSYESYTTQYSSNDVPSTSAAPIGDRCSLDASGLFSLGCSQKY 708
Query: 191 IECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVP-CLERSSLQPP 331
I+C NG A + C + L +N C Y +EVP C + S P
Sbjct: 709 IQCSNGAAIVRRCGESLYFNEATQ----ECTYRDEVPECGSQGSTSSP 752
Score = 30.7 bits (66), Expect = 0.65
Identities = 24/100 (24%), Positives = 40/100 (40%), Gaps = 6/100 (6%)
Frame = +2
Query: 20 ILTCFCAFVYTQTQYQP---FGQTNRFQNQYQGTSTSQAYWDNAGELNERXPV---SGSC 181
IL CF ++ Q F Q + Q S + + GE +E + +C
Sbjct: 1199 ILQCFGGELFEHPSCQSSLAFNQLTGKCDYPQKVSGCENHGQTNGECSEHGSFIADANNC 1258
Query: 182 DRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVP 301
+ + C+ G CP G +NP ++ C +P+ VP
Sbjct: 1259 EVFYRCVWGRKVVMTCPSGTVFNPLLSV----CDWPSAVP 1294
Score = 29.5 bits (63), Expect = 1.5
Identities = 34/151 (22%), Positives = 55/151 (36%), Gaps = 9/151 (5%)
Frame = +2
Query: 83 NRFQNQYQGTSTSQAYWDNAGELNERXPVSGSCDR-YIECINGTAEEKLCPDGLRYNPNV 259
+R N + D + R PV G C R Y+EC + EKLC G ++ +
Sbjct: 1012 DRADNDSEDEEEDDVEHDQKCTVGSRTPV-GFCVRTYLECTDAGNVEKLCRIGKLFDSHS 1070
Query: 260 NFDV--YPC---QYPNEVPCLERSSLQPPQPTEL---CPHQFGYFKLGDARNCSGFRNCV 415
N V C + + + ++ P QP + C H G S + C
Sbjct: 1071 NRCVPRIGCGKEAIRDAIKDMIATTPAPAQPKQFEGRCAHVDGEAVFSIGVCSSKYLRCS 1130
Query: 416 NGVGYDFVCPDXLAFNSETYRCEWPDEVADC 508
G C + F+++ C + V+ C
Sbjct: 1131 YGASKLQQCSEDRVFSNDKLECIVRESVSAC 1161
>Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical
protein C07G2.1a protein.
Length = 584
Score = 39.5 bits (88), Expect = 0.001
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2
Query: 401 FRNCVNGVGYDFVCPDXLAFNSETYRCEWPDEVADC 508
++NCVNG F+C + L F+ E RC D++A+C
Sbjct: 541 YKNCVNGQEAIFICENGLFFSPEQARCAPADQIAEC 576
Score = 28.3 bits (60), Expect = 3.4
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +2
Query: 362 GYFKLGDARNCSG-FRNCVNGVGYDFVCPDXLAFNSETYRCEWPDEVADC 508
G++ G+ CS + C NG CP LAF+ C++ V +C
Sbjct: 220 GFYSFGE---CSDHYTACSNGYLIPMQCPARLAFDEARVICDYVMNVPEC 266
>DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin
proteoglycan-1 protein.
Length = 584
Score = 39.5 bits (88), Expect = 0.001
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2
Query: 401 FRNCVNGVGYDFVCPDXLAFNSETYRCEWPDEVADC 508
++NCVNG F+C + L F+ E RC D++A+C
Sbjct: 541 YKNCVNGQEAIFICENGLFFSPEQARCAPADQIAEC 576
Score = 28.3 bits (60), Expect = 3.4
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +2
Query: 362 GYFKLGDARNCSG-FRNCVNGVGYDFVCPDXLAFNSETYRCEWPDEVADC 508
G++ G+ CS + C NG CP LAF+ C++ V +C
Sbjct: 220 GFYSFGE---CSDHYTACSNGYLIPMQCPARLAFDEARVICDYVMNVPEC 266
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 38.7 bits (86), Expect = 0.002
Identities = 25/114 (21%), Positives = 42/114 (36%), Gaps = 1/114 (0%)
Frame = +2
Query: 170 SGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPCLERSSLQPPQPTELC 349
+G Y CI+ + CP+ L+++ V+P P P++ C
Sbjct: 965 AGCSSYYFSCIDEQIRKMSCPNSLKFSKESEKCVFPIDAKECSIATTLDRTPPAVPSDFC 1024
Query: 350 PHQFGYFKLGDARNCSG-FRNCVNGVGYDFVCPDXLAFNSETYRCEWPDEVADC 508
+ L + CS + C NG + C L +N +T C + DC
Sbjct: 1025 TIRSN--GLHHLKMCSPHYIVCDNGRAFSGTCIAPLVYNGDTQTCNYKSTNKDC 1076
Score = 37.5 bits (83), Expect = 0.006
Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 2/109 (1%)
Frame = +2
Query: 188 YIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPCLERSSLQPPQPTELC-PHQFG 364
Y++C+ G + C GL YN C Y + V + + C G
Sbjct: 906 YVQCMQGRSLISSCAPGLFYNEKNGM----CAYKHTVDTCKIGKGSDIIDSNACFGKSDG 961
Query: 365 YFKLGDARNCSGFR-NCVNGVGYDFVCPDXLAFNSETYRCEWPDEVADC 508
Y+ G CS + +C++ CP+ L F+ E+ +C +P + +C
Sbjct: 962 YYSAG----CSSYYFSCIDEQIRKMSCPNSLKFSKESEKCVFPIDAKEC 1006
Score = 34.3 bits (75), Expect = 0.052
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +2
Query: 311 RSSLQPPQPTELCPHQFGYFKLGDARNCSGFRNCVNGVGYDFVCPDXLAFNSETYRCE 484
++ L P P CP G + +G + S + CVN V Y+ CP+ L F+ RCE
Sbjct: 33 KNVLNPKGPP--CPDGDGLYAVGCS---SKYLQCVNNVEYEQSCPEGLYFDRLLARCE 85
Score = 34.3 bits (75), Expect = 0.052
Identities = 21/67 (31%), Positives = 25/67 (37%), Gaps = 5/67 (7%)
Frame = +2
Query: 323 QPPQPTELCPHQFGYFKLGDARNCSG-----FRNCVNGVGYDFVCPDXLAFNSETYRCEW 487
Q P T + F L D + SG F C NG CP L FN C++
Sbjct: 560 QAPVTTTIALDDFSCKHLADGNHASGLCKSVFYICANGQVVATTCPANLIFNPYVGECDY 619
Query: 488 PDEVADC 508
V DC
Sbjct: 620 STNVRDC 626
Score = 31.9 bits (69), Expect = 0.28
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +2
Query: 380 DARNCSG-FRNCVNGVGYDFVCPDXLAFNSETYRCEWPDEVADC 508
D CS F C NG + CP+ L + + C++P+ V DC
Sbjct: 213 DNVKCSPYFWQCSNGKLFRKTCPEKLIYVLDQNLCDFPESVKDC 256
Score = 31.9 bits (69), Expect = 0.28
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +2
Query: 347 CPHQFGYFKLGDARNCSGFRNCVNGVGYDFVCPDXLAFNSETYRCEW 487
C ++ G F + + + F +C NGVG C D L F++ CE+
Sbjct: 353 CKNRDGIFGIKECH--ASFLSCDNGVGRVIQCADNLVFDTRVSACEF 397
Score = 30.7 bits (66), Expect = 0.65
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +2
Query: 173 GSCDRYIECINGTAEEKLCPDGLRYN 250
G +Y++C+N E+ CP+GL ++
Sbjct: 53 GCSSKYLQCVNNVEYEQSCPEGLYFD 78
>U40942-4|AAC47069.2| 486|Caenorhabditis elegans Hypothetical
protein K02E10.4a protein.
Length = 486
Score = 35.5 bits (78), Expect = 0.023
Identities = 28/103 (27%), Positives = 43/103 (41%)
Frame = +2
Query: 152 NERXPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPCLERSSLQPP 331
N + P S R ++C+ GT++ +C G +N Y C NE + S P
Sbjct: 97 NGQLPKLDSSLRPLQCLPGTSQHLIC--GANHNCFFTGLNYMCCPSNEPSIDNQPSCPYP 154
Query: 332 QPTELCPHQFGYFKLGDARNCSGFRNCVNGVGYDFVCPDXLAF 460
+ T L PH AR+C G VG ++C + +F
Sbjct: 155 KLTVLDPHGLPMKCSQIARSCPGENMHCADVGLGYICCEDPSF 197
>L16679-1|AAA28092.5| 2104|Caenorhabditis elegans Muscle positioning
protein 4 protein.
Length = 2104
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Frame = +2
Query: 380 DARNCSGFRNCVNGVGYDFVCPDXLAF--NSETYRCEWP 490
D +C C G G +F+C F N T +CE P
Sbjct: 736 DVHSCPANSKCEKGAGGEFICKCDAGFQRNGRTNKCEAP 774
>AF289202-1|AAK69172.1| 2104|Caenorhabditis elegans transmembrane
matrix receptor MUP-4 protein.
Length = 2104
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Frame = +2
Query: 380 DARNCSGFRNCVNGVGYDFVCPDXLAF--NSETYRCEWP 490
D +C C G G +F+C F N T +CE P
Sbjct: 736 DVHSCPANSKCEKGAGGEFICKCDAGFQRNGRTNKCEAP 774
>Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical
protein C07G2.1b protein.
Length = 160
Score = 28.7 bits (61), Expect = 2.6
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 434 FVCPDXLAFNSETYRCEWPDEVADC 508
F+C + L F+ E RC D++A+C
Sbjct: 128 FICENGLFFSPEQARCAPADQIAEC 152
>AL132895-2|CAC14404.1| 613|Caenorhabditis elegans Hypothetical
protein Y59A8A.2 protein.
Length = 613
Score = 28.7 bits (61), Expect = 2.6
Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Frame = +2
Query: 299 PCLERSSLQPPQPTELCPHQFGYFKLGDARNCSGFRNC---VNGVGY 430
PCL +L PP E CP +FG FK D R C +GV Y
Sbjct: 154 PCLYGLTL-PPH-CEFCPSRFGAFKRADIRGRWAHAICALYTHGVNY 198
>U21321-11|AAG00044.1| 460|Caenorhabditis elegans Hypothetical
protein ZK177.1 protein.
Length = 460
Score = 28.3 bits (60), Expect = 3.4
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = +2
Query: 47 YTQTQYQPFGQTNRFQNQYQGTSTSQAYWDNAGELNERXPVSGSCDRYIECINGTAEEKL 226
YTQ P QTN + Q + + Y+ + + + G+C +I+ ING +E +
Sbjct: 379 YTQYSQGPINQTNIQEVQSEDSEGIYEYFVDQPNYSNQGTNQGTCQGFIQ-INGNFQENV 437
>U40421-1|AAA81437.2| 178|Caenorhabditis elegans Helix loop helix
protein 8 protein.
Length = 178
Score = 27.5 bits (58), Expect = 6.0
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +2
Query: 275 PCQYPNEVPCLERSSLQPPQPTELCPH 355
P P+++P L+ + + PP P+ + PH
Sbjct: 110 PIAGPSQLPPLQSAHIPPPAPSSIPPH 136
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 27.5 bits (58), Expect = 6.0
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Frame = +2
Query: 392 CSGFRNCVNGVGYDFVC---PDXLAFNSETYRCEWPDE 496
C+GF+ VN G F C P AFN E C P++
Sbjct: 1164 CTGFKKMVNITGRTFYCGPLPVVPAFNPEQTTCCDPEK 1201
>AF037063-1|AAC26105.1| 178|Caenorhabditis elegans twist protein.
Length = 178
Score = 27.5 bits (58), Expect = 6.0
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +2
Query: 275 PCQYPNEVPCLERSSLQPPQPTELCPH 355
P P+++P L+ + + PP P+ + PH
Sbjct: 110 PIAGPSQLPPLQSAHIPPPAPSSIPPH 136
>AF000262-7|AAN60523.1| 544|Caenorhabditis elegans Hypothetical
protein C48E7.2 protein.
Length = 544
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/45 (26%), Positives = 20/45 (44%)
Frame = +2
Query: 56 TQYQPFGQTNRFQNQYQGTSTSQAYWDNAGELNERXPVSGSCDRY 190
T + PF + + +GTSTS + +N + P G +Y
Sbjct: 171 TNFDPFAISTNIMEKKEGTSTSDSTSNNRKRKADSTPEDGDAGQY 215
>Z70686-3|CAA94611.1| 364|Caenorhabditis elegans Hypothetical
protein R10H10.3 protein.
Length = 364
Score = 27.1 bits (57), Expect = 8.0
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Frame = +2
Query: 227 CP--DGLRYNPNVNFDVYPCQYPNEVPCLERSSLQPPQPTELCPHQFGYFKLGDARNCSG 400
CP + YN +N +YP YP C S +P + ++ F +F D +C
Sbjct: 41 CPVNNDFYYNGTINSPLYPYNYPPNDKCYYYISAEPGKVLKI---SFSHF---DLESCCD 94
Query: 401 FRNCVNG 421
F +G
Sbjct: 95 FITIYDG 101
>AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein.
Length = 1475
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +2
Query: 248 NPNVNFDVYPCQYPNEVPCLERSSLQPPQP-TELCPHQFG 364
NP V + P Q PN +P PP+P + H FG
Sbjct: 850 NPMVGYPGMPLQSPNHLPLTPSPLSAPPKPFSPEQQHHFG 889
>AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor of
pal-1 protein 3,isoform a protein.
Length = 1475
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +2
Query: 248 NPNVNFDVYPCQYPNEVPCLERSSLQPPQP-TELCPHQFG 364
NP V + P Q PN +P PP+P + H FG
Sbjct: 850 NPMVGYPGMPLQSPNHLPLTPSPLSAPPKPFSPEQQHHFG 889
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,258,512
Number of Sequences: 27780
Number of extensions: 273007
Number of successful extensions: 874
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 867
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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