Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32337
(404 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0037 - 369498-369568,369668-369760,369889-369991,370061-37... 90 7e-19
07_03_0044 - 12758606-12758676,12758765-12758860,12759197-127592... 88 2e-18
02_01_0041 + 279583-281622,281724-282047,282315-282443,282526-28... 88 3e-18
06_03_0163 - 17380601-17380710,17380796-17380856,17381076-173811... 81 4e-16
04_03_0767 + 19389337-19389381,19390586-19390643,19390720-193907... 47 7e-06
08_02_0759 - 20851828-20851932,20852190-20852285,20853231-208533... 45 2e-05
12_01_0526 - 4171313-4171417,4171514-4171597,4171688-4171758,417... 45 3e-05
02_03_0404 + 18648632-18648669,18649319-18649379,18649449-186494... 44 6e-05
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012... 36 0.009
05_04_0374 - 20736615-20737037,20737148-20737639,20738145-207384... 29 1.1
09_02_0467 - 9602816-9602881,9603016-9603097,9603184-9603291,960... 28 3.2
02_04_0170 + 20576149-20576889 28 3.2
12_01_0678 - 5785021-5785484,5785514-5785568 27 4.3
02_02_0645 - 12599888-12600527,12602879-12603192 27 4.3
11_06_0740 - 26824351-26824669,26824749-26825164 27 5.6
04_04_1082 - 30705854-30705871,30706439-30706499,30707376-30707896 27 5.6
05_07_0126 + 27869058-27869805,27869988-27870328,27870430-278705... 27 7.5
>06_01_0037 -
369498-369568,369668-369760,369889-369991,370061-370156,
370227-370293,370379-370446,370606-370681,370890-370975,
371065-371150,371337-371409,371490-371735,371845-371937,
372045-372119,372496-372540,372631-372708,372805-372921,
373865-373894
Length = 500
Score = 89.8 bits (213), Expect = 7e-19
Identities = 38/81 (46%), Positives = 55/81 (67%)
Frame = +3
Query: 162 KVSVNDFIIKAVAAACKRVPTVNSHWMESFIRQFXNVYVSVAXATPTGLITPILHNADSR 341
K+S+ND +IKA A A + VP NS WM FIRQ+ NV ++VA T GL P++ +AD +
Sbjct: 326 KISINDLVIKAAALALRNVPECNSSWMNDFIRQYHNVNINVAVQTEDGLFVPVIRDADKK 385
Query: 342 GIIDLSXNMKQLAQKAKDGKL 404
G+ ++ +KQLAQ+A+D L
Sbjct: 386 GLATIADEVKQLAQRARDNSL 406
Score = 33.9 bits (74), Expect = 0.049
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 2 LPLSGMRETIAKRLTAAKQSIPHYQLSVTVNVE 100
LP + +R+ A RL +KQ+IPHY L+V V+
Sbjct: 274 LPNTQIRKVTANRLLHSKQTIPHYYLTVDTRVD 306
>07_03_0044 -
12758606-12758676,12758765-12758860,12759197-12759299,
12759379-12759474,12759537-12759603,12759682-12759749,
12759898-12759973,12760112-12760197,12760285-12760361,
12761461-12761533,12761627-12761875,12761997-12762089,
12762218-12762292,12762661-12762716,12763473-12763513,
12763907-12764001,12764085-12764158,12765052-12765145,
12765484-12765519
Length = 541
Score = 88.2 bits (209), Expect = 2e-18
Identities = 38/81 (46%), Positives = 56/81 (69%)
Frame = +3
Query: 162 KVSVNDFIIKAVAAACKRVPTVNSHWMESFIRQFXNVYVSVAXATPTGLITPILHNADSR 341
K+S+ND +IKA A A ++VP NS WM FIRQ+ NV ++VA T GL P++ +AD +
Sbjct: 366 KISINDLVIKAAALALRKVPQCNSSWMNDFIRQYHNVNINVAVQTEHGLFVPVIRDADKK 425
Query: 342 GIIDLSXNMKQLAQKAKDGKL 404
G+ ++ +KQLAQ+A+D L
Sbjct: 426 GLGMIAEEVKQLAQRARDNSL 446
Score = 33.9 bits (74), Expect = 0.049
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +2
Query: 2 LPLSGMRETIAKRLTAAKQSIPHYQLSVTVNVE 100
+P + +R+ A RL ++KQ+IPHY L+V V+
Sbjct: 314 VPNAQIRKVTANRLLSSKQTIPHYYLTVDTRVD 346
>02_01_0041 + 279583-281622,281724-282047,282315-282443,282526-282648,
282768-282923,283224-283349,283426-283560,283815-283942,
284037-284148,284233-284547,284655-284771,284871-285166,
285252-285783,287980-288082,288808-288881,288965-289062,
289340-289380,289977-290032,290170-290244,290377-290469,
290602-290850,290930-291002,291681-291766,291853-291938,
292067-292142,292280-292347,292430-292496,292570-292665,
292741-292843,293214-293309,293396-293466
Length = 2047
Score = 87.8 bits (208), Expect = 3e-18
Identities = 37/81 (45%), Positives = 56/81 (69%)
Frame = +3
Query: 162 KVSVNDFIIKAVAAACKRVPTVNSHWMESFIRQFXNVYVSVAXATPTGLITPILHNADSR 341
K+S+ND +IKA A A ++VP NS WM FIRQ+ NV ++VA T GL P++ +AD +
Sbjct: 1872 KISINDLVIKAAALALRKVPQCNSSWMSDFIRQYHNVNINVAVQTEHGLFVPVIRDADKK 1931
Query: 342 GIIDLSXNMKQLAQKAKDGKL 404
G+ ++ +KQ+AQ+A+D L
Sbjct: 1932 GLGTIAEEVKQVAQRARDNSL 1952
Score = 33.9 bits (74), Expect = 0.049
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +2
Query: 2 LPLSGMRETIAKRLTAAKQSIPHYQLSVTVNVE 100
+P + +R+ A RL ++KQ+IPHY L+V V+
Sbjct: 1820 VPNTQIRKVTANRLLSSKQTIPHYYLTVDARVD 1852
>06_03_0163 -
17380601-17380710,17380796-17380856,17381076-17381150,
17381538-17381600,17381679-17381755,17382432-17382515,
17382610-17382654,17382729-17382789,17383658-17384053,
17384220-17384289,17387010-17387083,17387202-17387246,
17387342-17387391,17387846-17387947,17388587-17388620,
17388681-17388758,17388915-17388965,17389082-17389085,
17389182-17389256,17389530-17389624
Length = 549
Score = 80.6 bits (190), Expect = 4e-16
Identities = 42/88 (47%), Positives = 59/88 (67%), Gaps = 2/88 (2%)
Frame = +3
Query: 147 EXADVKVSVNDFIIKAVAAACKRVPTVNSHWM--ESFIRQFXNVYVSVAXATPTGLITPI 320
E VKVSVND +IKAVA A + VP N++W + ++ +V +S+A AT GL+TPI
Sbjct: 394 EQHGVKVSVNDIVIKAVALALRNVPEANAYWNNDKEQAQKCVSVDISIAVATEKGLMTPI 453
Query: 321 LHNADSRGIIDLSXNMKQLAQKAKDGKL 404
+ NAD + I +S +KQLA+KA+ GKL
Sbjct: 454 IRNADQKTISAISSEVKQLAEKARAGKL 481
Score = 31.5 bits (68), Expect = 0.26
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +2
Query: 2 LPLSGMRETIAKRLTAAKQSIPHYQLSVTV 91
+P S +R+ IAKRL +KQ+ PH LS V
Sbjct: 351 IPNSQIRKVIAKRLLESKQTTPHLYLSQDV 380
>04_03_0767 +
19389337-19389381,19390586-19390643,19390720-19390759,
19390859-19390926,19391007-19391081,19391161-19391216,
19391317-19391361,19391450-19391701,19391787-19391881,
19392395-19392485,19392578-19392688,19392788-19392982,
19393071-19393262
Length = 440
Score = 46.8 bits (106), Expect = 7e-06
Identities = 26/82 (31%), Positives = 41/82 (50%)
Frame = +3
Query: 159 VKVSVNDFIIKAVAAACKRVPTVNSHWMESFIRQFXNVYVSVAXATPTGLITPILHNADS 338
VK+ + +KA A + P VN+ I V +SVA T GL+ P++ +AD+
Sbjct: 265 VKLGLMSCFVKAAVTALQNQPIVNAVIDGDDIIYRDYVDISVAVGTSKGLVVPVIRDADN 324
Query: 339 RGIIDLSXNMKQLAQKAKDGKL 404
D+ + LA+KA +G L
Sbjct: 325 MNFADIEKGINALAKKATEGAL 346
>08_02_0759 -
20851828-20851932,20852190-20852285,20853231-20853314,
20853411-20853481,20853568-20853655,20853745-20853936,
20854044-20854931
Length = 507
Score = 45.2 bits (102), Expect = 2e-05
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +3
Query: 165 VSVNDFIIKAVAAACKRVPTVNSHWMESFIRQFX-NVYVSVAXATPTGLITPILHNADSR 341
V++ + KA A A + P VN+ + + N+ ++VA A GLITP+L +AD
Sbjct: 302 VTMTVLLAKAAAMALAQHPVVNASCRDGKSFTYNTNINIAVAVAIDGGLITPVLEDADKL 361
Query: 342 GIIDLSXNMKQLAQKAKDGKL 404
I LS K+L +KA+ +L
Sbjct: 362 DIYLLSQKWKELVKKARAKQL 382
>12_01_0526 -
4171313-4171417,4171514-4171597,4171688-4171758,
4171814-4171891,4174482-4174569,4174659-4174850,
4174939-4175802
Length = 493
Score = 44.8 bits (101), Expect = 3e-05
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +3
Query: 165 VSVNDFIIKAVAAACKRVPTVNSHWMESFIRQFXN-VYVSVAXATPTGLITPILHNADSR 341
V+++ + KA A A + P +NS + + + + ++VA A GLITP+L +AD
Sbjct: 294 VTMSALLAKATAMALVQHPVINSSCRDGKSFTYNSSINIAVAVAIDGGLITPVLPDADKL 353
Query: 342 GIIDLSXNMKQLAQKAKDGKL 404
I LS K+L KA+ +L
Sbjct: 354 DIYSLSRKWKELVDKARAKQL 374
>02_03_0404 +
18648632-18648669,18649319-18649379,18649449-18649476,
18649787-18649861,18649929-18649984,18650085-18650129,
18650224-18650475,18650586-18650680,18651114-18651204,
18651356-18651466,18651556-18651750,18651827-18652018
Length = 412
Score = 43.6 bits (98), Expect = 6e-05
Identities = 24/84 (28%), Positives = 41/84 (48%)
Frame = +3
Query: 147 EXADVKVSVNDFIIKAVAAACKRVPTVNSHWMESFIRQFXNVYVSVAXATPTGLITPILH 326
E VK+ + +KA +A + P VN+ I + +SVA T GL+ ++H
Sbjct: 233 EKHGVKLGLMSCFVKAAVSALQNQPIVNAVIDGDDIIYREYIDISVAVGTSKGLVVLVIH 292
Query: 327 NADSRGIIDLSXNMKQLAQKAKDG 398
+ D+ D+ + LA+KA +G
Sbjct: 293 DIDAMNFADIEKGINNLAKKATEG 316
>09_04_0081 -
14400293-14400397,14400953-14401036,14401144-14401214,
14401293-14401380,14401487-14401678,14401772-14402704
Length = 490
Score = 36.3 bits (80), Expect = 0.009
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +3
Query: 183 IIKAVAAACKRVPTVNSHWMESFIRQFXN-VYVSVAXATPTGLITPILHNADSRGIIDLS 359
++KA A A + P VN+ + + + + ++VA A GL+TP+L + D + L+
Sbjct: 323 LVKAAAMALTQHPVVNASCRDGKSFSYNSSINIAVAVAIEGGLLTPVLEDVDKLDVYLLA 382
Query: 360 XNMKQLAQKAK 392
+ L +KA+
Sbjct: 383 QKWRGLLKKAR 393
>05_04_0374 -
20736615-20737037,20737148-20737639,20738145-20738422,
20738576-20738732
Length = 449
Score = 29.5 bits (63), Expect = 1.1
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 193 PWRLPASACLQSTHIGW 243
PW LPA +CLQS + W
Sbjct: 48 PWDLPAQSCLQSRDLEW 64
>09_02_0467 -
9602816-9602881,9603016-9603097,9603184-9603291,
9603803-9603900,9603986-9604084,9604202-9604339,
9604748-9604799,9604876-9604989,9605054-9605142,
9605674-9605707,9605900-9606019,9606138-9606220
Length = 360
Score = 27.9 bits (59), Expect = 3.2
Identities = 12/25 (48%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Frame = -2
Query: 88 GDTELVVR-DALFSGRQPLGDGLPH 17
G L VR DA+F+G++P+ G+PH
Sbjct: 128 GKDLLFVRPDAVFNGQKPISGGIPH 152
>02_04_0170 + 20576149-20576889
Length = 246
Score = 27.9 bits (59), Expect = 3.2
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = -2
Query: 100 LDVDGDTELVVRDALFSGRQPLGDG 26
++ DGD ++V+ DA +G++ +GDG
Sbjct: 34 VESDGDDDVVIVDACNNGKRKVGDG 58
>12_01_0678 - 5785021-5785484,5785514-5785568
Length = 172
Score = 27.5 bits (58), Expect = 4.3
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = -2
Query: 88 GDTELVVRDALFSGRQPLGDGLPHAGQRQ 2
G ELVV DA+ GRQ L L HAG R+
Sbjct: 65 GGAELVVLDAVIRGRQ-LHASLLHAGGRR 92
>02_02_0645 - 12599888-12600527,12602879-12603192
Length = 317
Score = 27.5 bits (58), Expect = 4.3
Identities = 16/80 (20%), Positives = 36/80 (45%)
Frame = +3
Query: 144 SEXADVKVSVNDFIIKAVAAACKRVPTVNSHWMESFIRQFXNVYVSVAXATPTGLITPIL 323
S D+ + V++ + A AA + T+ + W +SF+ +Y+S ++ L +
Sbjct: 59 SHQGDI-MEVDEAVAMARAAVDRAAGTMEAFWADSFVTDGLLLYISERASSLKSLQLSMC 117
Query: 324 HNADSRGIIDLSXNMKQLAQ 383
N + G+ + +L +
Sbjct: 118 LNVSNEGMAEAMKGFPRLEE 137
>11_06_0740 - 26824351-26824669,26824749-26825164
Length = 244
Score = 27.1 bits (57), Expect = 5.6
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -1
Query: 269 VXELSYERLHPM*VDCRHALAGSRHGFNDEV 177
V ELSY+ + HA+A SR GFND +
Sbjct: 63 VRELSYD-IEDCIDHYEHAMANSRSGFNDNI 92
>04_04_1082 - 30705854-30705871,30706439-30706499,30707376-30707896
Length = 199
Score = 27.1 bits (57), Expect = 5.6
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = -2
Query: 88 GDTELVVRDALFSGRQPLGDGLPHAGQRQ 2
G ELVV DA+ GRQ L L HAG R+
Sbjct: 67 GGAELVVLDAVIWGRQ-LHTSLLHAGGRR 94
>05_07_0126 +
27869058-27869805,27869988-27870328,27870430-27870510,
27870978-27871073,27871152-27871307,27871575-27871721
Length = 522
Score = 26.6 bits (56), Expect = 7.5
Identities = 12/49 (24%), Positives = 26/49 (53%)
Frame = +3
Query: 114 MXKLVNERLASEXADVKVSVNDFIIKAVAAACKRVPTVNSHWMESFIRQ 260
+ +L + E D+++ V+ + + A +R+ VNS + ES+I +
Sbjct: 397 LSRLYEAGVIDEHRDMRLDVDSMTYEELVALEERIGNVNSGFTESYIEE 445
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,473,239
Number of Sequences: 37544
Number of extensions: 154588
Number of successful extensions: 374
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 364
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 373
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 706675332
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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