Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32337
(404 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77659-4|CAB01163.1| 507|Caenorhabditis elegans Hypothetical pr... 103 5e-23
Z81044-2|CAB02813.1| 337|Caenorhabditis elegans Hypothetical pr... 80 7e-16
AF047653-6|AAC04462.2| 463|Caenorhabditis elegans Hypothetical ... 55 2e-08
Z74035-3|CAA98481.1| 808|Caenorhabditis elegans Hypothetical pr... 27 3.9
U88308-17|AAK68214.1| 657|Caenorhabditis elegans Uncoordinated ... 27 5.1
U88308-16|AAK68212.1| 586|Caenorhabditis elegans Uncoordinated ... 27 5.1
U88308-15|AAK68218.1| 548|Caenorhabditis elegans Uncoordinated ... 27 5.1
U88308-14|AAK68213.1| 546|Caenorhabditis elegans Uncoordinated ... 27 5.1
U88308-13|AAK68215.1| 534|Caenorhabditis elegans Uncoordinated ... 27 5.1
U88308-12|AAK68216.1| 467|Caenorhabditis elegans Uncoordinated ... 27 5.1
AF144261-1|AAD37369.1| 456|Caenorhabditis elegans AP180-like ad... 27 5.1
AF144260-1|AAD37368.1| 535|Caenorhabditis elegans AP180-like ad... 27 5.1
AF144259-1|AAD37367.1| 546|Caenorhabditis elegans AP180-like ad... 27 5.1
AF144258-1|AAD37366.1| 548|Caenorhabditis elegans AP180-like ad... 27 5.1
AF144257-1|AAD37365.1| 586|Caenorhabditis elegans AP180-like ad... 27 5.1
>Z77659-4|CAB01163.1| 507|Caenorhabditis elegans Hypothetical
protein F23B12.5 protein.
Length = 507
Score = 103 bits (247), Expect = 5e-23
Identities = 46/81 (56%), Positives = 65/81 (80%)
Frame = +3
Query: 162 KVSVNDFIIKAVAAACKRVPTVNSHWMESFIRQFXNVYVSVAXATPTGLITPILHNADSR 341
K+S+NDFIIKA A AC+RVP NS+WM+SFIR+ +V VSVA +TP GLITPI+ NA ++
Sbjct: 333 KISINDFIIKASALACQRVPEANSYWMDSFIRENHHVDVSVAVSTPAGLITPIIFNAHAK 392
Query: 342 GIIDLSXNMKQLAQKAKDGKL 404
G+ ++ + +LAQ+A++GKL
Sbjct: 393 GLATIASEIVELAQRAREGKL 413
Score = 44.0 bits (99), Expect = 4e-05
Identities = 18/33 (54%), Positives = 26/33 (78%)
Frame = +2
Query: 2 LPLSGMRETIAKRLTAAKQSIPHYQLSVTVNVE 100
+PLS MR+TIAKRLT +K +IPHY L+ + ++
Sbjct: 278 IPLSNMRKTIAKRLTESKSTIPHYYLTSEIQLD 310
>Z81044-2|CAB02813.1| 337|Caenorhabditis elegans Hypothetical
protein C30H6.7 protein.
Length = 337
Score = 79.8 bits (188), Expect = 7e-16
Identities = 41/80 (51%), Positives = 55/80 (68%)
Frame = +3
Query: 165 VSVNDFIIKAVAAACKRVPTVNSHWMESFIRQFXNVYVSVAXATPTGLITPILHNADSRG 344
VS+NDFIIKA A A + VPTVN W I +V +SVA ATPTGLITPI+ N+D G
Sbjct: 151 VSLNDFIIKAAALALRSVPTVNVRWTPEGIG-LGSVDISVAVATPTGLITPIVENSDILG 209
Query: 345 IIDLSXNMKQLAQKAKDGKL 404
++ +S +K+L+ A++ KL
Sbjct: 210 VLAISSKVKELSGLARESKL 229
Score = 42.3 bits (95), Expect = 1e-04
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = +2
Query: 2 LPLSGMRETIAKRLTAAKQSIPHYQLSVTVNVE 100
+PLS +R TIAKRLTA+KQ IPH V V ++
Sbjct: 103 IPLSNIRATIAKRLTASKQQIPHEYQGVDVRID 135
>AF047653-6|AAC04462.2| 463|Caenorhabditis elegans Hypothetical
protein W02F12.5 protein.
Length = 463
Score = 54.8 bits (126), Expect = 2e-08
Identities = 30/82 (36%), Positives = 44/82 (53%)
Frame = +3
Query: 159 VKVSVNDFIIKAVAAACKRVPTVNSHWMESFIRQFXNVYVSVAXATPTGLITPILHNADS 338
VK+ + ++A A A + P VN+ E+ I V +SVA ATP GL+ P+L N +S
Sbjct: 288 VKLGMMSPFVRAAAYALQESPVVNAVLDENEIVYRHFVDISVAVATPKGLVVPVLRNVES 347
Query: 339 RGIIDLSXNMKQLAQKAKDGKL 404
+ + L KA+DGKL
Sbjct: 348 MNYAQIELELANLGVKARDGKL 369
>Z74035-3|CAA98481.1| 808|Caenorhabditis elegans Hypothetical
protein F47G9.4 protein.
Length = 808
Score = 27.5 bits (58), Expect = 3.9
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 17 MRETIAKRLTAAKQSIPHYQLSVTVNVE*NPR 112
+RET + LTAAKQ +P+ + +N +P+
Sbjct: 458 LRETARQILTAAKQLVPYVSCILNMNAMIDPK 489
>U88308-17|AAK68214.1| 657|Caenorhabditis elegans Uncoordinated
protein 11, isoform c protein.
Length = 657
Score = 27.1 bits (57), Expect = 5.1
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 2 LPLSGMRETIAKRLTAAKQSIPHYQLSVTV 91
+P + +TI+ RLTAAK S+ QL T+
Sbjct: 12 MPFTTGGQTISDRLTAAKHSLAGSQLGKTI 41
>U88308-16|AAK68212.1| 586|Caenorhabditis elegans Uncoordinated
protein 11, isoform a protein.
Length = 586
Score = 27.1 bits (57), Expect = 5.1
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 2 LPLSGMRETIAKRLTAAKQSIPHYQLSVTV 91
+P + +TI+ RLTAAK S+ QL T+
Sbjct: 12 MPFTTGGQTISDRLTAAKHSLAGSQLGKTI 41
>U88308-15|AAK68218.1| 548|Caenorhabditis elegans Uncoordinated
protein 11, isoform h protein.
Length = 548
Score = 27.1 bits (57), Expect = 5.1
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 2 LPLSGMRETIAKRLTAAKQSIPHYQLSVTV 91
+P + +TI+ RLTAAK S+ QL T+
Sbjct: 12 MPFTTGGQTISDRLTAAKHSLAGSQLGKTI 41
>U88308-14|AAK68213.1| 546|Caenorhabditis elegans Uncoordinated
protein 11, isoform b protein.
Length = 546
Score = 27.1 bits (57), Expect = 5.1
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 2 LPLSGMRETIAKRLTAAKQSIPHYQLSVTV 91
+P + +TI+ RLTAAK S+ QL T+
Sbjct: 12 MPFTTGGQTISDRLTAAKHSLAGSQLGKTI 41
>U88308-13|AAK68215.1| 534|Caenorhabditis elegans Uncoordinated
protein 11, isoform d protein.
Length = 534
Score = 27.1 bits (57), Expect = 5.1
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 2 LPLSGMRETIAKRLTAAKQSIPHYQLSVTV 91
+P + +TI+ RLTAAK S+ QL T+
Sbjct: 12 MPFTTGGQTISDRLTAAKHSLAGSQLGKTI 41
>U88308-12|AAK68216.1| 467|Caenorhabditis elegans Uncoordinated
protein 11, isoform e protein.
Length = 467
Score = 27.1 bits (57), Expect = 5.1
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 2 LPLSGMRETIAKRLTAAKQSIPHYQLSVTV 91
+P + +TI+ RLTAAK S+ QL T+
Sbjct: 12 MPFTTGGQTISDRLTAAKHSLAGSQLGKTI 41
>AF144261-1|AAD37369.1| 456|Caenorhabditis elegans AP180-like
adaptor protein protein.
Length = 456
Score = 27.1 bits (57), Expect = 5.1
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 2 LPLSGMRETIAKRLTAAKQSIPHYQLSVTV 91
+P + +TI+ RLTAAK S+ QL T+
Sbjct: 12 MPFTTGGQTISDRLTAAKHSLAGSQLGKTI 41
>AF144260-1|AAD37368.1| 535|Caenorhabditis elegans AP180-like
adaptor protein protein.
Length = 535
Score = 27.1 bits (57), Expect = 5.1
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 2 LPLSGMRETIAKRLTAAKQSIPHYQLSVTV 91
+P + +TI+ RLTAAK S+ QL T+
Sbjct: 12 MPFTTGGQTISDRLTAAKHSLAGSQLGKTI 41
>AF144259-1|AAD37367.1| 546|Caenorhabditis elegans AP180-like
adaptor protein protein.
Length = 546
Score = 27.1 bits (57), Expect = 5.1
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 2 LPLSGMRETIAKRLTAAKQSIPHYQLSVTV 91
+P + +TI+ RLTAAK S+ QL T+
Sbjct: 12 MPFTTGGQTISDRLTAAKHSLAGSQLGKTI 41
>AF144258-1|AAD37366.1| 548|Caenorhabditis elegans AP180-like
adaptor protein protein.
Length = 548
Score = 27.1 bits (57), Expect = 5.1
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 2 LPLSGMRETIAKRLTAAKQSIPHYQLSVTV 91
+P + +TI+ RLTAAK S+ QL T+
Sbjct: 12 MPFTTGGQTISDRLTAAKHSLAGSQLGKTI 41
>AF144257-1|AAD37365.1| 586|Caenorhabditis elegans AP180-like
adaptor protein protein.
Length = 586
Score = 27.1 bits (57), Expect = 5.1
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 2 LPLSGMRETIAKRLTAAKQSIPHYQLSVTV 91
+P + +TI+ RLTAAK S+ QL T+
Sbjct: 12 MPFTTGGQTISDRLTAAKHSLAGSQLGKTI 41
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,288,742
Number of Sequences: 27780
Number of extensions: 112409
Number of successful extensions: 268
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 267
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 641068680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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