Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32336
         (494 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79755-6|CAB02104.1|  192|Caenorhabditis elegans Hypothetical pr...    40   0.001
AF169201-2|AAF01679.1|  192|Caenorhabditis elegans CPN-1 protein.      40   0.001
U97013-5|AAB52338.1|  142|Caenorhabditis elegans Calponin protei...    36   0.021
AF039711-7|AAB96713.3|  154|Caenorhabditis elegans Calponin prot...    33   0.11 
Z92781-5|CAB07179.2| 1391|Caenorhabditis elegans Hypothetical pr...    29   1.4  
U29535-11|AAK31456.1|  947|Caenorhabditis elegans Hypothetical p...    29   1.4  
U23520-5|AAC46554.4|  975|Caenorhabditis elegans Mammalian vav (...    29   1.9  
U23520-4|ABB88236.1| 1007|Caenorhabditis elegans Mammalian vav (...    29   1.9  
DQ136172-1|AAZ66767.1| 1007|Caenorhabditis elegans VAV-1 protein.      29   1.9  
U23147-4|AAC46689.1|  464|Caenorhabditis elegans Hypothetical pr...    28   3.2  
Z36282-2|CAA85288.3|  240|Caenorhabditis elegans Hypothetical pr...    28   4.3  
AL117206-9|CAL22706.1|  292|Caenorhabditis elegans Hypothetical ...    27   5.7  
AL031630-12|CAA20991.1|  375|Caenorhabditis elegans Hypothetical...    27   5.7  
AF040641-1|AAB94947.2|  203|Caenorhabditis elegans Calponin prot...    27   5.7  
AF022974-3|AAC48037.1|  346|Caenorhabditis elegans Seven tm rece...    27   9.9  

>Z79755-6|CAB02104.1|  192|Caenorhabditis elegans Hypothetical
           protein F43G9.9 protein.
          Length = 192

 Score = 39.5 bits (88), Expect = 0.001
 Identities = 22/56 (39%), Positives = 33/56 (58%)
 Frame = +1

Query: 286 VPEEEIFQTADLFERRNIPQVTLCLYALGRITQKHPEFTGPQLGPKMADKNERTXT 453
           V + E+FQT DL+E ++   V +CL +L R ++K+  F    LGPK A  + R  T
Sbjct: 105 VQKSELFQTVDLYEGQDPNAVLICLASLARKSEKN--FGRSGLGPKEAQGDRREWT 158



 Score = 31.9 bits (69), Expect = 0.26
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = +3

Query: 153 GVILCKLANKLAPGSVKKI 209
           G +LC LAN L PGSVKK+
Sbjct: 63  GSLLCTLANSLKPGSVKKV 81


>AF169201-2|AAF01679.1|  192|Caenorhabditis elegans CPN-1 protein.
          Length = 192

 Score = 39.5 bits (88), Expect = 0.001
 Identities = 22/56 (39%), Positives = 33/56 (58%)
 Frame = +1

Query: 286 VPEEEIFQTADLFERRNIPQVTLCLYALGRITQKHPEFTGPQLGPKMADKNERTXT 453
           V + E+FQT DL+E ++   V +CL +L R ++K+  F    LGPK A  + R  T
Sbjct: 105 VQKSELFQTVDLYEGQDPNAVLICLASLARKSEKN--FGRSGLGPKEAQGDRREWT 158



 Score = 31.9 bits (69), Expect = 0.26
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = +3

Query: 153 GVILCKLANKLAPGSVKKI 209
           G +LC LAN L PGSVKK+
Sbjct: 63  GSLLCTLANSLKPGSVKKV 81


>U97013-5|AAB52338.1|  142|Caenorhabditis elegans Calponin protein 3
           protein.
          Length = 142

 Score = 35.5 bits (78), Expect = 0.021
 Identities = 16/34 (47%), Positives = 23/34 (67%)
 Frame = +1

Query: 286 VPEEEIFQTADLFERRNIPQVTLCLYALGRITQK 387
           VP EE FQ+ +L E R++  V + L +LGR+ QK
Sbjct: 101 VPNEETFQSVELVEGRDLFSVCVTLLSLGRVLQK 134



 Score = 30.3 bits (65), Expect = 0.80
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +3

Query: 153 GVILCKLANKLAPGSVKKIQE 215
           G +LCK AN +  GS+KK+Q+
Sbjct: 58  GTLLCKAANGIEAGSIKKVQK 78


>AF039711-7|AAB96713.3|  154|Caenorhabditis elegans Calponin protein
           4 protein.
          Length = 154

 Score = 33.1 bits (72), Expect = 0.11
 Identities = 15/34 (44%), Positives = 23/34 (67%)
 Frame = +1

Query: 286 VPEEEIFQTADLFERRNIPQVTLCLYALGRITQK 387
           V +EE FQ+ DLF+ R++  VT+ L +L R  +K
Sbjct: 104 VKDEETFQSVDLFDGRDLFSVTVTLQSLARKVEK 137



 Score = 27.5 bits (58), Expect = 5.7
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +3

Query: 153 GVILCKLANKLAPGSVKKIQERGTN 227
           G  LCKL N +  GSVKKI +  +N
Sbjct: 61  GQRLCKLVNAIKAGSVKKIMKPISN 85


>Z92781-5|CAB07179.2| 1391|Caenorhabditis elegans Hypothetical
           protein F09C3.1 protein.
          Length = 1391

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = +1

Query: 286 VPEEEIFQTADLFERRNIPQVTLCLYALGRITQK 387
           +PE  I +TAD+FE RN+  V  CL+AL  +  +
Sbjct: 132 LPEIFIPETADVFEGRNMKTV-FCLFALATLLHR 164


>U29535-11|AAK31456.1|  947|Caenorhabditis elegans Hypothetical
           protein C25H3.11 protein.
          Length = 947

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = -2

Query: 292 LVLPYFLDCRLEPLNVLP*AGKLVPLSWIFFTDP 191
           L++ + ++CRL P++++   G L  LS +F  DP
Sbjct: 680 LIVKHMVNCRLRPVSIVYEEGALEGLSTLFSDDP 713


>U23520-5|AAC46554.4|  975|Caenorhabditis elegans Mammalian vav
           (oncogene) relatedprotein 1, isoform a protein.
          Length = 975

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +3

Query: 153 GVILCKLANKLAPGSVKKIQERGTNLPA 236
           G++LC+LAN L P  + + +   TN P+
Sbjct: 39  GILLCRLANTLVPNGIDQKKIMRTNQPS 66


>U23520-4|ABB88236.1| 1007|Caenorhabditis elegans Mammalian vav
           (oncogene) relatedprotein 1, isoform b protein.
          Length = 1007

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +3

Query: 153 GVILCKLANKLAPGSVKKIQERGTNLPA 236
           G++LC+LAN L P  + + +   TN P+
Sbjct: 71  GILLCRLANTLVPNGIDQKKIMRTNQPS 98


>DQ136172-1|AAZ66767.1| 1007|Caenorhabditis elegans VAV-1 protein.
          Length = 1007

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +3

Query: 153 GVILCKLANKLAPGSVKKIQERGTNLPA 236
           G++LC+LAN L P  + + +   TN P+
Sbjct: 71  GILLCRLANTLVPNGIDQKKIMRTNQPS 98


>U23147-4|AAC46689.1|  464|Caenorhabditis elegans Hypothetical
           protein C18H9.5 protein.
          Length = 464

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 21/79 (26%), Positives = 33/79 (41%)
 Frame = +3

Query: 249 FKGSKRQSRKYGSTRRRNIPNRRSF*EA*HSPSNIMFVRSGKNYSKTSRVYRTSART*NG 428
           +  +    +   ST  R I + + F  + H P N+ F +  KN+     V+  S     G
Sbjct: 222 YNDTPNDHKNVSSTELRTIRDGKIFESSKHRPQNVKFTQIFKNW----EVFEISLAIVGG 277

Query: 429 **ERTYLXGKNNFGPTTLN 485
               T +   NN+GP  LN
Sbjct: 278 ---STSVICLNNYGPIYLN 293


>Z36282-2|CAA85288.3|  240|Caenorhabditis elegans Hypothetical
           protein K10G9.2 protein.
          Length = 240

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +3

Query: 186 APGSVKKIQERGTNLPAHGRTFKGSKRQSRKYGS 287
           A  S+  I  R   +P+H  +  GS+RQSR Y +
Sbjct: 87  ASSSLDAIMFRQQPIPSHRHSASGSRRQSRVYSN 120


>AL117206-9|CAL22706.1|  292|Caenorhabditis elegans Hypothetical
           protein Y67A10A.11 protein.
          Length = 292

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +1

Query: 112 PLPNGAYEXCAKGTV*SFANW 174
           P  N  YE C  GT+ + ANW
Sbjct: 82  PRVNATYENCCTGTLTTIANW 102


>AL031630-12|CAA20991.1|  375|Caenorhabditis elegans Hypothetical
           protein Y38H6C.13 protein.
          Length = 375

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = -2

Query: 94  EXPSEQPXCSLVPCFLAGIVCRR 26
           + P +   C L+P ++AG++C+R
Sbjct: 346 DIPEKVFICELLPTYIAGVICQR 368


>AF040641-1|AAB94947.2|  203|Caenorhabditis elegans Calponin protein
           2 protein.
          Length = 203

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = +1

Query: 286 VPEEEIFQTADLFERRNIPQVTLCLYALGRITQ-KHPEFTGPQLGPKMADKNER 444
           V E   FQT DL+E +   +V  CL  L  + Q +      P    K+A  + R
Sbjct: 106 VMEISCFQTVDLYENKQCYKVIECLRLLAAVAQSRSSHLEHPAWVVKLAQSSPR 159


>AF022974-3|AAC48037.1|  346|Caenorhabditis elegans Seven tm
           receptor protein 207 protein.
          Length = 346

 Score = 26.6 bits (56), Expect = 9.9
 Identities = 17/43 (39%), Positives = 25/43 (58%)
 Frame = -3

Query: 444 TFVLISHFRS*LRSCKLGMFLSNSSQSVQT*CYLGNVTPLKKI 316
           T +++  +R+ LRS  L +FLS  S+  QT     NVT L K+
Sbjct: 302 TLIMVKCYRNSLRSY-LRVFLSAVSKMFQTPDVPANVTELSKV 343


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,638,384
Number of Sequences: 27780
Number of extensions: 241174
Number of successful extensions: 554
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 554
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 935344784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)