Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32332
         (329 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83128-1|CAB05635.1|   92|Caenorhabditis elegans Hypothetical pr...   111   1e-25
Z77131-1|CAB00854.1|   91|Caenorhabditis elegans Hypothetical pr...   105   1e-23
AF098986-5|AAC67426.1|  671|Caenorhabditis elegans Hypothetical ...    30   0.34 
U41275-2|AAA82465.1|  438|Caenorhabditis elegans Hypothetical pr...    30   0.45 
Z50742-2|CAA90616.1|  491|Caenorhabditis elegans Hypothetical pr...    27   4.2  
L23646-5|ABD94102.1|  145|Caenorhabditis elegans Hypothetical pr...    25   9.7  
L23646-4|AAA28039.1|  152|Caenorhabditis elegans Hypothetical pr...    25   9.7  

>Z83128-1|CAB05635.1|   92|Caenorhabditis elegans Hypothetical
           protein W01D2.1 protein.
          Length = 92

 Score =  111 bits (267), Expect = 1e-25
 Identities = 48/87 (55%), Positives = 59/87 (67%)
 Frame = -2

Query: 325 MTKGTSXFGKRRNKTHTLCXRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 146
           MTKGT  FGK+  K+HTLC RCG+SS+HIQK +CA CGYP AK R+Y+W  K+       
Sbjct: 1   MTKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYPDAKKRTYNWGAKSIRRRTTG 60

Query: 145 XXRMRHLKIVRRRFRNGFKEGKPTPPK 65
             R RHL+ V  RFRNGF+EG    P+
Sbjct: 61  TGRTRHLRDVNARFRNGFREGTTPKPR 87


>Z77131-1|CAB00854.1|   91|Caenorhabditis elegans Hypothetical
           protein C54C6.1 protein.
          Length = 91

 Score =  105 bits (251), Expect = 1e-23
 Identities = 46/85 (54%), Positives = 56/85 (65%)
 Frame = -2

Query: 325 MTKGTSXFGKRRNKTHTLCXRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 146
           MTKGT  FGK+  K+HTLC RCG+SS+HIQK +CA CGY  AK R+Y+W  K+       
Sbjct: 1   MTKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYQDAKKRTYNWGAKSIRRRTTG 60

Query: 145 XXRMRHLKIVRRRFRNGFKEGKPTP 71
             R RHL+ V  RFRNGF+   P P
Sbjct: 61  TGRTRHLRDVNARFRNGFRGTTPKP 85


>AF098986-5|AAC67426.1|  671|Caenorhabditis elegans Hypothetical
           protein C36C9.4 protein.
          Length = 671

 Score = 30.3 bits (65), Expect = 0.34
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = -2

Query: 304 FGKRRNKTHTLCXRCGRSSYHIQKSKCAQCGYPAA 200
           + K    TH  C +CG+ + +    KC  CG P A
Sbjct: 94  YNKNNFSTHHFCNKCGKVAQN--SKKCKHCGGPVA 126


>U41275-2|AAA82465.1|  438|Caenorhabditis elegans Hypothetical
           protein T25D1.2 protein.
          Length = 438

 Score = 29.9 bits (64), Expect = 0.45
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = -2

Query: 304 FGKRRNKTHTLCXRCGRSSYHIQKSKCAQCGYPAA 200
           + K    TH  C +CG+ + +    KC  CG P A
Sbjct: 166 YNKNNFSTHHFCNKCGKVAQN--SKKCKYCGGPVA 198


>Z50742-2|CAA90616.1|  491|Caenorhabditis elegans Hypothetical
           protein K09A11.2 protein.
          Length = 491

 Score = 26.6 bits (56), Expect = 4.2
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = +2

Query: 2   FMVFLIFIYLAHIDS*RSYSLLGRRWFPFFKTITEAPPDNLQ 127
           F++F+IF Y+ H     S    G    PF   I + PPDN+Q
Sbjct: 8   FVIFIIF-YVFHFYWKVSKYPKGPLPLPFIGNIHQFPPDNVQ 48


>L23646-5|ABD94102.1|  145|Caenorhabditis elegans Hypothetical
           protein F44E2.6b protein.
          Length = 145

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 12/40 (30%), Positives = 16/40 (40%)
 Frame = -2

Query: 322 TKGTSXFGKRRNKTHTLCXRCGRSSYHIQKSKCAQCGYPA 203
           T  T  F     K   +C  CG   ++      A CG+PA
Sbjct: 42  TPHTGGFNDHFEKGRYVCLCCGSELFNSDAKFWAGCGWPA 81


>L23646-4|AAA28039.1|  152|Caenorhabditis elegans Hypothetical
           protein F44E2.6 protein.
          Length = 152

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 12/40 (30%), Positives = 16/40 (40%)
 Frame = -2

Query: 322 TKGTSXFGKRRNKTHTLCXRCGRSSYHIQKSKCAQCGYPA 203
           T  T  F     K   +C  CG   ++      A CG+PA
Sbjct: 49  TPHTGGFNDHFEKGRYVCLCCGSELFNSDAKFWAGCGWPA 88


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,138,519
Number of Sequences: 27780
Number of extensions: 126567
Number of successful extensions: 264
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 264
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 397381406
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)