Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32326
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039041-9|AAB94188.2| 194|Caenorhabditis elegans Troponin i pr... 66 1e-11
AB107583-1|BAD89381.1| 194|Caenorhabditis elegans troponin I 4 ... 66 1e-11
U40951-3|AAG01564.2| 242|Caenorhabditis elegans Uncoordinated p... 60 7e-10
AB107357-1|BAD89378.1| 242|Caenorhabditis elegans troponin I 2 ... 60 7e-10
Z81593-2|CAB04737.1| 260|Caenorhabditis elegans Hypothetical pr... 59 2e-09
AB107359-1|BAD89380.1| 260|Caenorhabditis elegans troponin I 3 ... 59 2e-09
Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical pr... 56 2e-08
AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1 ... 56 2e-08
U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t prot... 39 0.002
U23523-11|AAP68942.2| 324|Caenorhabditis elegans Troponin t pro... 37 0.010
U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t pro... 37 0.010
AF039039-6|AAO25996.1| 308|Caenorhabditis elegans Troponin t pr... 35 0.040
AF039039-5|AAB94176.2| 347|Caenorhabditis elegans Troponin t pr... 35 0.040
U29082-2|AAT92082.1| 350|Caenorhabditis elegans Troponin t prot... 33 0.092
U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T prot... 32 0.21
U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle position... 32 0.21
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 28 4.6
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 28 4.6
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 28 4.6
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 28 4.6
AL110478-10|CAE17956.3| 758|Caenorhabditis elegans Hypothetical... 27 6.0
Z83228-2|CAB05733.1| 370|Caenorhabditis elegans Hypothetical pr... 27 8.0
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 27 8.0
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 27 8.0
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 27 8.0
AL031620-5|CAA20926.1| 277|Caenorhabditis elegans Hypothetical ... 27 8.0
AC024792-2|AAF60680.2| 813|Caenorhabditis elegans Hypothetical ... 27 8.0
>AF039041-9|AAB94188.2| 194|Caenorhabditis elegans Troponin i
protein 4 protein.
Length = 194
Score = 66.5 bits (155), Expect = 1e-11
Identities = 30/55 (54%), Positives = 39/55 (70%)
Frame = +1
Query: 352 NEDTIKRVCKDYHERIARLEDEKFDLEYIVXRKDMEISDLNSQVNDLRGKFVKPT 516
NED ++ V + ER+ LE E +D+ YIV +KD EI++L VNDLRGKFVKPT
Sbjct: 87 NEDDLEAVYDEIRERLIDLESENYDVSYIVRQKDFEINELTIAVNDLRGKFVKPT 141
>AB107583-1|BAD89381.1| 194|Caenorhabditis elegans troponin I 4
protein.
Length = 194
Score = 66.5 bits (155), Expect = 1e-11
Identities = 30/55 (54%), Positives = 39/55 (70%)
Frame = +1
Query: 352 NEDTIKRVCKDYHERIARLEDEKFDLEYIVXRKDMEISDLNSQVNDLRGKFVKPT 516
NED ++ V + ER+ LE E +D+ YIV +KD EI++L VNDLRGKFVKPT
Sbjct: 87 NEDDLEAVYDEIRERLIDLESENYDVSYIVRQKDFEINELTIAVNDLRGKFVKPT 141
>U40951-3|AAG01564.2| 242|Caenorhabditis elegans Uncoordinated
protein 27 protein.
Length = 242
Score = 60.5 bits (140), Expect = 7e-10
Identities = 26/60 (43%), Positives = 43/60 (71%)
Frame = +1
Query: 337 NIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVXRKDMEISDLNSQVNDLRGKFVKPT 516
+IDD + ++++ D R+ +LE+EK+D+ Y+V + + EI+ L +VNDLRGKFVKP+
Sbjct: 88 SIDDKGQ--LEKIYNDLWARLTQLEEEKYDINYVVSQTEAEINSLTIEVNDLRGKFVKPS 145
>AB107357-1|BAD89378.1| 242|Caenorhabditis elegans troponin I 2
protein.
Length = 242
Score = 60.5 bits (140), Expect = 7e-10
Identities = 26/60 (43%), Positives = 43/60 (71%)
Frame = +1
Query: 337 NIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVXRKDMEISDLNSQVNDLRGKFVKPT 516
+IDD + ++++ D R+ +LE+EK+D+ Y+V + + EI+ L +VNDLRGKFVKP+
Sbjct: 88 SIDDKGQ--LEKIYNDLWARLTQLEEEKYDINYVVSQTEAEINSLTIEVNDLRGKFVKPS 145
>Z81593-2|CAB04737.1| 260|Caenorhabditis elegans Hypothetical
protein T20B3.2 protein.
Length = 260
Score = 59.3 bits (137), Expect = 2e-09
Identities = 27/61 (44%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Frame = +1
Query: 337 NIDDANED-TIKRVCKDYHERIARLEDEKFDLEYIVXRKDMEISDLNSQVNDLRGKFVKP 513
++D N+ + ++ +D R+ LE+EKFD+ + V + + EI+ L QVNDLRGKFVKP
Sbjct: 97 DVDSINDQGQLLKIYEDMFARVCALEEEKFDINFGVSQTEAEINQLTIQVNDLRGKFVKP 156
Query: 514 T 516
T
Sbjct: 157 T 157
>AB107359-1|BAD89380.1| 260|Caenorhabditis elegans troponin I 3
protein.
Length = 260
Score = 59.3 bits (137), Expect = 2e-09
Identities = 27/61 (44%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Frame = +1
Query: 337 NIDDANED-TIKRVCKDYHERIARLEDEKFDLEYIVXRKDMEISDLNSQVNDLRGKFVKP 513
++D N+ + ++ +D R+ LE+EKFD+ + V + + EI+ L QVNDLRGKFVKP
Sbjct: 97 DVDSINDQGQLLKIYEDMFARVCALEEEKFDINFGVSQTEAEINQLTIQVNDLRGKFVKP 156
Query: 514 T 516
T
Sbjct: 157 T 157
>Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical
protein F42E11.4 protein.
Length = 250
Score = 56.0 bits (129), Expect = 2e-08
Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Frame = +1
Query: 337 NIDDANEDT-IKRVCKDYHERIARLEDEKFDLEYIVXRKDMEISDLNSQVNDLRGKFVKP 513
N+D ++ ++ + D R+ LE+EK+D+ +I + I+ LN +VNDLRGKFVKP
Sbjct: 97 NVDSIDDHAKLEAIYNDLFSRLCNLEEEKYDINHITTETETTINQLNIEVNDLRGKFVKP 156
Query: 514 T 516
+
Sbjct: 157 S 157
>AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1
protein.
Length = 250
Score = 56.0 bits (129), Expect = 2e-08
Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Frame = +1
Query: 337 NIDDANEDT-IKRVCKDYHERIARLEDEKFDLEYIVXRKDMEISDLNSQVNDLRGKFVKP 513
N+D ++ ++ + D R+ LE+EK+D+ +I + I+ LN +VNDLRGKFVKP
Sbjct: 97 NVDSIDDHAKLEAIYNDLFSRLCNLEEEKYDINHITTETETTINQLNIEVNDLRGKFVKP 156
Query: 514 T 516
+
Sbjct: 157 S 157
>U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t protein
3, isoform b protein.
Length = 1178
Score = 38.7 bits (86), Expect = 0.002
Identities = 16/48 (33%), Positives = 29/48 (60%)
Frame = +1
Query: 337 NIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVXRKDMEISDLNSQ 480
N + + +K K+ H+RI +LE EK+DLE R++ ++ +LN +
Sbjct: 1043 NASEVPQSELKAKIKELHQRICKLETEKYDLEKRHERQEYDMKELNER 1090
>U23523-11|AAP68942.2| 324|Caenorhabditis elegans Troponin t
protein 2, isoform b protein.
Length = 324
Score = 36.7 bits (81), Expect = 0.010
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +1
Query: 328 KPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVXRKDMEISDLNSQVNDL-RGKF 504
K +++ + +K K H RI +LE EK+DLE R++ ++ +LN + + R K
Sbjct: 125 KAQDVSTLMPNDLKERIKGIHARIVKLEGEKYDLEKRRERQEYDLKELNERQRQVARNKA 184
Query: 505 VK 510
+K
Sbjct: 185 LK 186
>U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t
protein 2, isoform a protein.
Length = 428
Score = 36.7 bits (81), Expect = 0.010
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +1
Query: 328 KPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVXRKDMEISDLNSQVNDL-RGKF 504
K +++ + +K K H RI +LE EK+DLE R++ ++ +LN + + R K
Sbjct: 229 KAQDVSTLMPNDLKERIKGIHARIVKLEGEKYDLEKRRERQEYDLKELNERQRQVARNKA 288
Query: 505 VK 510
+K
Sbjct: 289 LK 290
>AF039039-6|AAO25996.1| 308|Caenorhabditis elegans Troponin t
protein 4, isoform b protein.
Length = 308
Score = 34.7 bits (76), Expect = 0.040
Identities = 14/39 (35%), Positives = 26/39 (66%)
Frame = +1
Query: 364 IKRVCKDYHERIARLEDEKFDLEYIVXRKDMEISDLNSQ 480
+K K+ H+RI +LE +K+DLE R++ ++ +LN +
Sbjct: 216 MKAKIKELHQRICKLEAQKYDLEKRHERQEYDLKELNER 254
>AF039039-5|AAB94176.2| 347|Caenorhabditis elegans Troponin t
protein 4, isoform a protein.
Length = 347
Score = 34.7 bits (76), Expect = 0.040
Identities = 14/39 (35%), Positives = 26/39 (66%)
Frame = +1
Query: 364 IKRVCKDYHERIARLEDEKFDLEYIVXRKDMEISDLNSQ 480
+K K+ H+RI +LE +K+DLE R++ ++ +LN +
Sbjct: 216 MKAKIKELHQRICKLEAQKYDLEKRHERQEYDLKELNER 254
>U29082-2|AAT92082.1| 350|Caenorhabditis elegans Troponin t protein
3, isoform a protein.
Length = 350
Score = 33.5 bits (73), Expect = 0.092
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +1
Query: 337 NIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVXRKDMEISDL 471
N + + +K K+ H+RI +LE EK+DLE R++ + L
Sbjct: 209 NASEVPQSELKAKIKELHQRICKLETEKYDLEKRHERQEYDPKQL 253
>U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T
protein.
Length = 405
Score = 32.3 bits (70), Expect = 0.21
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +1
Query: 364 IKRVCKDYHERIARLEDEKFDLEYIVXRKDMEISDLNS-QVNDLRGKFVK 510
+K + H RI +LE EK+DLE R+D ++ +L+ Q R K +K
Sbjct: 232 LKERIRGLHARIVKLEAEKYDLEKRRERQDYDMKELHERQRQAARNKALK 281
>U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle positioning
protein 2 protein.
Length = 405
Score = 32.3 bits (70), Expect = 0.21
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +1
Query: 364 IKRVCKDYHERIARLEDEKFDLEYIVXRKDMEISDLNS-QVNDLRGKFVK 510
+K + H RI +LE EK+DLE R+D ++ +L+ Q R K +K
Sbjct: 232 LKERIRGLHARIVKLEAEKYDLEKRRERQDYDMKELHERQRQAARNKALK 281
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 27.9 bits (59), Expect = 4.6
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +1
Query: 343 DDA--NEDTIKRVCKDYHERIARLEDEKFDLEYIVXRKDMEISDLNSQVNDLRGKFVKPT 516
DDA D + + E+ +L+ E ++ K+ E +DL + ++DLRG F K T
Sbjct: 686 DDAARKNDALLEDVATWQEKYEQLKMELEEMNRRGQEKEREEADLRALLDDLRGNFDKLT 745
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 27.9 bits (59), Expect = 4.6
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +1
Query: 343 DDA--NEDTIKRVCKDYHERIARLEDEKFDLEYIVXRKDMEISDLNSQVNDLRGKFVKPT 516
DDA D + + E+ +L+ E ++ K+ E +DL + ++DLRG F K T
Sbjct: 686 DDAARKNDALLEDVATWQEKYEQLKMELEEMNRRGQEKEREEADLRALLDDLRGNFDKLT 745
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 27.9 bits (59), Expect = 4.6
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +1
Query: 343 DDA--NEDTIKRVCKDYHERIARLEDEKFDLEYIVXRKDMEISDLNSQVNDLRGKFVKPT 516
DDA D + + E+ +L+ E ++ K+ E +DL + ++DLRG F K T
Sbjct: 446 DDAARKNDALLEDVATWQEKYEQLKMELEEMNRRGQEKEREEADLRALLDDLRGNFDKLT 505
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 27.9 bits (59), Expect = 4.6
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +1
Query: 343 DDA--NEDTIKRVCKDYHERIARLEDEKFDLEYIVXRKDMEISDLNSQVNDLRGKFVKPT 516
DDA D + + E+ +L+ E ++ K+ E +DL + ++DLRG F K T
Sbjct: 686 DDAARKNDALLEDVATWQEKYEQLKMELEEMNRRGQEKEREEADLRALLDDLRGNFDKLT 745
>AL110478-10|CAE17956.3| 758|Caenorhabditis elegans Hypothetical
protein Y26D4A.13 protein.
Length = 758
Score = 27.5 bits (58), Expect = 6.0
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +1
Query: 355 EDTIKRVCKDYHERIARLEDEKFDLEY 435
ED + R+C+ Y + + R+ + + +LEY
Sbjct: 671 EDVVNRLCESYKKLLVRVAELETELEY 697
>Z83228-2|CAB05733.1| 370|Caenorhabditis elegans Hypothetical
protein F52F12.2 protein.
Length = 370
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -1
Query: 162 CACAPQRACGRFRPVWPSSPPRDAFFHHPPLL 67
C C P+R+ R P SSP D F P LL
Sbjct: 269 CPC-PRRSSSRVSPSGGSSPISDTFIASPTLL 299
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 343 DDANEDTIKRVCKDYHERIARLEDEKFDLEYIVXRKDMEISDL 471
D+ E I+ V + + RLE+EK DLE + + E+S +
Sbjct: 1072 DELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQI 1114
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 343 DDANEDTIKRVCKDYHERIARLEDEKFDLEYIVXRKDMEISDL 471
D+ E I+ V + + RLE+EK DLE + + E+S +
Sbjct: 1145 DELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQI 1187
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 343 DDANEDTIKRVCKDYHERIARLEDEKFDLEYIVXRKDMEISDL 471
D+ E I+ V + + RLE+EK DLE + + E+S +
Sbjct: 1145 DELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQI 1187
>AL031620-5|CAA20926.1| 277|Caenorhabditis elegans Hypothetical
protein C18B12.5 protein.
Length = 277
Score = 27.1 bits (57), Expect = 8.0
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 334 KNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVXRKDMEISDLNSQVND-LRGKFVK 510
KN N D K + D+H+ +++ + + LEYI +I + S+ N + GKF
Sbjct: 171 KNASILNLDC-KYLPADFHQHLSKFKHLEIKLEYISNEDIDKIKKMISEPNSIMNGKFKS 229
Query: 511 PT 516
T
Sbjct: 230 ST 231
>AC024792-2|AAF60680.2| 813|Caenorhabditis elegans Hypothetical
protein Y48G1A.4 protein.
Length = 813
Score = 27.1 bits (57), Expect = 8.0
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 132 DRKRAEVRKRMVGGLQSQKGE 194
DR R KR++GGL Q+GE
Sbjct: 776 DRARIAATKRVMGGLMQQQGE 796
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,285,415
Number of Sequences: 27780
Number of extensions: 120395
Number of successful extensions: 474
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 474
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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