Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32315
(421 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1195 + 24711873-24712060,24712306-24712345,24712395-247124... 30 0.87
06_01_0474 - 3362734-3362827,3363179-3363366,3363458-3363700,336... 29 2.0
05_01_0460 - 3644229-3644420,3644623-3644865,3644959-3645237,364... 29 2.0
03_02_0345 + 7664564-7665277,7665672-7665921,7665996-7666015 28 2.7
02_04_0625 - 24547435-24547569,24547674-24547742,24547871-245479... 28 2.7
01_06_0723 + 31501900-31502808,31502846-31503295 28 2.7
10_02_0187 - 6447189-6448532 28 3.5
07_03_1284 + 25463476-25463557,25465088-25465220,25465307-254653... 28 3.5
07_01_0976 + 8226194-8226473,8227116-8227291,8227366-8227486,822... 28 3.5
10_08_1036 + 22470642-22470664,22470850-22471024,22471133-22473766 27 4.6
02_05_0854 - 32267047-32267298,32267383-32268194,32268289-322684... 27 4.6
02_05_0853 + 32261705-32261794,32261895-32262027,32262117-322629... 27 4.6
01_06_0490 + 29759801-29759880,29759881-29759980,29760468-297605... 27 6.1
04_03_0818 + 20014685-20014687,20014792-20014831,20014988-200150... 27 8.1
01_03_0304 - 14838977-14838988,14839291-14840302,14840414-148406... 27 8.1
>07_03_1195 +
24711873-24712060,24712306-24712345,24712395-24712483,
24712759-24712933
Length = 163
Score = 29.9 bits (64), Expect = 0.87
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +3
Query: 24 LWPRASCSPARLLMVTDGGDKLTSTAXKDESLGTRNYARTRYAGEWFRLV 173
+W SC +R LMV+ D ++ K+ T +A E FR+V
Sbjct: 22 IWINGSCENSRQLMVSSSNDSQRASRGKNSCQPTGKFAAMPAISESFRVV 71
>06_01_0474 -
3362734-3362827,3363179-3363366,3363458-3363700,
3363820-3364098,3364189-3364386,3364475-3365110,
3365209-3365463,3365579-3365685,3365770-3369566,
3369677-3370166,3370918-3371308,3371481-3371573,
3371687-3371810,3372544-3372791
Length = 2380
Score = 28.7 bits (61), Expect = 2.0
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -1
Query: 241 QRIACIPEAVHWMTSRQLS--PSPATSRNHSPAYLVLA 134
+ +A VHW+ SR+ S P P S H L+LA
Sbjct: 819 EAVAIYTTTVHWLESRKFSPIPFPPLSYKHDTKLLILA 856
>05_01_0460 -
3644229-3644420,3644623-3644865,3644959-3645237,
3645328-3645525,3645614-3646249,3646352-3646606,
3646718-3646824,3646909-3650705,3650816-3651305,
3652043-3652433,3652621-3652713,3652818-3652941,
3653871-3654118
Length = 2350
Score = 28.7 bits (61), Expect = 2.0
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -1
Query: 241 QRIACIPEAVHWMTSRQLS--PSPATSRNHSPAYLVLA 134
+ +A VHW+ SR+ S P P S H L+LA
Sbjct: 819 EAVAIYTTTVHWLESRKFSPIPFPPLSYKHDTKLLILA 856
>03_02_0345 + 7664564-7665277,7665672-7665921,7665996-7666015
Length = 327
Score = 28.3 bits (60), Expect = 2.7
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +1
Query: 136 QGQGTPANGSGWWPARATTVATSSSVLPRE 225
+G+G +G GWW R+ + LP E
Sbjct: 177 EGEGAEGSGDGWWKERSVSSYDMRLALPDE 206
>02_04_0625 -
24547435-24547569,24547674-24547742,24547871-24547997,
24548086-24548209,24548714-24548832,24548953-24549044,
24549124-24549329,24549429-24549534,24549636-24549740,
24549836-24549942,24550030-24550253,24550341-24550468,
24550945-24551022,24551338-24552012,24552655-24552798,
24552985-24553064,24553958-24554029,24554124-24554343,
24554460-24554590,24555118-24555243,24555567-24555695,
24556156-24556318,24556408-24556545,24557198-24557317,
24557521-24557682,24557751-24557876,24558172-24558342,
24558435-24558590,24559061-24559408
Length = 1526
Score = 28.3 bits (60), Expect = 2.7
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 137 KDKVRRRMVPAGGR-RGRQLSRRHPVYCLGNTSYTLPG 247
K +R+R++ G R GRQL P+YC +T L G
Sbjct: 360 KQVIRKRIIEKGLRVDGRQLDEVRPLYCESSTYPILHG 397
>01_06_0723 + 31501900-31502808,31502846-31503295
Length = 452
Score = 28.3 bits (60), Expect = 2.7
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 106 KMKAWEQGTMQGQGTPANGSGWWPARATTVATSSSVLP 219
K+ W+ G + G G + +WP R TT+A + +P
Sbjct: 274 KLTNWDLGKL-GHGIVLHAVAYWPLRRTTLAPTQVRMP 310
>10_02_0187 - 6447189-6448532
Length = 447
Score = 27.9 bits (59), Expect = 3.5
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 106 KMKAWEQGTMQGQGTPANGSGWWPARATTVA 198
K+ W+ G + GQG +G +WP + T +A
Sbjct: 272 KLTNWDLGKL-GQGIVLHGVAYWPLKRTALA 301
>07_03_1284 +
25463476-25463557,25465088-25465220,25465307-25465378,
25465476-25465544,25465629-25465700,25465792-25465860,
25466155-25466220,25466299-25466364,25466452-25466786,
25466931-25467214,25467796-25468067,25468152-25468287,
25468625-25468755,25468890-25469046,25469185-25469327,
25470105-25470190,25471530-25472962,25474563-25474712,
25475221-25475322,25475467-25475568
Length = 1319
Score = 27.9 bits (59), Expect = 3.5
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +2
Query: 62 DGHRWRRQADEYGKXR*KLGNKELCKDKVRRRMVPAGGRRGRQLSRRHPVYCLGNT 229
DGH WRR G+ R + + +V+ RMV + G+R R+ ++ V LG +
Sbjct: 680 DGHSWRRD----GESRDQEPWVCIAVARVQARMVGSKGQRWRRRNKHRGVSALGRS 731
>07_01_0976 +
8226194-8226473,8227116-8227291,8227366-8227486,
8228684-8228757,8229269-8229332,8229969-8230039,
8230279-8230368,8230491-8230661,8231668-8231739
Length = 372
Score = 27.9 bits (59), Expect = 3.5
Identities = 25/101 (24%), Positives = 39/101 (38%), Gaps = 6/101 (5%)
Frame = +3
Query: 12 PVSLLWPRASC----SPARLLMVTDGGDKLTSTAXKDESLGTRNYARTRYAGEWFRLVAG 179
P L WPR S SP R+ + +L + L + R + +
Sbjct: 164 PYRLSWPRLSVVYDVSPRRVFITAS--QQLRESPDLQAGLNKNGFNGNRPSLWVLQKWLQ 221
Query: 180 EGDNCRDVIQCTASGIQAIRCPAGLF--FDIEKQTCDWKDA 296
G NC V+ C G A + FD++++ C+WK A
Sbjct: 222 TGRNC--VVSCFRVGSGCCNYAAHVIDKFDLQERKCEWKSA 260
>10_08_1036 + 22470642-22470664,22470850-22471024,22471133-22473766
Length = 943
Score = 27.5 bits (58), Expect = 4.6
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +3
Query: 81 DKLTSTAXKDESLGTRNYARTRYAGEWFRLVAGEGDNCRDVI-QCTASGIQAIRCPAGLF 257
++L S A + + L TR A E LVA E R + + +A+G+ AIR P
Sbjct: 731 EELLSIAREYDGLRTREAAAQAKIDELSSLVA-EASTARKLAGEYSANGVAAIRSPEKQH 789
Query: 258 FDIEKQTCDWKDAVKN 305
K C D V++
Sbjct: 790 NMFRKMICSPMDNVRD 805
>02_05_0854 -
32267047-32267298,32267383-32268194,32268289-32268421,
32268530-32268619
Length = 428
Score = 27.5 bits (58), Expect = 4.6
Identities = 11/21 (52%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = +1
Query: 133 MQGQGTPANGS-GWWPARATT 192
++G+ A G GWWPA+ATT
Sbjct: 288 LRGEDGKAPGMIGWWPAKATT 308
>02_05_0853 +
32261705-32261794,32261895-32262027,32262117-32262928,
32263020-32263271
Length = 428
Score = 27.5 bits (58), Expect = 4.6
Identities = 11/21 (52%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = +1
Query: 133 MQGQGTPANGS-GWWPARATT 192
++G+ A G GWWPA+ATT
Sbjct: 288 LRGEDGKAPGMIGWWPAKATT 308
>01_06_0490 +
29759801-29759880,29759881-29759980,29760468-29760574,
29761305-29761554,29761989-29762111,29762471-29762638,
29762741-29762878,29763206-29763235
Length = 331
Score = 27.1 bits (57), Expect = 6.1
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 142 QGTPANGSGWWPARATT 192
+G P GWWP+RA T
Sbjct: 193 KGKPPGVLGWWPSRAVT 209
>04_03_0818 +
20014685-20014687,20014792-20014831,20014988-20015025,
20015359-20015485,20015571-20015797,20015919-20016064,
20016166-20016284,20016711-20016799,20016881-20017003,
20017123-20017158,20017464-20017562,20017642-20017833
Length = 412
Score = 26.6 bits (56), Expect = 8.1
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 142 QGTPANGSGWWPARATT 192
+G P GWWP+R+ T
Sbjct: 277 EGKPPGVMGWWPSRSVT 293
>01_03_0304 -
14838977-14838988,14839291-14840302,14840414-14840609,
14840795-14841149
Length = 524
Score = 26.6 bits (56), Expect = 8.1
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +3
Query: 186 DNCRDVIQCTASGIQAIRCPAGLFFDIEKQTC 281
++C+ + A G RCP G FD ++ C
Sbjct: 127 NDCKGMCHNQAGGYSCTRCPHGTSFDPAERKC 158
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,102,779
Number of Sequences: 37544
Number of extensions: 208907
Number of successful extensions: 763
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 762
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 766563072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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