Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32315
(421 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 36 0.009
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 36 0.009
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 33 0.083
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 31 0.25
U53153-7|AAC69037.1| 1280|Caenorhabditis elegans Hypothetical pr... 29 1.0
L14433-3|AAA27977.1| 2329|Caenorhabditis elegans Yeast prp (spli... 29 1.0
AF003135-8|AAK18984.1| 235|Caenorhabditis elegans Hypothetical ... 29 1.4
U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical p... 28 3.1
Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical pr... 28 3.1
AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical ... 28 3.1
AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical ... 28 3.1
Z70782-4|CAA94842.1| 347|Caenorhabditis elegans Hypothetical pr... 27 4.1
L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte upt... 27 4.1
AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein. 27 4.1
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 27 5.5
AC024746-13|AAF60407.2| 480|Caenorhabditis elegans Hypothetical... 27 7.2
Z81124-8|CAD56599.1| 426|Caenorhabditis elegans Hypothetical pr... 26 9.5
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 36.3 bits (80), Expect = 0.009
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 210 CTASGIQAIRCPAGLFFDIEKQTCDWKDAVKNXK 311
CT + + + CP LF+D + Q C WK V+ K
Sbjct: 158 CTTNTARFLSCPTPLFYDADSQKCIWKSLVEECK 191
Score = 27.1 bits (57), Expect = 5.5
Identities = 15/69 (21%), Positives = 25/69 (36%), Gaps = 1/69 (1%)
Frame = +3
Query: 204 IQCTASGIQAIRCPAGLFFDIEKQTCDW-KDAVKNXKLKNKERKIKPXLYTEXPLCQDGL 380
+ C+ + + CPA L F+ CDW +D + L + + Y C
Sbjct: 265 LTCSGGIARIMDCPASLVFNPTILVCDWPRDVAECAGLPTPQPTCEEDGYFSFGQCSSSF 324
Query: 381 LXCGDSTCI 407
C + I
Sbjct: 325 TACTNGRAI 333
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 36.3 bits (80), Expect = 0.009
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 210 CTASGIQAIRCPAGLFFDIEKQTCDWKDAVKNXK 311
CT + + + CP LF+D + Q C WK V+ K
Sbjct: 158 CTTNTARFLSCPTPLFYDADSQKCIWKSLVEECK 191
Score = 27.1 bits (57), Expect = 5.5
Identities = 15/69 (21%), Positives = 25/69 (36%), Gaps = 1/69 (1%)
Frame = +3
Query: 204 IQCTASGIQAIRCPAGLFFDIEKQTCDW-KDAVKNXKLKNKERKIKPXLYTEXPLCQDGL 380
+ C+ + + CPA L F+ CDW +D + L + + Y C
Sbjct: 265 LTCSGGIARIMDCPASLVFNPTILVCDWPRDVAECAGLPTPQPTCEEDGYFSFGQCSSSF 324
Query: 381 LXCGDSTCI 407
C + I
Sbjct: 325 TACTNGRAI 333
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 33.1 bits (72), Expect = 0.083
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 183 GDNCRDV-IQCTASGIQAIRCPAGLFFDIEKQTCDWKDAVKN 305
G +C D I C RCPAGLF+ CD+K+ V++
Sbjct: 797 GLDCEDYYISCNNFETTINRCPAGLFYSKLNNRCDYKEHVED 838
Score = 27.1 bits (57), Expect = 5.5
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 192 CRDVIQCTASG-IQAIRCPAGLFFDIEKQTCDWKDAVKN 305
C+ V A+G + A CPA L F+ CD+ V++
Sbjct: 587 CKSVFYICANGQVVATTCPANLIFNPYVGECDYSTNVRD 625
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/40 (27%), Positives = 18/40 (45%)
Frame = +3
Query: 195 RDVIQCTASGIQAIRCPAGLFFDIEKQTCDWKDAVKNXKL 314
+D +QC C GLF++ + C +K V K+
Sbjct: 904 QDYVQCMQGRSLISSCAPGLFYNEKNGMCAYKHTVDTCKI 943
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical
protein H02I12.1 protein.
Length = 1319
Score = 31.5 bits (68), Expect = 0.25
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 186 DNCRDVI-QCTASGIQAIRCPAGLFFDIEKQTCDWK 290
D C DV C+ + + CP G F+I +Q+CD++
Sbjct: 203 DGCNDVFYSCSNNMVFQRYCPPGTVFNINQQSCDFQ 238
Score = 31.5 bits (68), Expect = 0.25
Identities = 15/60 (25%), Positives = 23/60 (38%)
Frame = +3
Query: 120 GTRNYARTRYAGEWFRLVAGEGDNCRDVIQCTASGIQAIRCPAGLFFDIEKQTCDWKDAV 299
G N+ +T + +NC +C + CP+G F+ CDW AV
Sbjct: 1234 GCENHGQTNGECSEHGSFIADANNCEVFYRCVWGRKVVMTCPSGTVFNPLLSVCDWPSAV 1293
Score = 30.7 bits (66), Expect = 0.44
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 204 IQCTASGIQAIRCPAGLFFDIEKQTCDWKDAV 299
IQC+ S C L+FD Q+C ++D V
Sbjct: 802 IQCSDSAASVRECEGSLYFDERSQSCRFRDEV 833
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +3
Query: 204 IQCTASGIQAIRCPAGLFFDIEKQTCDWKDAV 299
IQC+ RC L+F+ Q C ++D V
Sbjct: 709 IQCSNGAAIVRRCGESLYFNEATQECTYRDEV 740
>U53153-7|AAC69037.1| 1280|Caenorhabditis elegans Hypothetical
protein T19A5.1 protein.
Length = 1280
Score = 29.5 bits (63), Expect = 1.0
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +1
Query: 184 ATTVATSSSVLPREYKLYVARPVCSSILRNRPAIGKML*KI 306
ATT+ S S P +Y+ +A P+ LRNRPAI + K+
Sbjct: 487 ATTMICSLSCTPEKYEESMA-PLREKTLRNRPAINETSWKV 526
>L14433-3|AAA27977.1| 2329|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 8 protein.
Length = 2329
Score = 29.5 bits (63), Expect = 1.0
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = -1
Query: 247 AGQRIACIPEAVHWMTSRQLS--PSPATSRNHSPAYLVLA 134
A + +A VHW+ SR+ S P P S H L+LA
Sbjct: 795 AEEAVAIYTTTVHWLESRRFSPIPFPPLSYKHDTKLLILA 834
>AF003135-8|AAK18984.1| 235|Caenorhabditis elegans Hypothetical
protein W03F11.1 protein.
Length = 235
Score = 29.1 bits (62), Expect = 1.4
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +3
Query: 189 NCRDVIQCTASGIQAIR-CPAGLFFDIEKQTCD 284
NC++ QC ASG+ R C G +D K TCD
Sbjct: 171 NCKNFYQC-ASGLWTQRSCGEGTIWDQHKLTCD 202
>U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical
protein R02F2.4 protein.
Length = 431
Score = 28.7 bits (61), Expect = 1.8
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +3
Query: 192 CRDVIQCTASGIQAIR-CPAGLFFDIEKQTCDWKDAVKNXKLKNKE 326
C +V + GI R CPA L F+ +CDW V + K+++
Sbjct: 190 CSNVFFSCSEGIAHRRNCPANLVFNPAISSCDWPKNVMDCSEKSEK 235
Score = 26.6 bits (56), Expect = 7.2
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +3
Query: 192 CRDVIQCTASGIQAIR-CPAGLFFDIEKQTCDWKDAVKNXKLKN 320
C +GI + CP GL F + Q CD++ V L++
Sbjct: 251 CSSSFSACTNGIPIVMFCPDGLMFSEKNQMCDYEWNVDECDLES 294
>Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical protein
T06D8.1b protein.
Length = 3653
Score = 27.9 bits (59), Expect = 3.1
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = +3
Query: 69 TDGGDKLTSTAXKDESLGTRNYARTRYAGEWFRLVAGEGDNCRDVIQCTASG 224
T+ + +TST +DE++ ++A + +L A +G N + SG
Sbjct: 2982 TESAENVTSTGEEDENIKMAKELGKQFAADLAKLAAKDGVNLTETADAKDSG 3033
>Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical protein
T06D8.1a protein.
Length = 3719
Score = 27.9 bits (59), Expect = 3.1
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = +3
Query: 69 TDGGDKLTSTAXKDESLGTRNYARTRYAGEWFRLVAGEGDNCRDVIQCTASG 224
T+ + +TST +DE++ ++A + +L A +G N + SG
Sbjct: 2982 TESAENVTSTGEEDENIKMAKELGKQFAADLAKLAAKDGVNLTETADAKDSG 3033
>Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical
protein T06D8.1b protein.
Length = 3653
Score = 27.9 bits (59), Expect = 3.1
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = +3
Query: 69 TDGGDKLTSTAXKDESLGTRNYARTRYAGEWFRLVAGEGDNCRDVIQCTASG 224
T+ + +TST +DE++ ++A + +L A +G N + SG
Sbjct: 2982 TESAENVTSTGEEDENIKMAKELGKQFAADLAKLAAKDGVNLTETADAKDSG 3033
>Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical protein
T06D8.1a protein.
Length = 3719
Score = 27.9 bits (59), Expect = 3.1
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = +3
Query: 69 TDGGDKLTSTAXKDESLGTRNYARTRYAGEWFRLVAGEGDNCRDVIQCTASG 224
T+ + +TST +DE++ ++A + +L A +G N + SG
Sbjct: 2982 TESAENVTSTGEEDENIKMAKELGKQFAADLAKLAAKDGVNLTETADAKDSG 3033
>AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical
protein T06D8.1b protein.
Length = 3653
Score = 27.9 bits (59), Expect = 3.1
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = +3
Query: 69 TDGGDKLTSTAXKDESLGTRNYARTRYAGEWFRLVAGEGDNCRDVIQCTASG 224
T+ + +TST +DE++ ++A + +L A +G N + SG
Sbjct: 2982 TESAENVTSTGEEDENIKMAKELGKQFAADLAKLAAKDGVNLTETADAKDSG 3033
>AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical
protein T06D8.1a protein.
Length = 3719
Score = 27.9 bits (59), Expect = 3.1
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = +3
Query: 69 TDGGDKLTSTAXKDESLGTRNYARTRYAGEWFRLVAGEGDNCRDVIQCTASG 224
T+ + +TST +DE++ ++A + +L A +G N + SG
Sbjct: 2982 TESAENVTSTGEEDENIKMAKELGKQFAADLAKLAAKDGVNLTETADAKDSG 3033
>Z70782-4|CAA94842.1| 347|Caenorhabditis elegans Hypothetical
protein R04B5.6 protein.
Length = 347
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/50 (24%), Positives = 22/50 (44%)
Frame = -3
Query: 218 GSTLDDVATVVALAGHQPEPFAGVPCPCIVPCSQAFIFXCRTRQLVAAIG 69
G D+V + + A +P + C + PC + I R+ +V +G
Sbjct: 222 GKRSDEVRSEIIKAFGDQQPHVSIECTGVQPCVETAIMTTRSGGVVVLVG 271
>L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte uptake
defective protein4 protein.
Length = 433
Score = 27.5 bits (58), Expect = 4.1
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = -3
Query: 251 TGRATYSLYSRGSTLDDVATVVALAGHQPEPFAGVPCPCIVPCS 120
T A + + GST +A V+ H P A V PCIV S
Sbjct: 251 TSSAPITGFDLGSTWSMLAVTVSFVRHSPLFEAAVVTPCIVVAS 294
>AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein.
Length = 433
Score = 27.5 bits (58), Expect = 4.1
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = -3
Query: 251 TGRATYSLYSRGSTLDDVATVVALAGHQPEPFAGVPCPCIVPCS 120
T A + + GST +A V+ H P A V PCIV S
Sbjct: 251 TSSAPITGFDLGSTWSMLAVTVSFVRHSPLFEAAVVTPCIVVAS 294
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 27.1 bits (57), Expect = 5.5
Identities = 14/45 (31%), Positives = 17/45 (37%)
Frame = +3
Query: 177 GEGDNCRDVIQCTASGIQAIRCPAGLFFDIEKQTCDWKDAVKNXK 311
G +C I+C CP GL F + CD D K K
Sbjct: 573 GVPSDCLKFIRCVNGISYNFECPNGLSFHADTMMCDRPDPSKCAK 617
>AC024746-13|AAF60407.2| 480|Caenorhabditis elegans Hypothetical
protein Y110A2AL.12a protein.
Length = 480
Score = 26.6 bits (56), Expect = 7.2
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -3
Query: 347 QXRLYFTLLVLELXIFHSIFPIAGLFLNIEEQTGRATYSL 228
Q L+ T L+ L +F + +FL TGR TY L
Sbjct: 24 QRELFLTFLITMLGLFIRNLTLPWIFLGRRYDTGRFTYWL 63
>Z81124-8|CAD56599.1| 426|Caenorhabditis elegans Hypothetical
protein T21B4.14 protein.
Length = 426
Score = 26.2 bits (55), Expect = 9.5
Identities = 10/38 (26%), Positives = 20/38 (52%)
Frame = -3
Query: 341 RLYFTLLVLELXIFHSIFPIAGLFLNIEEQTGRATYSL 228
R ++ + + + F IFP+ ++ N+ EQT + L
Sbjct: 226 RNFYKTIWISVNFFGRIFPLTPIYFNLPEQTAAKMHIL 263
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,990,914
Number of Sequences: 27780
Number of extensions: 153827
Number of successful extensions: 559
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 559
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 682028672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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