Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32313
         (476 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0593 + 22596372-22596384,22596856-22597037,22597119-225973...    28   3.4  
03_05_0868 + 28385066-28385478,28386050-28386167,28386365-283867...    28   4.5  
02_02_0511 + 11072699-11073146,11076148-11076365                       27   5.9  
07_03_0681 + 20659789-20659839,20660030-20660170,20661294-206613...    27   7.8  

>06_03_0593 +
           22596372-22596384,22596856-22597037,22597119-22597344,
           22597429-22597855,22598075-22598429,22598511-22599089
          Length = 593

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = -1

Query: 161 CXILRQPMLSLSLYDXDSVGIRADWXSDSYGDEESDN 51
           C IL   +L   +   D V + +DW SDS  DEESD+
Sbjct: 226 CCILHNWILQFGM--DDHVPLESDWNSDS-DDEESDD 259


>03_05_0868 +
           28385066-28385478,28386050-28386167,28386365-28386726,
           28389308-28389406,28389485-28389890
          Length = 465

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +3

Query: 99  DADAVXIIQGQRQHWLSKDTTPAMKPPTXSR 191
           D++ V   +GQR+H +SK  TPA +  T  R
Sbjct: 431 DSEDVLPYEGQRRHIVSKRATPAQRRFTAGR 461


>02_02_0511 + 11072699-11073146,11076148-11076365
          Length = 221

 Score = 27.5 bits (58), Expect = 5.9
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -2

Query: 166 AGVVSFDSQCCRCPCM 119
           AG V+ DS CC  PCM
Sbjct: 149 AGFVNIDSSCCPGPCM 164


>07_03_0681 +
           20659789-20659839,20660030-20660170,20661294-20661399,
           20661625-20661806,20661888-20662113,20662198-20662624,
           20662844-20663189,20663271-20663849
          Length = 685

 Score = 27.1 bits (57), Expect = 7.8
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -1

Query: 161 CXILRQPMLSLSLYDXDSVGIRADWXSDSYGDEESDNEE 45
           C IL   +L   +   D V + +DW SDS  +E  D +E
Sbjct: 321 CCILHNWILQFGM--DDHVPLESDWNSDSDDEEPDDLDE 357


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,957,467
Number of Sequences: 37544
Number of extensions: 129586
Number of successful extensions: 276
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 276
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 979080328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)