Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32310
(516 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 73 3e-14
SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces pomb... 36 0.003
SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyce... 35 0.006
SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 35 0.008
SPAC18B11.04 |ncs1||related to neuronal calcium sensor Ncs1|Schi... 28 0.72
SPAC22F8.11 |plc1||phosphoinositide phospholipase C Plc1|Schizos... 27 1.7
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 25 6.7
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 25 6.7
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 25 6.7
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 25 6.7
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 25 6.7
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 25 6.7
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 25 6.7
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 25 6.7
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 25 6.7
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 25 6.7
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 25 6.7
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 72.5 bits (170), Expect = 3e-14
Identities = 40/143 (27%), Positives = 73/143 (51%)
Frame = +1
Query: 76 QXIXVLRKAFDGFDHNRSGSIPCDFXADILRMMGQPFNKKILEELIEEVDAXKSGRLEFP 255
+ I R+AF FD ++ G+I + ++R +GQ L+++I EVDA +G ++F
Sbjct: 9 EQIAEFREAFSLFDRDQDGNITSNELGVVMRSLGQSPTAAELQDMINEVDADGNGTIDFT 68
Query: 256 EFVTLAAXFIGEEDAEAMQKELXEAFRLYXKEXNGCIPTXSLREIXXXXXXXXXXXXXXX 435
EF+T+ A + + D E +E+ EAF+++ K+ NG I L +
Sbjct: 69 EFLTMMARKMKDTDNE---EEVREAFKVFDKDGNGYITVEELTHVLTSLGERLSQEEVAD 125
Query: 436 XIQEIXTDGSXTVDFYXFMEMMT 504
I+E TDG +++ F +++
Sbjct: 126 MIREADTDGDGVINYEEFSRVIS 148
>SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 141
Score = 36.3 bits (80), Expect = 0.003
Identities = 26/99 (26%), Positives = 47/99 (47%)
Frame = +1
Query: 94 RKAFDGFDHNRSGSIPCDFXADILRMMGQPFNKKILEELIEEVDAXKSGRLEFPEFVTLA 273
++AF FD + +G IP D+LR GQ N + E I E+++ ++ +F+ +
Sbjct: 9 KQAFSLFDRHGTGRIPKTSIGDLLRACGQ--NPTLAE--ITEIESTLPAEVDMEQFLQVL 64
Query: 274 AXFIGEEDAEAMQKELXEAFRLYXKEXNGCIPTXSLREI 390
G D +E + F+++ K+ G I LR +
Sbjct: 65 NRPNG-FDMPGDPEEFVKGFQVFDKDATGMIGVGELRYV 102
>SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 174
Score = 35.1 bits (77), Expect = 0.006
Identities = 29/106 (27%), Positives = 46/106 (43%)
Frame = +1
Query: 64 SCPQQXIXVLRKAFDGFDHNRSGSIPCDFXADILRMMGQPFNKKILEELIEEVDAXKSGR 243
S + I +RK F D N+SGSI + I + P + L VD G
Sbjct: 17 SFSNEEIERIRKRFIKIDANQSGSIDRNEFLSIPSVASNP----LASRLFSVVDEDGGGD 72
Query: 244 LEFPEFVTLAAXFIGEEDAEAMQKELXEAFRLYXKEXNGCIPTXSL 381
++F EF+ + F + E ++L AF++Y + +G I L
Sbjct: 73 VDFQEFINSLSVFSVHGNKE---EKLKFAFKIYDIDRDGYISNGEL 115
>SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 34.7 bits (76), Expect = 0.008
Identities = 15/60 (25%), Positives = 32/60 (53%)
Frame = +1
Query: 91 LRKAFDGFDHNRSGSIPCDFXADILRMMGQPFNKKILEELIEEVDAXKSGRLEFPEFVTL 270
+++AF+ FD + +G I + + + + + + LE +IEE D + G + EF+ +
Sbjct: 112 IKRAFELFDDDETGKISLRNLRRVAKELNENIDDQELEAMIEEFDLDQDGEINEQEFIAI 171
>SPAC18B11.04 |ncs1||related to neuronal calcium sensor
Ncs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 190
Score = 28.3 bits (60), Expect = 0.72
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 202 EELIEEVDAXKSGRLEFPEFV-TLAAXFIGEEDAEAMQKELXEAFRLYXKEXNGCI 366
E + DA K+G ++F EF+ L+ GE + +L AF+LY + NG I
Sbjct: 66 EYVFNVFDADKNGYIDFKEFICALSVTSRGE-----LNDKLIWAFQLYDLDNNGLI 116
>SPAC22F8.11 |plc1||phosphoinositide phospholipase C
Plc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 899
Score = 27.1 bits (57), Expect = 1.7
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 193 KILEELIEEVDAXKSGRLEFPEF 261
+ LEE ++ DA SG+L F EF
Sbjct: 333 EFLEETFQKADADHSGKLSFEEF 355
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.0 bits (52), Expect = 6.7
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +1
Query: 103 FDGFDHNRSGSIPCDFXADILRMMGQPFNKKILEELIEEVD 225
F G+ + G PC D + QP N+K L + + V+
Sbjct: 610 FIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVN 650
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 25.0 bits (52), Expect = 6.7
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +1
Query: 103 FDGFDHNRSGSIPCDFXADILRMMGQPFNKKILEELIEEVD 225
F G+ + G PC D + QP N+K L + + V+
Sbjct: 610 FIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVN 650
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.0 bits (52), Expect = 6.7
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +1
Query: 103 FDGFDHNRSGSIPCDFXADILRMMGQPFNKKILEELIEEVD 225
F G+ + G PC D + QP N+K L + + V+
Sbjct: 610 FIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVN 650
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.0 bits (52), Expect = 6.7
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +1
Query: 103 FDGFDHNRSGSIPCDFXADILRMMGQPFNKKILEELIEEVD 225
F G+ + G PC D + QP N+K L + + V+
Sbjct: 610 FIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVN 650
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 25.0 bits (52), Expect = 6.7
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +1
Query: 103 FDGFDHNRSGSIPCDFXADILRMMGQPFNKKILEELIEEVD 225
F G+ + G PC D + QP N+K L + + V+
Sbjct: 610 FIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVN 650
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.0 bits (52), Expect = 6.7
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +1
Query: 103 FDGFDHNRSGSIPCDFXADILRMMGQPFNKKILEELIEEVD 225
F G+ + G PC D + QP N+K L + + V+
Sbjct: 610 FIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVN 650
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.0 bits (52), Expect = 6.7
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +1
Query: 103 FDGFDHNRSGSIPCDFXADILRMMGQPFNKKILEELIEEVD 225
F G+ + G PC D + QP N+K L + + V+
Sbjct: 610 FIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVN 650
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 25.0 bits (52), Expect = 6.7
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +1
Query: 103 FDGFDHNRSGSIPCDFXADILRMMGQPFNKKILEELIEEVD 225
F G+ + G PC D + QP N+K L + + V+
Sbjct: 610 FIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVN 650
>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 25.0 bits (52), Expect = 6.7
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +1
Query: 103 FDGFDHNRSGSIPCDFXADILRMMGQPFNKKILEELIEEVD 225
F G+ + G PC D + QP N+K L + + V+
Sbjct: 610 FIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVN 650
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.0 bits (52), Expect = 6.7
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +1
Query: 103 FDGFDHNRSGSIPCDFXADILRMMGQPFNKKILEELIEEVD 225
F G+ + G PC D + QP N+K L + + V+
Sbjct: 610 FIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVN 650
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 25.0 bits (52), Expect = 6.7
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +1
Query: 103 FDGFDHNRSGSIPCDFXADILRMMGQPFNKKILEELIEEVD 225
F G+ + G PC D + QP N+K L + + V+
Sbjct: 610 FIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVN 650
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,557,476
Number of Sequences: 5004
Number of extensions: 22895
Number of successful extensions: 76
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 75
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 208287218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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